BGIOSGA021479

From RiceWiki
Revision as of 13:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021479| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021479, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021479

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021479, complete gene.

LocusTag

OSJNBA0084K06.11

Ensembl Transcript ID

BGIOSGA021479-TA

Ensembl Protein ID

BGIOSGA021479-PA

Length

3716

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:9903601..9907316

Sequence Coding Region

9907205..9907316,9907024..9907107),complement(9906733..9906915,9906015..9906185),complement(9904968..9905177
,9904698..9904786),complement(9903601..9904305

Genome Context

<gbrowseImage1> name=IndicaChromosome06:9903601..9907316 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:9903601..9907316 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTAAGGAGGAGGAGGAGGAGGAGTAGAGCCGCGGCGGTTCTGGTGGCCGCGCTGCTTCTCGCCGCCTCCGCCGCCACCGCCTCCGCGGCGTCGTCTTACCCCGCGAAGGTGGTGACCGGGTTGCTGTCCAGCACGGCGTCGGCGGTGGTGAAGCAGCTCTGGTCGCTCAAATCGACCGCCACAAGGACGGGGTCGGCGGCGGCGGGGAGGTCGATGGTGAAGTACGAGGGCGGGTACGCGGTGGAGACGGTGTTCGACGGCAGCAAGCTGGGGATCGAGCCGCACGACGTCGAGGTCACCCCCTCCGGCGAGCTCCTCGTGCTCGACTCCATGAACAGCAACGTCTACAGGGTCCAGCTGCCTCTGTCGCGATATAGCAGACCGAAGCTTGTTGCTGGTTCGCCGGAAGGATTATCCGGCCATGTCGACGGGAGGCTGCGGGAGGCGAAGATGAACCATCCGAAGGGATTTACAGTGGACGATAGGGGAAACATTTATGTTGCAGATGCTATGAATATGGCAATAAGAAAGATCAGTGATACAGGGGTTACAACCATTGCTGGGGGGAAATCAATGAGAGGTGGGCACCTAGATGGGCCAAGTGATGATGCAAAATTTTCTACTGATTTTGAAATTCGCTACATCAGCAGTAGCTGCTCCCTCTTGGTTATTGATAGAGGAAACCAAGCAATTCGCGAGATTGCACTCCACAATGATGACTGTGAATATCAGTATGAAGCTGGTTTTCCACTAGGCATTGCATTGCTTTTTGCTGCTGGTTTCTTTGGGTACATGCTTGCATTGCTTCAGCGACAGGTTTTAGGGATGGTATCAACAGCAGATGAACCTCAGACTCCTCCAAGACCCAGCATTGCAAGCATCCCTCCATATCAGAAGCCACTAAAGCCTTCGCTTCGGCCTCCACTGATCCCAACCGAAGATCAAGCTGGGAAACATGAGGCTGAAGAGGGGTTCTTCACCTCAATCGGCAAGCTCATCGGAGGAGCAAAATCATCTGCGGTAGAGATATTCTCACGAAAGAAACGCCCAACCCATCAGTACCATCATCACCTTCAGCAGCAAAGAGCCAACCCTTGGCCGGTGCAAGAAAGTTACGCCATCCCACATGATGAGACACCGCCACCATTGGACATGAGAGCAGCTACTCCTCGGAAGAACTACGCCTTCATGACGAAGGAGCCTGAAAAAGTTCACCATGTCTGCCATGGCCGGCCTTACTTCAACGGCTGGGACATGCAGCATGCCCCTCAGCAACAGCCAGAGCAGCAGATGTACCACCAGCAGCACCTGCAGCAGCACAGGCAGTACTCCGCAGGCCCGCAAACTTTCTACGAGCAGAGCTGCGAGACGACAAACGAGATCGTCTTTGGTGCTGTCCAGGAGGTGGACACCAAGCGGCGAATGGTGGAGATCAAGGCCGTGAACTATGGGGACACATTCTATGAGCAGTACGGGATGCGGTATCGCAACAATTACATCGGCTACAACAACAGCAGCAACGGCAACAACAACAGCTACTACTATTAA</cdnaseq>

