BGIOSGA021557

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Revision as of 13:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021557| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021557, complete gene.| tag = OsI_223...")
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Gene Name

BGIOSGA021557

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021557, complete gene.

LocusTag

OsI_22341

Ensembl Transcript ID

BGIOSGA021557-TA

Ensembl Protein ID

BGIOSGA021557-PA

Length

3415

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8454259..8457673

Sequence Coding Region

8457536..8457673,8455839..8456255),complement(8455154..8455420,8454259..8454633

Genome Context

<gbrowseImage1> name=IndicaChromosome06:8454259..8457673 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:8454259..8457673 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTGCCGCTTCCGCCAAAGGAAGATGCAACGGGGATGTGGCCGGCTAGCGGCGAGCGGCCGCGGCGGCGGCGGGTGGCGATTCGGTCCCGATGACTCTGAGGATGTGGACGAGAATAGGAGGTGTCGTACACACGAGAAGACTTTGGTTGCTACTAAGCCTATGATTCAGAAGGCCATTCAAGAACTATACTCTGCAGTTCTTCCTAGGACGATGCTTGTCGCTGACATGGGCTGTTCTTCGGGACCAAATACACTAAACTTTATCTTCGAGGTGATAAAAGTGACCAGCGAATATTGTCAAAGGATAGGTCACCGCCCTGTTGACCTTCAGTTCTTTATGAATGATCTACCTGGCAATGACTTTAACTACCTATTTAAATCTTTAGAACAACTAGATAACTTGGTCGCCAAAGATCAAAACAGAGAAGCAGCAATACTGCCTAAGTACTATGTTGTAGGCTTGCCAAGATCCTACTATAGTACAAGAGTTTTCCCTGACAAGAGTGTTCACCTCTTCCATTCATCTTATTCCCTACATTGGAGATCTCAAATGTTTCAGGAGAGCAACAATGGAGAATTCCTAAATGAAGGGAACATTTACATCGCCAAGACTACCCCTAAATCGGTGATAAAGCTATACCAAGAGCTATTTTACGATGATTTCTCAAAGTTTCTTGAGTTGCGCTACCAGGAACTTGTGTCTGGTGGTCAGATGGTGCTTAGTTTTCTTGCAAGGAAGAAAGATGACCTATATGATGGAAACCTAAGTGTTCTTTACGGATTAATCTCACAAGCATTGCAATCTCTAGTTATGGAGGGTCTCGTGGAGAAGGAAAAGCTTGACTCCTTCAACATTCCAAATTACGAGCCATCTATCCATGAAGTCAAAACAGTGGTGATAAGCAGCAAGCTTTTCACCATCAACAAAATTCACGTCTTTGAGTCGAACTGGGATCCTGATGACGACTCATCAGATCAAGGACAAGCAACTAATATTAATCCTATCAAGAGTGGCTTGAACGTCGCCAAGTGCATTAGAGCTGTGCTTGAGCCGTTGATCGCTAGCCATTTTGGAGAATCTATACTAGACGTGCTCTTCTCTAGGTTCGCACGTAATGTCACCAAGCACCTTGAGAAAAGGAAGGGAAAGCACAGCGTCATTGTGCTGTCGCTCAGCAAAAGAAAGAATTAA</cdnaseq>

Protein Sequence

<aaseq>MECRFRQRKMQRGCGRLAASGRGGGGWRFGPDDSEDVDENRRCRTHEKTLVATKPMIQKAIQELYSAVLPRTMLVADMGCSSGPNTLNFIFEVIKVTSEYCQRIGHRPVDLQFFMNDLPGNDFNYLFKSLEQLDNLVAKDQNREAAILPKYYVVGLPRSYYSTRVFPDKSVHLFHSSYSLHWRSQMFQESNNGEFLNEGNIYIAKTTPKSVIKLYQELFYDDFSKFLELRYQELVSGGQMVLSFLARKKDDLYDGNLSVLYGLISQALQSLVMEGLVEKEKLDSFNIPNYEPSIHEVKTVVISSKLFTINKIHVFESNWDPDDDSSDQGQATNINPIKSGLNVAKCIRAVLEPLIASHFGESILDVLFSRFARNVTKHLEKRKGKHSVIVLSLSKRKN</aaseq>

