BGIOSGA021542

From RiceWiki
Revision as of 13:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021542| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021542, complete gene.| tag = OJ1136_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021542

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021542, complete gene.

LocusTag

OJ1136_C11.21

Ensembl Transcript ID

BGIOSGA021542-TA

Ensembl Protein ID

BGIOSGA021542-PA

Length

4968

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8667514..8672481

Sequence Coding Region

8672283..8672481,8672015..8672170),complement(8671527..8671648,8671166..8671219),complement(8670929..8671035
,8670465..8670570),complement(8670183..8670246,8669700..8669788),complement(8668994..8669125
,8668747..8668917),complement(8668535..8668650,8668352..8668463),complement(8668105..8668189
,8667840..8667884),complement(8667682..8667750,8667514..8667590

Genome Context

<gbrowseImage1> name=IndicaChromosome06:8667514..8672481 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:8667514..8672481 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGTGGCGGCGAACGGCGGCGGCGACGGCGCGCAGGCGTCCAACGCGCCCGCCCCCACCAGGCTCGCGTCGGTCTACAGCGAGGTGCAGACCAGCCGCCTCAAGCACGCGCTCCCCCTCCCCTCCGTCCTCCGCTCCCCCTTCGCCCTCGCCGACGGCCCCGCCAGCTCCGCCGCCGGCAACCCCGGTGAGATCGCGAAGCTGTTCCCCAACCTGTTCGGCCAGCCGTCCGTGTCGCTGGTGCCGTCGCCGGAGCCGGCGTCCACCAGGCCGCTCAAGGTCGGCGTCGTGCTCTCCGGCGGTCAGGCGCCCGGCGGCCACAATGTCATCTGCGGCATCTTCGATTACCTGCAGGAATATGCAAAAGGATCCGTCATGTATGGATTCAAGGGAGGTCCAGCTGGAGTCATGAAGTGCAAGTACGTTGAGCTCACTGCGGATTATGTGTACCCCTACAGAAACCAGGGTGGATTTGATATGATCTGCAGTGGTAGGGACAAGATTGAAACACCAGAGCAGTTCAAGCAAGCTGAAGACACTGTAAACAAACTTGATTTGGATGGGCTTGTTGTCATTGGTGGTGATGATTCAAACACAAACGCATGCCTTCTTGCTGAGTACTTCAGGGGGAAGAACATGAAAACTCGTGTCATTGGTTGCCCAAAGACTATTGATGGAGATCTGAAATGCAAGGAGGTTCCAACAAGCTTTGGGTTTGACACTGCTTGCAAGATATACTCTGAAATGATTGGTAATGTTATGACTGATGCACGCTCAACCGGGAAGTACTACCACTTTGTGAGGCTTATGGGACGTGCTGCTTCTCACATTACATTGGAGTGTGCTCTGCAAACACATCCTAATGTTGCACTCATTGGAGAAGAGGTTGCTGCAAAGAAGGAAACTCTTAAAAGTGTCACCGACTACATTACCGACATTGTCTGCAAGCGTGCAGAACTTGGTTACAACTATGGTGTGATCCTTATCCCAGAGGGTCTGATTGATTTCATCCCAGAGGTTCAAAAACTCATTGCAGAATTGAATGAAATTTTGGCGCATGATGTTGTTGATGAGGCAGGGGCTTGGAAAAGCAAGCTTCAACCAGAATCCAGGCAACTGTTTGACTTCCTGCCCAAAACCATCCAGGAGCAACTTTTGCTTGAAAGAGATCCTCATGGAAATGTTCAGGTTGCAAAAATTGAAACAGAGAAAATGCTTATTGCCATGGTTGAGACTGAATTGGAGAAGAGAAAAGCTGAGGGGAAGTACCCCGCACATTTCAGAGGCCAATCTCACTTCTTTGGATATGAAGGAAGATGTGGCCTTCCTACTATTTTTGATTCTAACTATTGCTATGCGTTAGGCTACGGTTCTGGGGCACTTCTCCAATGTGGGAAGACAGGACTGATTACGTCGGTTGGCAACCTCGCTGCTCCTGTGGAAGAATGGACCGTTGGTGGAACTGCATTGACATCGTTGATGGATGTTGAGAGGAGGCACGGAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAACCATTACATCAGCCCTGGTCCCATCCAGTTCAGTGGCCCTGGAAGCAACGATGCGAACCACACCTTGATGTTGGAACTCGGCGCCGAGGCATAG</cdnaseq>