Protein Sequence

<aaseq>MAVRRRRRRSRAAAVLVAALLLAASAATASAASSYPAKVVTGLLSSTASAVVKQLWSLKSTATRTGSAAAGRSMVKYEGGYAVETVFDGSKLGIEPHDVEVTPSGELLVLDSMNSNVYRVQLPLSRYSRPKLVAGSPEGLSGHVDGRLREAKMNHPKGFTVDDRGNIYVADAMNMAIRKISDTGVTTIAGGKSMRGGHLDGPSDDAKFSTDFEIRYISSSCSLLVIDRGNQAIREIALHNDDCEYQYEAGFPLGIALLFAAGFFGYMLALLQRQVLGMVSTADEPQTPPRPSIASIPPYQKPLKPSLRPPLIPTEDQAGKHEAEEGFFTSIGKLIGGAKSSAVEIFSRKKRPTHQYHHHLQQQRANPWPVQESYAIPHDETPPPLDMRAATPRKNYAFMTKEPEKVHHVCHGRPYFNGWDMQHAPQQQPEQQMYHQQHLQQHRQYSAGPQTFYEQSCETTNEIVFGAVQEVDTKRRMVEIKAVNYGDTFYEQYGMRYRNNYIGYNNSSNGNNNSYYY</aaseq>