Gene Sequence

<dnaseqindica>1..138#1419..1835#2254..2520#3041..3415#ATGGAGTGCCGCTTCCGCCAAAGGAAGATGCAACGGGGATGTGGCCGGCTAGCGGCGAGCGGCCGCGGCGGCGGCGGGTGGCGATTCGGTCCCGATGACTCTGAGGATGTGGACGAGAATAGGAGGTGTCGTACACACGTATTGGTCCCCCCCACAACAATCCACATACGAATCTTCAGGTGGGCCAGCGCTGTATTTCGAGCGTGCGCTCAAAATAAAGAAAATACGATCCTAAATTCCTAACATCTCCGTATACTATTTGACGCACGAATCTTTAAACCATCGTGTGGTTTCTAGCCTAGGTGCTAAAAAGACTTTCCGAACTATCTCCTCCTTCCGCACGGCCGCAAGTCTCCAGTAGATCGTCGCCATCGGCTTCTCACAGGCACAGCTCGCCTCGTCGCGGAGCTGCAGGGAGACACCTGCCACGCCACCAATGGTTGCCGCACGCATGGGGTGGCGACCCGCCGCCGCCGCCCGAGCCGTTCTTCTTCGCGAAGCTCGCCACCTGCGCCCAGGCCCAGCACACTACGTACGACGTGGCTCGCGCGCCGGAGTGAAGCTGTAGCTAGCCATCACTAGACTAGAAGGCACGACGACATGTACTCTACCCAACGGCACGAACAGCTAGCACCAGCATGACGTACGCGCTCCTTGTAGACGCCGAGAAGTTGGTGCTGCCGCACGCCAGCACACTCACCATGCCGATCGAACGTCGACTAATCAAAATTGACCAAGAAACCATCCACAAATTCAACAAATAAGTGGTAGAAATTGAAGCAGTTCTTGCGTGCGATCGAGAGGGGCGTTCGATCGACCATTACATACGAGAAGCTAGGGAAGCGCCGGCAGGGGGAGCTAGCTTGCCGCATCCACACCACGTTCCCGCGCGCAGTACGCCGCTGGCCACCAGCTGCCCGCGCCTGCTCTCGCCCTTCTTGCCGGAACCAAGAAGCAGCCACCAGCGGCACGAACAGAGCTTCTCCATGGCCATGGGATTGGGGGAAGGGGACAGAAATTGTGACGGCAGTGACGTACGGTAGTGGTATGTTTTCAAATTTAGAAAATTTTGATGGCACGTAGTAGGTTTTCGTTAGTACCGATGGTATTTTTTCTAGAAAATATATAAGAAAAAGGAAAAGGTGTAACTAAATTTATAGAAAAAAATAGTAACATCTACGACACCAAAATAGTTTTATTAAATTTAATATTGAATATATTTTGATGCAATTTTTGTTTCGTATTGAAAATGTTACTATATTTTGCTACAAACTTGATCAAACATAAAGAAGTTTGACTAAGAAAAAAAATCAAACAACTTATAATATGAAACAGATGGAGTAGTTTGTTTACTAGTATGCAACTGTTAATTCCAAACAATTTAACTTGATTTAATATAATGTGCACATGAATTTTAGGAGAAGACTTTGGTTGCTACTAAGCCTATGATTCAGAAGGCCATTCAAGAACTATACTCTGCAGTTCTTCCTAGGACGATGCTTGTCGCTGACATGGGCTGTTCTTCGGGACCAAATACACTAAACTTTATCTTCGAGGTGATAAAAGTGACCAGCGAATATTGTCAAAGGATAGGTCACCGCCCTGTTGACCTTCAGTTCTTTATGAATGATCTACCTGGCAATGACTTTAACTACCTATTTAAATCTTTAGAACAACTAGATAACTTGGTCGCCAAAGATCAAAACAGAGAAGCAGCAATACTGCCTAAGTACTATGTTGTAGGCTTGCCAAGATCCTACTATAGTACAAGAGTTTTCCCTGACAAGAGTGTTCACCTCTTCCATTCATCTTATTCCCTACATTGGAGATCTCAAGTAAGTCTGTCTCTGAAAACCTATCCCAGTTGAGTGGTAACTCATTAAATAGGCCATGCATTTTTTTTTACTGATCGAAAGAGTACAAATAAACTGGTTATTAGTTGCTAAAGATTTCTACTGAATTCTAGTATTCTACAACAAATAAAGTAGTTATTTCTATATGTACATTTTGTAAGTTCCCATCGATTATATACTCCCATAATTTGTCGCTTTTTTTGAGAAAATAATTTCTCTATTCACTCAATTCATACCACATACAAAACAGTGATATTATGAAAGTAGTAAAGTGAATGCATTTTTTGCTGCAATGCATGAGATATCCAAAAAGAGAGACCGCATTTTCTGTACCAGCATTATGAGTTCATAGCACCAATAATTAATATGTGTTTATATCTTCCACTGCTTTTGTGCACAGATGTTTCAGGAGAGCAACAATGGAGAATTCCTAAATGAAGGGAACATTTACATCGCCAAGACTACCCCTAAATCGGTGATAAAGCTATACCAAGAGCTATTTTACGATGATTTCTCAAAGTTTCTTGAGTTGCGCTACCAGGAACTTGTGTCTGGTGGTCAGATGGTGCTTAGTTTTCTTGCAAGGAAGAAAGATGACCTATATGATGGAAACCTAAGTGTTCTTTACGGATTAATCTCACAAGCATTGCAATCTCTAGTTATGGAGGTACACTAAACCACTAACCCTACTAATTACGAACTAGCATTATACACTCCCATTTTCCTATAGCTTAACTAATTTCTATATTGGTGGATATATGGAAGCCATGAAATTTAGAGGTCCGTGTATATATGAACATACACACATTTTCCAATTAAAAAAAAAACTTTGGGCTTTCCTCAGGACATATTCTGTAAAAAGAAGATTTTCAAACCAATTTGATTAATTGAAATGACAATTTACTCAGGACAATGCAGATTTGTTTCAATCTAAAATGAGCCACTTAGCACTTACTACTATTTTTTTAAAAAAATGGATTAAAATCCGGTCTCTATATCCAAACATTATTACACCTTATTTTCTACGCTGATACTTCACATTTCCAGTCTTATGTACAGGATGATTGGTTGATAGCAAGAAGAGTGTTATAAAATGAACAATACATATTATTTTCCTCGCCTGATCAGTATATTATAAACAGAGTCTCTAAAATGAAAGAACTTGCTTTCTGCTTTCAACATGGCAGGGTCTCGTGGAGAAGGAAAAGCTTGACTCCTTCAACATTCCAAATTACGAGCCATCTATCCATGAAGTCAAAACAGTGGTGATAAGCAGCAAGCTTTTCACCATCAACAAAATTCACGTCTTTGAGTCGAACTGGGATCCTGATGACGACTCATCAGATCAAGGACAAGCAACTAATATTAATCCTATCAAGAGTGGCTTGAACGTCGCCAAGTGCATTAGAGCTGTGCTTGAGCCGTTGATCGCTAGCCATTTTGGAGAATCTATACTAGACGTGCTCTTCTCTAGGTTCGCACGTAATGTCACCAAGCACCTTGAGAAAAGGAAGGGAAAGCACAGCGTCATTGTGCTGTCGCTCAGCAAAAGAAAGAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021557