Os11g0579900

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Revision as of 09:14, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0579900| Description = Armadillo-like helical domain containing protein| Version = NM_001074683.1 GI:115486014 GeneID:4350783| Length = 434...")
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Gene Name

Os11g0579900

Description

Armadillo-like helical domain containing protein

Version

NM_001074683.1 GI:115486014 GeneID:4350783

Length

4348 bp

Definition

Oryza sativa Japonica Group Os11g0579900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:23735415..23739762

Sequence Coding Region

23735792..23735923,23736055..23736313,23736416..23736579,23736946..23737108,23737190..23738712

Expression

GEO Profiles:Os11g0579900

Genome Context

<gbrowseImage1> name=NC_008404:23735415..23739762 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:23735415..23739762 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggatccacagggtggtcaggattgttccaagtttggggcctttgttgacaagaattccggtgcttcatcgagtagtgctgctgacattgagcttcagaacatgtgtggtacttctgtggcaaggactgcttctttgagcacgggaagggcttcgccttctcaattcgcaccgactgttggaagatatcatcgtgctgccggctcctgccaaagtgatgttctacctgatgagcagtctcttgcatcagcttttgacatggttctgagtttcagaaatcaccctgttgattatcctaccaatccctgcaatgttgtgccaagtaatggactatatgtatcaggccctatgagggctacttcagttcagagctttgatccactgcttgttcaggatgaatccatgcgtccacagtttggcgctggacatggcaagctaaagactgatgagttcactgttgaccaacaagaacaagcacacatgctctcacattactttgggaattggccacagaactatgggatgaataatatgggtggagttgccagtactccatacaagccatcagcttcactctaccagcaaccattttatatggatgagcaatctcaaatgtatgcaccttatcagcagattccttcaaacttcttgttgcagcatgatatggatgtacagaaccactcttctatgcaaccacactatgtttatccacaaatgcaacatgctgctgggtcaaatgttaggagcaatcaacaggctgcagcttgcacttctgcaaggggcagatcaacatatggacatcaactgttgctggatggtgctgtttaccataatggaaataaccagatgaacagtttgtatatggatggttttcctggtatgtatactgacagttcatttgactccagtgattttcaccgtctgctggaagctgaaaagtttgcccatccgtatgaactaaactcttcatccaaaggtttcttgcaacctcaaatcccagatgatctcagcacgatgaagatgctgatgaattctgctggggtaaatcgagtaagagctatcaagttccctcctacagtaaatggctatagtggtgtgggtcgaagaaccaatggttatggccataaccatctggatgttaaaagtgatgaaaccttgcacctcaacgggttgaattcccagtttatgtccttaaaatctgagtatgatttggcgatgaaatcaacacagctgaattatggttcagttgatgaagttgctggaaggatttatatgttagcgaaggatcaaaacggctgccgctttctgcaaaaagtattcactgaaggcaccaaagaggactttgaaaaaatcttagctgaaattattgatcattttggagaacttatgattgatccattcggcaattatttggttcagaagttgcttgaagagtgcagtgatgatcagaggacgcgtataatttgtgaaattaccagagtgcctggagagcttattacagttgcttgcaacatgcatgggactcgcacagttcaaaaggtcatagatacaataaatactccggaacaaatttcgaaggttgtatctgcattgagtcctggagcaatgcgtttgatgacagatactaatggaagtcatgttgcacaacggtgcttgaagaaattgttacctgagtataaagcgttccttcttgatgttgccgcattgcgttttcttagattagcaaaagatcaacatggctgttgtatcattcaaaagtgtattgaacattcaaatgatgagcagaagtacaacttgttgtgcaagatcacatccagtgcccttagcctttcagaggatcagtatggaaactatgtcattcagtttgttgtcaacctaggaattgaatgggccacaagcaaaatagtaaaagaactaaagggtcactttggatatctatcaatgcagaagtgtggtagccatgtcgtcgaaaattgtctgaagcaagcatcggagctcgaccgggaaatgattatccatgaacttatggctgattccaagttaccgcatatcatggcagatccatttgggaattttgtgattcaaacagcacttaaagagtgcaagggtgaactacatagctcctttgtcgaagctattaggccgcatgctcctgcgctgcagaacgatgtgtatgcgaaaagggttttatcgaagacatatctgaagaacaagcaataccgacttggcattttttag</cdnaseq>

