BGIOSGA021523

From RiceWiki
Revision as of 13:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021523| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021523, complete gene.| tag = OsI_223...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021523

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021523, complete gene.

LocusTag

OsI_22399

Ensembl Transcript ID

BGIOSGA021523-TA

Ensembl Protein ID

BGIOSGA021523-PA

Length

2168

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8971341..8973508

Sequence Coding Region

8972453..8973508,8971341..8972345

Genome Context

<gbrowseImage1> name=IndicaChromosome06:8971341..8973508 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:8971341..8973508 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCATCCCAAGCCTAACTCCATCGTCTCCTTCCTTGTGTTACTACTCTTCCACGTCCTTATCCTTAGCCATGAGTCGTCGGCGGCGGCGGCGGCGGCCGGTGGTGATAGCGACCATTTCAGGTACGACGGCTTCGCCGGCGCGCCGCTCGACCTCGATGGCATGGCCATGGTCGAGCCGGACGGCAAGCTCATGCTGACCAACGTCACGTCCCAGATGAAGGGCCACGCGTTCCACCCGGCGCCGCTCCGCTTCGTCGCGCCGCCGCCGAAGCCGAACGCCACTGCCCCCGCCGCCGCCCGGTCCTTCTCGACCACCTTCGTGTTCGCCATCGCCGCCGAGTACGTCACGGTGAGCGGCAACGGGCTCGCCTTCTTCGTCGCGCCGAGCAAGAACCTGTCCGCGGCGCTGCCGAGCCAGTTCCTGGGCCTCTTCAACAGCGAGAACAACGGCAACGCGAGCAACCGCGTGTTCGCCGTCGAGCTCGACACCATCCGCAACCAGGAGTTCGGGGACATCAACGGCAACCACGTCGGCGTCGACGTGAACGGGCTGGCGTCCGTCGCCTCCATGCCCGCCGGCTACTACGCCGACGACACCGGCGAGTTCGAGAACCTGACGCTCTTCAGCGGCGCCGCCATGCAGGTCTGGGTGGACTACGACGGCGCCGCCGCGGCGATCGACGTGACGCTGGCCCCCGTCGAGGTGCCCAGGCCGAGGAGGCCCCTCCTCTCCGTCGCCGTCGACCTCTCGCCGGTTGTGGCGGCGGCGGACGCGGCGGCGTACGTCGGCCTCTCGTCGTCGACGGGGCCGCACAAGACGCGCCACTACGTGCTCGGCTGGAGCTTCGCCATGGACGGACCGGCGCCGCCGCTAGACTACGCGAAGCTCCCCAAGCTTCCGCGCGCCAGCACCAAGCGGCGGTCCATGGTGCTCAAGGTCCTCGTGCCGGTGGCCGCGCCGCTCCTTGCGCTCGCGGTGGTCGTCGCCGTCGCCTCCGTCCTCCTATGGCGGCGGCGGCGGCGGCGGCACGCCGAGGTCCGGGAGGACTGGGAGGGCGTCCTCCCGGCGTCCGGGACGGAGGTCGCCGTGAAGGTCGTGTCGCTGTCGCACGACGCGGAGCAGGGGATGAGGCAGTTCGTCGCCGAGGTCGCCAGCGTCGGCCGCCTCCGCCACCGCAACGTCGTGCCGCTGCTCGGCTACTGCCGCCGGAGAGGCGAGCTCCTGCTCGTCTACGACTACATGCCGAACGGCAGCCTGGACCGGTGGCTGCACGGCCAGAGCGCGCCGCCGCTGGGCTGGGCGCAGCGCGTTCGCGCCATCAGGGGCGTCGCCGCCGGCCTGCTCTACCTCCACGAGGGCTGGGAGCAGGTGGTCGTCCACCGCGACGTCAAGGCGAGCAACGTGCTCCTCGACGGCGAGATGGACGCGCGGCTCGGCGACTTCGGGCTGGCGCGGCTGTACGGCCGCGGCGCCGCCGACCCGCGCACGACGCGGGTGGTGGGCACCCTGGGTTACCTCGCGCCGGAGCTCGCGCACACGCGGCGGGTGACGCCGGCGACCGACGTGTTCGCGTTCGGGTCGTTCGTCCTGGAGGTGGCGTGCGGGCGGCGGCCCATCGAGCACGGCGGCGCCACCGGCGACGACGGCGACGACGGCGAGTTCGTGCTTGCCGACTGGGTGCTCGACCGGTGGCACAAGGGGGACATCGCCGGCGCGGCGGACGCGCGGCTCCGCGGAGACTACGACCACGAGGAGGCGGCGCTGGTGCTCAAGCTAGGCCTCCTCTGCACCCACCCGGCGCCCGCCGCGAGGCCGCCGATGCGGCTGGTGGTGCAGGTCCTCGATGGCGACGCGCCGCTGCCGGAGCTAGCGCCCACGTACCGGAGCTTCATCACGCTGGCCATAGTGCAGAACGCCGACGGCGACGACTCCGGCGCCGCTTCGTGCCCGTCGTCGTCGACGGTGACGACGACGAGCGTCGACGACGGCGCATTCTCCGTCCATTCCGGAGATCGCATGCAAAAAATCGAAACATGTTCGCTCATAGAAACATTGTAA</cdnaseq>