Gene Sequence

<dnaseqindica>1..112#210..293#402..584#1132..1302#2140..2349#2531..2619#3012..3716#ATGGCGGTAAGGAGGAGGAGGAGGAGGAGTAGAGCCGCGGCGGTTCTGGTGGCCGCGCTGCTTCTCGCCGCCTCCGCCGCCACCGCCTCCGCGGCGTCGTCTTACCCCGCGAGTAAGCGAGCGAGCAAGCTCTCGGTTTCTTCTTGGTTTTTGGTGTTCTACTGTTTCTTGGCTGAATTCGTGTGTTTTTTTGGGATGGTTGGTGGCAGAGGTGGTGACCGGGTTGCTGTCCAGCACGGCGTCGGCGGTGGTGAAGCAGCTCTGGTCGCTCAAATCGACCGCCACAAGGACGGGTAATTCGTCTGCTCCTCCTCCTTGGAGAAAAGAAATTTCAGTTCTTGTGTGTGCGCTTCTTCCGGTTTCTTGACCGGATTATTGACGGTGGTCGGCGGCGGCGGCAGGGTCGGCGGCGGCGGGGAGGTCGATGGTGAAGTACGAGGGCGGGTACGCGGTGGAGACGGTGTTCGACGGCAGCAAGCTGGGGATCGAGCCGCACGACGTCGAGGTCACCCCCTCCGGCGAGCTCCTCGTGCTCGACTCCATGAACAGCAACGTCTACAGGGTCCAGCTGCCTCTGTCGCGATGTGAGCATTGCTAGCTCTTCTTCCTTCCTTCCTTCCTACTACTAGCTTTTCAGCTCTGACTCACAGTCTTCTTCATGGGATTCTGCTAACTAGTACTACTTTATGATGATTGTCAACTCGATGATGTGAGGCTGTGAGTTTGGTTTGGTTGGTCAGTTTGTGATTGATGATGTTTGCATGCTAGATTTTGGTCCAGGCTAGTTTGTTTGTTGATTGCGAAATGTTTGTTAGTTTCTTGTTTGCAATTATAGGTTATGATGTGATTGTGCTTTGCTACTTGGTCACTTTCACTCCCATTGTTTAGGGAAAGATGACACTGGAGTTGTCCTCTATCTTAGGATTTGACTAAACAGGAACCTGAAAAATCATTGGTGAAATGAAATACAGCGTAATTTGTTTGTCCAAATTAGTACAAAAGCTTCACTATCTGATGTTTTTTTTTAAGGCACTGTACGAAAAATCGGTGTCGACATTTTACTTATCAATTGACGCATTTGAGATCACCAGATTCTGATGTATCTTGTAAAAAATGGATCAAACATTACAGATAGCAGACCGAAGCTTGTTGCTGGTTCGCCGGAAGGATTATCCGGCCATGTCGACGGGAGGCTGCGGGAGGCGAAGATGAACCATCCGAAGGGATTTACAGTGGACGATAGGGGAAACATTTATGTTGCAGATGCTATGAATATGGCAATAAGAAAGATCAGTGATACAGGTAAGCTAAAGTGTCTCTTATATGGGGTTGTTGCACATGATACTGTCTGGTCCCCAAGCATCCTATGTTTGCTATTTGGTTTTCATTGTAACTCTTCAGCACTTGTGTCCAAAGGTGCATTTGAAACAAGTTGTCAGAGTGCATGGAAAGGTCATACCCACAGTTTTAAATGCCAAAATGATAGTCTAAGTGGGGTGTGATCCATGGAAGTGTTTGTGGAATCGTGGTTATAAAACTTTCTAATCAGCATTTGTCTTATTTACAATGTCCCCAAGTTTTCAGAAATCATGACATCCTAACAGTTATGTGACTATTGATGTCAGAAAATTGAGTATCACTTGCTTTTGCAAGTTGCAACAGTGGAAGAGATGTCACACATTGAAATGAACCTCAAAGTGGACAGGAAGATTACATGATTGGACTTTATATACTAGAATGATCTCACTCTTGATATATAGTGATGTCTGTAACCCATGACATCATATTTACTCATTGAGATTGGGTATGTTATGAGTGTGTTATAGACTTGTAGTGCACTTATAATGCACTTATGCACATGCAGCCATGCACAAAACATTTTGTATATTTGTAAGGTAGATTTCTTTTTCGTATGAAAATTTATTTATATGCTTGCTTTTAATATCTCTATCCATTTTAAATTCTTCAAGTATACATTTTTTTTCTTTTAATTAATTAATTTATCTGTTCTGAAGGAACTTCATATTTGAGTTTTCCTTCTGATGAACTTTGTTTGGACTTCTGGAAGGGCCTAGCATGCATATTATTCACTTAGTCATGTAAATCAAAATGTCTCTGACAAACCGCTTTTATATGCAGGGGTTACAACCATTGCTGGGGGGAAATCAATGAGAGGTGGGCACCTAGATGGGCCAAGTGATGATGCAAAATTTTCTACTGATTTTGAAATTCGCTACATCAGCAGTAGCTGCTCCCTCTTGGTTATTGATAGAGGAAACCAAGCAATTCGCGAGATTGCACTCCACAATGATGACTGTGAATATCAGTATGAAGCTGGTTTTCCACTAGGTGCATCTACATTACAATAAGCTTTCTATTAGTACTTCTTGACCAGACAATATTGTTGTCCCATTTTCTTTTTAAACAAAAATCGTCTCAGATCTACACATTTAGTCGAATGACCTACATATTATATAGATAAGGGCATGTTAAAACTGTGGACATTAACCATTTGAGTTTGAATTCACAGGCATTGCATTGCTTTTTGCTGCTGGTTTCTTTGGGTACATGCTTGCATTGCTTCAGCGACAGGTTTTAGGGATGGTATCAACAGCAGATGTAAGTGCTTCATTTTGTTGCGTTATTATGCGAACAAAAATATTGTTTACGTTTTTTCGAAGCACAAGAAATGTAAGGCCAAGAACTATAAGAGCACAGTCCACAGTTGTACTATAAACAATGAATACAGACCTCAAGTAGATCATGGTACAGCTTTAAAATGAAATAAGTAGTTCCATTTACTCTGAATAACCATAGGTGCATTGTTTCAAGGACACTGAAAAGGTAACATACAAAATAAAGTAATACAATCAATTTTGTTGTACCTCTAGAGTGTAGACTCTAGACCAATGGTAAAGCAAAGACGAATACCATACATGTTCTCTTGCCCGCTTTGTTTTTATTTCTAATTTCATCGCCACCTTATTTTGTATGGAAATTTGACCGTACAGGAACCTCAGACTCCTCCAAGACCCAGCATTGCAAGCATCCCTCCATATCAGAAGCCACTAAAGCCTTCGCTTCGGCCTCCACTGATCCCAACCGAAGATCAAGCTGGGAAACATGAGGCTGAAGAGGGGTTCTTCACCTCAATCGGCAAGCTCATCGGAGGAGCAAAATCATCTGCGGTAGAGATATTCTCACGAAAGAAACGCCCAACCCATCAGTACCATCATCACCTTCAGCAGCAAAGAGCCAACCCTTGGCCGGTGCAAGAAAGTTACGCCATCCCACATGATGAGACACCGCCACCATTGGACATGAGAGCAGCTACTCCTCGGAAGAACTACGCCTTCATGACGAAGGAGCCTGAAAAAGTTCACCATGTCTGCCATGGCCGGCCTTACTTCAACGGCTGGGACATGCAGCATGCCCCTCAGCAACAGCCAGAGCAGCAGATGTACCACCAGCAGCACCTGCAGCAGCACAGGCAGTACTCCGCAGGCCCGCAAACTTTCTACGAGCAGAGCTGCGAGACGACAAACGAGATCGTCTTTGGTGCTGTCCAGGAGGTGGACACCAAGCGGCGAATGGTGGAGATCAAGGCCGTGAACTATGGGGACACATTCTATGAGCAGTACGGGATGCGGTATCGCAACAATTACATCGGCTACAACAACAGCAGCAACGGCAACAACAACAGCTACTACTATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021479

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021479&oldid=44004"