BGIOSGA021517

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Revision as of 13:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021517| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021517, complete gene.| tag = P0046H1...")
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Gene Name

BGIOSGA021517

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021517, complete gene.

LocusTag

P0046H10.45

Ensembl Transcript ID

BGIOSGA021517-TA

Ensembl Protein ID

BGIOSGA021517-PA

Length

3221

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:9049717..9052937

Sequence Coding Region

9052886..9052937,9051895..9052766),complement(9049717..9049971

Genome Context

<gbrowseImage1> name=IndicaChromosome06:9049717..9052937 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:9049717..9052937 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCTCGCTCGCAAGCCCATGCCTCCAAGTAGCTTCATCATGACCACAATTCGTCATCAAGCCGGCGAGGCGGCGACCGTGGCGTCCTCCGCCGCCGCCGCGACGGCAACGGACCGCGCCGCCCTCGTCAAGGCCTTCGACGAGACACGCACCGGCGTCCGCGGCCTCGTCGAGTCCGGTGTCTCCGCCGTCCCGGACATCTTCCGCCACCCCGACCCCTACGCCTCCGTCCCGCTCGCTCCACCCGGCGTCTCCATCCCCGTCGTCGACCTCTCCCTCCCCGCGCCGCTCGCCGCCGAGGCCGCGGCGGGGGCGGCGCGCGAGTGGGGTTTCTTCTACCTCGTCAACCACCACGACCTCGTCCCCCCCGGCTTCACCGACGGGCTCCTCGCCGCCACGCGCGCCTTCCACGAGCTCCCCGCCGCGGAGCGCGCCGCGCACTACGGCCGCTCCGTGGACGGCGGGGTGGACTACTTCTCCAACTTCGACCTGTACCGGTCCGGCGCCGCGAGCTGGCGCGACACCATCAAGGTCACGTTCGGGCCCTCGCGCCCCGACACGGGGCGCATCCCGGCGGCGTGCCGCGCCGAGGTCGTCGGCTGGGACGCGCACGCCACCGCCGTGGCCCGCGCCGTCATGGCGCTGCTCTGCGAGGGGCTCGGCCTCCGCGGCGAGACGCTGGAGGAGGCCTCCTGCCTCGAGGGGAGAGTGATGGTGTGCCACTACTACCCGGTGTGCCCTGAGCCCGAGCGCACCATGGGGATCGTCCCGCACACGGACCCCGTCGTGCTCACCATCCTCGCGCAGGATGGTGTCGGTGGCCTGCAGGTGAAGCACACGAACGAGGATGGGGAGAGCTACTGGGTGGATGCGAAGCCTGTGCCCGGTGCTCTTATGATCAATGTTGGGGACCTATTGCAGATAATGTCTAATGATAAGTACAAGAGCGTGGAACACCGGGTAGTAATGAATTCACATGAAGAAGCCAGAGTTTCAAGTGCCATCTTCTACAATCCTGGCAAGAGAGGGGACTCAGTTTTTTATGGACCATTGCCAGAGCTGGTTTCTTCGGAAAACCCGCCAAAGTACAGGAATTTTACTATGCCTGAGTTTTTGGGGACCTTCTTTAAACGAGAGCTTGCGAGCAATGCTCTTATCGAGCACTTCAAAATATGA</cdnaseq>

Protein Sequence

<aaseq>MPLARKPMPPSSFIMTTIRHQAGEAATVASSAAAATATDRAALVKAFDETRTGVRGLVESGVSAVPDIFRHPDPYASVPLAPPGVSIPVVDLSLPAPLAAEAAAGAAREWGFFYLVNHHDLVPPGFTDGLLAATRAFHELPAAERAAHYGRSVDGGVDYFSNFDLYRSGAASWRDTIKVTFGPSRPDTGRIPAACRAEVVGWDAHATAVARAVMALLCEGLGLRGETLEEASCLEGRVMVCHYYPVCPEPERTMGIVPHTDPVVLTILAQDGVGGLQVKHTNEDGESYWVDAKPVPGALMINVGDLLQIMSNDKYKSVEHRVVMNSHEEARVSSAIFYNPGKRGDSVFYGPLPELVSSENPPKYRNFTMPEFLGTFFKRELASNALIEHFKI</aaseq>