Protein Sequence

<aaseq>MHPKPNSIVSFLVLLLFHVLILSHESSAAAAAAGGDSDHFRYDGFAGAPLDLDGMAMVEPDGKLMLTNVTSQMKGHAFHPAPLRFVAPPPKPNATAPAAARSFSTTFVFAIAAEYVTVSGNGLAFFVAPSKNLSAALPSQFLGLFNSENNGNASNRVFAVELDTIRNQEFGDINGNHVGVDVNGLASVASMPAGYYADDTGEFENLTLFSGAAMQVWVDYDGAAAAIDVTLAPVEVPRPRRPLLSVAVDLSPVVAAADAAAYVGLSSSTGPHKTRHYVLGWSFAMDGPAPPLDYAKLPKLPRASTKRRSMVLKVLVPVAAPLLALAVVVAVASVLLWRRRRRRHAEVREDWEGVLPASGTEVAVKVVSLSHDAEQGMRQFVAEVASVGRLRHRNVVPLLGYCRRRGELLLVYDYMPNGSLDRWLHGQSAPPLGWAQRVRAIRGVAAGLLYLHEGWEQVVVHRDVKASNVLLDGEMDARLGDFGLARLYGRGAADPRTTRVVGTLGYLAPELAHTRRVTPATDVFAFGSFVLEVACGRRPIEHGGATGDDGDDGEFVLADWVLDRWHKGDIAGAADARLRGDYDHEEAALVLKLGLLCTHPAPAARPPMRLVVQVLDGDAPLPELAPTYRSFITLAIVQNADGDDSGAASCPSSSTVTTTSVDDGAFSVHSGDRMQKIETCSLIETL</aaseq>