Protein Sequence

<aaseq>MAAAAVAANGGGDGAQASNAPAPTRLASVYSEVQTSRLKHALPLPSVLRSPFALADGPASSAAGNPGEIAKLFPNLFGQPSVSLVPSPEPASTRPLKVGVVLSGGQAPGGHNVICGIFDYLQEYAKGSVMYGFKGGPAGVMKCKYVELTADYVYPYRNQGGFDMICSGRDKIETPEQFKQAEDTVNKLDLDGLVVIGGDDSNTNACLLAEYFRGKNMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIYSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNVALIGEEVAAKKETLKSVTDYITDIVCKRAELGYNYGVILIPEGLIDFIPEVQKLIAELNEILAHDVVDEAGAWKSKLQPESRQLFDFLPKTIQEQLLLERDPHGNVQVAKIETEKMLIAMVETELEKRKAEGKYPAHFRGQSHFFGYEGRCGLPTIFDSNYCYALGYGSGALLQCGKTGLITSVGNLAAPVEEWTVGGTALTSLMDVERRHGKYKPVIKKAMVELDGAPFKKFASLRDEWSLKNHYISPGPIQFSGPGSNDANHTLMLELGAEA</aaseq>

Gene Sequence

<dnaseqindica>1..199#312..467#834..955#1263..1316#1447..1553#1912..2017#2236..2299#2694..2782#3357..3488#3565..3735#3832..3947#4019..4130#4293..4377#4598..4642#4732..4800#4892..4968#ATGGCGGCGGCGGCGGTGGCGGCGAACGGCGGCGGCGACGGCGCGCAGGCGTCCAACGCGCCCGCCCCCACCAGGCTCGCGTCGGTCTACAGCGAGGTGCAGACCAGCCGCCTCAAGCACGCGCTCCCCCTCCCCTCCGTCCTCCGCTCCCCCTTCGCCCTCGCCGACGGCCCCGCCAGCTCCGCCGCCGGCAACCCCGGTCAGTCCCGAGCCCGACTCTTCTGTGGATCTCGCCCTCCTCCTGCTTGGTTGGTGTTCGTTACTGGTGTGAGCTTTAGATTTGATCTGGTTGTGGTGGTGGTGGTGTGCAGGTGAGATCGCGAAGCTGTTCCCCAACCTGTTCGGCCAGCCGTCCGTGTCGCTGGTGCCGTCGCCGGAGCCGGCGTCCACCAGGCCGCTCAAGGTCGGCGTCGTGCTCTCCGGCGGTCAGGCGCCCGGCGGCCACAATGTCATCTGCGGCATCTTCGGTGAGTGCGCTAGTGTTCTCGAGCTGTTTGTTAACCCTGTTTACCCAAGGCTATGGAGGATCAGTTCTCTGTACAAGCGAATTTGAAGCTCGTGGTTTCGAGATGGGGGTGTTCGCGATCTGGATAGGATCGTGGTTTTAGCTAGTTAGAGTTGGTGTTCTCCAAACAAGCTTTGGCATCGAACGCGCACAGTTCTTAGATCTTGATCGATTTTGGTTGTTTAGCGAGGGCCAGAATTAAGAGATCTGCTTATTTTTTGATTGTGAGTTGTGTCCCGGTTGCACTGAAAAATCGAATAGGCACTAATGATATATTGTGGTTCCAAATATATTTCTTGATGAATTTGCTTGCCTTGTGTCGGACCAGATTACCTGCAGGAATATGCAAAAGGATCCGTCATGTATGGATTCAAGGGAGGTCCAGCTGGAGTCATGAAGTGCAAGTACGTTGAGCTCACTGCGGATTATGTGTACCCCTACAGAAACCAGGTATAGCAACTTAGATTCACTAAGCATGCTATTGGGTCGAAAATTCGACAGGTGCCTATTCTCTGATTTTCTGTAAATCATGTTAGTTTAGTAGGTGGTGTTAGGTAAGGTTCTGGTGTAGAAAATATGATAAGACCCTTTTTTTGGTGCAAATAATTACATTCTCATTTTCTTTTTTGGAGTATGATCATGCTAGGTGTCAAGTACTGCTGATGGTTAGGTCGCTGCATGAAATATACACACTTTTCCTTTTTAAGGGGCTCTCTTATTTCAGGTACGATTTTAATTTTGTTTCTCTTTTTGATAGGGTGGATTTGATATGATCTGCAGTGGTAGGGACAAGATTGAAACACCAGAGCAGGTATATCTTTGCGCTTTTATGTGCAAATGCTTATTTAATCCCTTTATCTGCCTTTCAGGGTATTTGGCTATTTTGTTGCCTAGTTTCACTAGCATTTTCTTATTTTAAATTCTGTCATGTATTTGAGCAGTTCAAGCAAGCTGAAGACACTGTAAACAAACTTGATTTGGATGGGCTTGTTGTCATTGGTGGTGATGATTCAAACACAAACGCATGCCTTCTTGCTGAGTACTTCAGGTTGGCCCCTAATATGTGTAACCCTGTTCTTTTGCTTCTTAGGCAATTTTCTTTAGTTGCTGTTGACAAAGACCTTTGTGTACTGTTGATGCTCTGTCAACTGTAAACAGGTCAATTCCGAAAGGAAATACAGAAAAAAGTTTTCCAAACAGTAACAAAAAGCTCTTATTTTTGTTGTATGTTGCTGAAGCATATTTTCTGCATGATGTTTTCTGTTAAACAAGCATTAAGTCTGCAATAGCATTGAGCCATTAACTGAATTCTGCAACATAGAGAATCTAGATATTATTCTCGATAGTTTTATTGGCAATATTAACTATATGCTTGTTGACAAGTGAGTGATTGTTTAACTTTGTAGGGGGAAGAACATGAAAACTCGTGTCATTGGTTGCCCAAAGACTATTGATGGAGATCTGAAATGCAAGGAGGTTCCAACAAGCTTTGGGTTTGACACTGCTTGCAAGGTATCAGGTTCTTGATCCTTGTGCATCAGTTTTCAAAATTTCAGCTAATTCTACTGTAGATTGTGAAGTTTTCACCCTTATGACCTTGATGCACTTGCTCAACTGCACATGGTGAAATTAGGACATTTTGCACATAATATGAAAATCATCACGGCAATAATAACAAGTTGACGATTTTTCCTCAAAAAAGTTAACGATTGATCCATCTTCTTTTTCAGATATACTCTGAAATGATTGGTAATGTTATGACTGATGCACGCTCAACCGGGAAGTACTACCACTGTAAGTTTCTGTTTTGGTTGTCAGACATATGCCAAACTATGATTTTTGTTTTCCTAAACATGGAAAGAGAGTTGATAGGAGCAAACTATGTTTAGTTTGAAGAGATCATGGATAATAATTGCCAACAGTAGCTGTACATGGCTATTAAAGTATACTGTCATTTAGTTTATCCATAACTAAATTGAAGAAGGTCATTACATGCTCAGCAACCTAGTAAAGTAGTATTTATTTTTTCGTACATTATACAACAAGGCCTCAAACATCCTCATAATGCTGTAACAACATGCTGCTAACATATAAAATCCTTGAGTGTCAACTTCTGCAGATGGTTAATTTAACATTATTTTGTCTATTTCTGACACAATACTAATAAGTATTTGTTATGTTCATGTAGTTGTGAGGCTTATGGGACGTGCTGCTTCTCACATTACATTGGAGTGTGCTCTGCAAACACATCCTAATGTTGCACTCATTGGAGAAGAGGTTTGTAATTCTTATATATGATCTTCTACATTGACCTGACACTCCAACCTTTTCCTAGCTTGAATACTGTTCCATAATGGTGGAATCATCTATTCATTTCGATTCATGTTTATTTCATGCTGATTTCATTTACACTTTTTCCTACCAAATGTGATGGGCATGATTGGGGCTAGTCCACTAGGCCTTATTGAGGTTCGTTGTCCCTGGACCCAGTTGGTGTTGCATTTCCATGGAAGTCAGCATCACAATCACAAGGGCAAGCGGTAGATAGACAATGGACACTTGTTTTTCTGTCAATGCTAACAACTACAATAGGTCTCCTTTAAAGCGGATTATTGTAACAATTGTATATACGTTAATACTACTGCAGTATGTTGCTGTACAGTAACATTGCAGGTCCCAATTCGGTGTTGGCACATAGCACAAACCTCGTACTTTATATCACAGTTTGGTACTAAAAATTGACTCGAGTAAAATGTTGCTGGAGATGATCTGCAGTTTTTCTAAAGTGCACATGGCATATTGTTTGCTTATTATCATTACCATTTCAGAACACTTCTTTTTTGTACTGTAGGTTGCTGCAAAGAAGGAAACTCTTAAAAGTGTCACCGACTACATTACCGACATTGTCTGCAAGCGTGCAGAACTTGGTTACAACTATGGTGTGATCCTTATCCCAGAGGGTCTGATTGATTTCATCCCAGAGGTTTGACAATCTTCATTCACCTGTGATTTGTGTTGTCACGATTTGCATTACTGATTTCATTCTGTTTCTTTCCTAGGTTCAAAAACTCATTGCAGAATTGAATGAAATTTTGGCGCATGATGTTGTTGATGAGGCAGGGGCTTGGAAAAGCAAGCTTCAACCAGAATCCAGGCAACTGTTTGACTTCCTGCCCAAAACCATCCAGGAGCAACTTTTGCTTGAAAGAGATCCTCATGGAAATGTTCAGGTAAACAGTTATAGTCCTCCCTTCGCTGACATGACTTTTTGCTGAAGAGTTGGTCATACTAAGTCCCTAACTGGTGTTGGAAATTTTTGTTTTTAGGTTGCAAAAATTGAAACAGAGAAAATGCTTATTGCCATGGTTGAGACTGAATTGGAGAAGAGAAAAGCTGAGGGGAAGTACCCCGCACATTTCAGAGGCCAATCTCACTTCTTTGGGTATGTATGAATTGTTGCATTTTCCAAAAAAATAATTCCATCTCTAATGCTGTTGCTGTGTAATTTTGCAGATATGAAGGAAGATGTGGCCTTCCTACTATTTTTGATTCTAACTATTGCTATGCGTTAGGCTACGGTTCTGGGGCACTTCTCCAATGTGGGAAGACAGGACTGATTACGTCGGTATGCACACTATAGTTCCCTGTCACTTGTTGGATACCCAGATTGGAACCTAAGAACGGGCTTTGTGGAAGTGATGTTTGCAGCATGTTTGTTTACGAACCAGCGCAGGCAGATGAACTTCTAATGATATGATCATGCTCTTATGTTTGTATTTTTACTCAGGTTGGCAACCTCGCTGCTCCTGTGGAAGAATGGACCGTTGGTGGAACTGCATTGACATCGTTGATGGATGTTGAGAGGAGGCACGGTAGGTTTCTACAGTTCCGTTGTTTGCACTTGGAGATTAGCTAGCTATGTTTCATTAAATTTCTTTTGACCGTTTATTCAAATACCTACTATGTGATTAAATCTTCAAGTTACTTTTGGAACTAATTTGGGTCAGATTTTCATATAATATGCATTGCATTACCTGTCATTTCCTTGTTTAAATCATAAAACTAATGTTTTTTTTTGTTTTCTGCAATCAGGAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGGTACGAAGCACTTCTATTATCAACGCTAACAGTAATGTGATTTATGGACCTTTACCCAAAATCTCATTTCATCTATCATCCATTTTCAGGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAACCATTACATCAGCCCTGGTACGTGGACATGCAATAGCTAGCAAGTAGTGCAAAATGACTATAACAGCAACATAGAGAACAATGACATGTTTAATTTCTTGCGAAACAGGTCCCATCCAGTTCAGTGGCCCTGGAAGCAACGATGCGAACCACACCTTGATGTTGGAACTCGGCGCCGAGGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021542

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021542&oldid=44067"