Gene Sequence

<dnaseqindica>1..52#172..1043#2967..3221#ATGCCGCTCGCTCGCAAGCCCATGCCTCCAAGTAGCTTCATCATGACCACAAGTACAACTGCTGCTGCTACCATCCAAATGTTTCTGGTGTAGATGCAATTCTCTCTTGATTTTTTTCTCTCCCTCAATTCTGTTCTGTTATCTGTCTCAATCCACACGAAAGCTATCCAGTTCGTCATCAAGCCGGCGAGGCGGCGACCGTGGCGTCCTCCGCCGCCGCCGCGACGGCAACGGACCGCGCCGCCCTCGTCAAGGCCTTCGACGAGACACGCACCGGCGTCCGCGGCCTCGTCGAGTCCGGTGTCTCCGCCGTCCCGGACATCTTCCGCCACCCCGACCCCTACGCCTCCGTCCCGCTCGCTCCACCCGGCGTCTCCATCCCCGTCGTCGACCTCTCCCTCCCCGCGCCGCTCGCCGCCGAGGCCGCGGCGGGGGCGGCGCGCGAGTGGGGTTTCTTCTACCTCGTCAACCACCACGACCTCGTCCCCCCCGGCTTCACCGACGGGCTCCTCGCCGCCACGCGCGCCTTCCACGAGCTCCCCGCCGCGGAGCGCGCCGCGCACTACGGCCGCTCCGTGGACGGCGGGGTGGACTACTTCTCCAACTTCGACCTGTACCGGTCCGGCGCCGCGAGCTGGCGCGACACCATCAAGGTCACGTTCGGGCCCTCGCGCCCCGACACGGGGCGCATCCCGGCGGCGTGCCGCGCCGAGGTCGTCGGCTGGGACGCGCACGCCACCGCCGTGGCCCGCGCCGTCATGGCGCTGCTCTGCGAGGGGCTCGGCCTCCGCGGCGAGACGCTGGAGGAGGCCTCCTGCCTCGAGGGGAGAGTGATGGTGTGCCACTACTACCCGGTGTGCCCTGAGCCCGAGCGCACCATGGGGATCGTCCCGCACACGGACCCCGTCGTGCTCACCATCCTCGCGCAGGATGGTGTCGGTGGCCTGCAGGTGAAGCACACGAACGAGGATGGGGAGAGCTACTGGGTGGATGCGAAGCCTGTGCCCGGTGCTCTTATGATCAATGTTGGGGACCTATTGCAGGTAAAATTCATTCAATTGGTACCTAAACTCCCAAATTCGATCCGTAGTCGGTTCGGTTGAATTCATCTCATATGTATTTGAATTGGGGCCTCATCGTTTGCCCTATAGCTTATAAGCCAAAGCCAAAATTTGAATTTAAAAACTTGAATTTGAATTTGATTTTTTTCAACATAGTTTTTTTTTAACTTTGGCTTTTCAATCACTAAGAACATATATACAAAAGTTTTACTCACATATCATTTTATAAACGCTAATAAGCCGCTATGGCTTATAATAAGCCTAGACCAACCGATGGGGACCTTGCACTCCTGGCATATTAAGGATGTTTTTGACGAAATTTGTTACATTCAACATCAATTAGAAACAAAGCAACTGCTCCTGGTACTGAAATTTGTGCATAGGTTAGCTTTATACTGTGAGACTTAAATTGGTTAAAAAGAATTAAAACACAAGAAAATGTTCAGTTTCATGGTATGAGTAAGAATACGTTTTTGTGGTTCCGCAGCATGGTCGTATAAACCTTTAGCACTGTGGTAGGCCATGATTAAAACACTCTACCCTGTGATAGCTCCATAGCCGTTGGATTGTGTGCAACTGTTATCATTTTGCCTGCATGTCCAGCTTAACTGTTGAAAATACAAAATATCATTTCTCGTGTAATCATATTCTCCAGATTTTTGAAATGAATTTGTTCTCAGGTTTTAACTGTCTAAAGAAAGATGCATATTTTTGTCTCTAAACCTTGCAAATCAGAGGAGCTATTACTCCAGATCTCCTACTGATTCCAACTTAGATAGCCATCTTATATAAGTCCACATATATAATGATGCCTTAGTGATCCCCATATTCACACATATAAATGAAGATGCCAATATCCCACCCACATAATTACACAATCACTAGTTGTGAATATGCCATGAAGCCAACTGCAGAATATGGTTTGTTCTAGTCTCCTTCGAAGGGACCAAACGGAGCAAAAAATATCCACCTTCTGAGGAGGTATCTCCACCTCCTAGAACACTTAATACAAGTCAGTTGAGAGAGGGAGGATGCCATCATATATACCTTTTTGTTGATCATTTTCCCAGGTGACACTATGGAGACATAATATGTAACAAACGTTATTGCTCCTGAAAATCAGCTCGTCCTTCCAAAATGAAGACTCCAATTAGCCTATATATTTTGCAACCTGTTCTGCTAGTCTTCTTATCAAATTGTTTCTTCCTGTTTGCCATATTTTGTGTTCCTTATACCCCCAGCAATCCTAGTATAAAATTTTAGAATTTGGGTTAAAATCCAGCTAAAACTGACCATGCTGACCATGATTGGGTCTTAGCAATGAGTTCATCGTTGTTGTGGTGCTCCAAAGAATCTGTGCGCCCCATAAGGTCTATTGGTGATAGAATACCATCGTGATGGACACATGTGTTCAGGTTGCAAAAGTTGATTCAGTATAAATACGAACAACAACAAAGATAACAAAAACTTGTGATTCTGAACAGGAGTTTTTGCTAAATATAATATAGCTTTGTGGATTATACCCCCCCCCCCCCCCCAGCCATCATTATCTATTTTTGTCTAAACAGCTGTGTTTTGCTGGGGCCAGAACAAAAATTTGTACTACATTATTTTCCATTCACCAGAATCATCTTGTTTGAAGAAGAAAATCATGTTGATTGCATACAACAATCGCACATAAAAAAGGTAAAATGAATGAATAAGAAGATGATTTACCTGGAAAGAGAGCACTTTTCTTCGCTATAGAATGATATCATGTTTCTTGGGTTAATGATTTGTAGAAGCATGTTTTCTGTTTTTTAGATAATAAGACATTCAAAGTATTGTTTGCGCAGCTTTAAGAGGCTTACTGAAGATGTTTCACTAATGCCAATTTTTTCCATCAAATTTAATTCTTTCTATCAGATAATGTCTAATGATAAGTACAAGAGCGTGGAACACCGGGTAGTAATGAATTCACATGAAGAAGCCAGAGTTTCAAGTGCCATCTTCTACAATCCTGGCAAGAGAGGGGACTCAGTTTTTTATGGACCATTGCCAGAGCTGGTTTCTTCGGAAAACCCGCCAAAGTACAGGAATTTTACTATGCCTGAGTTTTTGGGGACCTTCTTTAAACGAGAGCTTGCGAGCAATGCTCTTATCGAGCACTTCAAAATATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021517