Gene Sequence

<dnaseqindica>1..1056#1164..2168#ATGCATCCCAAGCCTAACTCCATCGTCTCCTTCCTTGTGTTACTACTCTTCCACGTCCTTATCCTTAGCCATGAGTCGTCGGCGGCGGCGGCGGCGGCCGGTGGTGATAGCGACCATTTCAGGTACGACGGCTTCGCCGGCGCGCCGCTCGACCTCGATGGCATGGCCATGGTCGAGCCGGACGGCAAGCTCATGCTGACCAACGTCACGTCCCAGATGAAGGGCCACGCGTTCCACCCGGCGCCGCTCCGCTTCGTCGCGCCGCCGCCGAAGCCGAACGCCACTGCCCCCGCCGCCGCCCGGTCCTTCTCGACCACCTTCGTGTTCGCCATCGCCGCCGAGTACGTCACGGTGAGCGGCAACGGGCTCGCCTTCTTCGTCGCGCCGAGCAAGAACCTGTCCGCGGCGCTGCCGAGCCAGTTCCTGGGCCTCTTCAACAGCGAGAACAACGGCAACGCGAGCAACCGCGTGTTCGCCGTCGAGCTCGACACCATCCGCAACCAGGAGTTCGGGGACATCAACGGCAACCACGTCGGCGTCGACGTGAACGGGCTGGCGTCCGTCGCCTCCATGCCCGCCGGCTACTACGCCGACGACACCGGCGAGTTCGAGAACCTGACGCTCTTCAGCGGCGCCGCCATGCAGGTCTGGGTGGACTACGACGGCGCCGCCGCGGCGATCGACGTGACGCTGGCCCCCGTCGAGGTGCCCAGGCCGAGGAGGCCCCTCCTCTCCGTCGCCGTCGACCTCTCGCCGGTTGTGGCGGCGGCGGACGCGGCGGCGTACGTCGGCCTCTCGTCGTCGACGGGGCCGCACAAGACGCGCCACTACGTGCTCGGCTGGAGCTTCGCCATGGACGGACCGGCGCCGCCGCTAGACTACGCGAAGCTCCCCAAGCTTCCGCGCGCCAGCACCAAGCGGCGGTCCATGGTGCTCAAGGTCCTCGTGCCGGTGGCCGCGCCGCTCCTTGCGCTCGCGGTGGTCGTCGCCGTCGCCTCCGTCCTCCTATGGCGGCGGCGGCGGCGGCGGCACGCCGAGGTCCGGGAGGACTGGGAGGTGGAGTTCGGCCCGCACCGGTTTGCGTACAAGGACCTTGTCCGCGCCACCCGCAGCTTCGACGGCAAGCGGCTGCTCGGCGTCGGCGGCTTTGGCCGCGTGTACAGGGCGTCCTCCCGGCGTCCGGGACGGAGGTCGCCGTGAAGGTCGTGTCGCTGTCGCACGACGCGGAGCAGGGGATGAGGCAGTTCGTCGCCGAGGTCGCCAGCGTCGGCCGCCTCCGCCACCGCAACGTCGTGCCGCTGCTCGGCTACTGCCGCCGGAGAGGCGAGCTCCTGCTCGTCTACGACTACATGCCGAACGGCAGCCTGGACCGGTGGCTGCACGGCCAGAGCGCGCCGCCGCTGGGCTGGGCGCAGCGCGTTCGCGCCATCAGGGGCGTCGCCGCCGGCCTGCTCTACCTCCACGAGGGCTGGGAGCAGGTGGTCGTCCACCGCGACGTCAAGGCGAGCAACGTGCTCCTCGACGGCGAGATGGACGCGCGGCTCGGCGACTTCGGGCTGGCGCGGCTGTACGGCCGCGGCGCCGCCGACCCGCGCACGACGCGGGTGGTGGGCACCCTGGGTTACCTCGCGCCGGAGCTCGCGCACACGCGGCGGGTGACGCCGGCGACCGACGTGTTCGCGTTCGGGTCGTTCGTCCTGGAGGTGGCGTGCGGGCGGCGGCCCATCGAGCACGGCGGCGCCACCGGCGACGACGGCGACGACGGCGAGTTCGTGCTTGCCGACTGGGTGCTCGACCGGTGGCACAAGGGGGACATCGCCGGCGCGGCGGACGCGCGGCTCCGCGGAGACTACGACCACGAGGAGGCGGCGCTGGTGCTCAAGCTAGGCCTCCTCTGCACCCACCCGGCGCCCGCCGCGAGGCCGCCGATGCGGCTGGTGGTGCAGGTCCTCGATGGCGACGCGCCGCTGCCGGAGCTAGCGCCCACGTACCGGAGCTTCATCACGCTGGCCATAGTGCAGAACGCCGACGGCGACGACTCCGGCGCCGCTTCGTGCCCGTCGTCGTCGACGGTGACGACGACGAGCGTCGACGACGGCGCATTCTCCGTCCATTCCGGAGATCGCATGCAAAAAATCGAAACATGTTCGCTCATAGAAACATTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021523