Protein Sequence

<aaseq>MEDPQGGQDCSKFGAFVDKNSGASSSSAADIELQNMCGTSVART ASLSTGRASPSQFAPTVGRYHRAAGSCQSDVLPDEQSLASAFDMVLSFRNHPVDYPTN PCNVVPSNGLYVSGPMRATSVQSFDPLLVQDESMRPQFGAGHGKLKTDEFTVDQQEQA HMLSHYFGNWPQNYGMNNMGGVASTPYKPSASLYQQPFYMDEQSQMYAPYQQIPSNFL LQHDMDVQNHSSMQPHYVYPQMQHAAGSNVRSNQQAAACTSARGRSTYGHQLLLDGAV YHNGNNQMNSLYMDGFPGMYTDSSFDSSDFHRLLEAEKFAHPYELNSSSKGFLQPQIP DDLSTMKMLMNSAGVNRVRAIKFPPTVNGYSGVGRRTNGYGHNHLDVKSDETLHLNGL NSQFMSLKSEYDLAMKSTQLNYGSVDEVAGRIYMLAKDQNGCRFLQKVFTEGTKEDFE KILAEIIDHFGELMIDPFGNYLVQKLLEECSDDQRTRIICEITRVPGELITVACNMHG TRTVQKVIDTINTPEQISKVVSALSPGAMRLMTDTNGSHVAQRCLKKLLPEYKAFLLD VAALRFLRLAKDQHGCCIIQKCIEHSNDEQKYNLLCKITSSALSLSEDQYGNYVIQFV VNLGIEWATSKIVKELKGHFGYLSMQKCGSHVVENCLKQASELDREMIIHELMADSKL PHIMADPFGNFVIQTALKECKGELHSSFVEAIRPHAPALQNDVYAKRVLSKTYLKNKQ YRLGIF</aaseq>

Gene Sequence

<dnaseqindica>3840..3971#3450..3708#3184..3347#2655..2817#1051..2573#actctccttctcatccaagccaccacccgtgaaaatcttgggagataaatccatctccaacctccaccacccccgattcttcgcgattagttgtttccttcttcttcgcaggattccctcctgcgaattctgcatcgccatcatccactcctgaaggttgtctctctgaatcttttttttttttactgctgttctttcttttacactgatgatgaagtttgttcatccctctctgggggatcttcgatcgggttggatcgattggagggctgtttcgatcgggtttgttgggtttgtttcgccgaaggattgggtttttgggaggtgggttttgttcggttcttgttcttgggggtggggggatcgtgcctgatcgggggggtttttctgggggttttgcggccttcgatcattggggaggttgaggcgatgcggcgatgggtggattatcggtgcatgattcccctgcattccgcatggattttcctcttgatcttggtggtgtaatctgactgttggactgtgtgataagtagtagtagtagtttacttgcacttttgatccccctcacatttacttgttcttgtcatgattttggtattagtttgcattgtcttgagatgtgtttgtgtggatgaggggatcagaattttggccttctcttttgtttgatttgtttaaacctgtcaccatctggtgatctgcagaatgttggctcgtagtttttaactgtagaatacaattgtgtggatgcttgtcttgatcccgattgttcgtccaaatcatcatcttgtttggtgaagacttgctgtcatgtgtggctaaagccctctgttctgtttcccagtggtttttgtctttgtctctgcttttctgcctgcacattttctactcgaagtatctgaaaagatgatactttatgtctgtttcatataggatcgatgagttctgattttaacatggaattcctggtgttgcaggtccagtgactttacctgcattgtgtgattgaggcctcacttgtcgtcgcacaccgtcttgtttgcggcaatggaggatccacagggtggtcaggattgttccaagtttggggcctttgttgacaagaattccggtgcttcatcgagtagtgctgctgacattgagcttcagaacatgtgtggtacttctgtggcaaggactgcttctttgagcacgggaagggcttcgccttctcaattcgcaccgactgttggaagatatcatcgtgctgccggctcctgccaaagtgatgttctacctgatgagcagtctcttgcatcagcttttgacatggttctgagtttcagaaatcaccctgttgattatcctaccaatccctgcaatgttgtgccaagtaatggactatatgtatcaggccctatgagggctacttcagttcagagctttgatccactgcttgttcaggatgaatccatgcgtccacagtttggcgctggacatggcaagctaaagactgatgagttcactgttgaccaacaagaacaagcacacatgctctcacattactttgggaattggccacagaactatgggatgaataatatgggtggagttgccagtactccatacaagccatcagcttcactctaccagcaaccattttatatggatgagcaatctcaaatgtatgcaccttatcagcagattccttcaaacttcttgttgcagcatgatatggatgtacagaaccactcttctatgcaaccacactatgtttatccacaaatgcaacatgctgctgggtcaaatgttaggagcaatcaacaggctgcagcttgcacttctgcaaggggcagatcaacatatggacatcaactgttgctggatggtgctgtttaccataatggaaataaccagatgaacagtttgtatatggatggttttcctggtatgtatactgacagttcatttgactccagtgattttcaccgtctgctggaagctgaaaagtttgcccatccgtatgaactaaactcttcatccaaaggtttcttgcaacctcaaatcccagatgatctcagcacgatgaagatgctgatgaattctgctggggtaaatcgagtaagagctatcaagttccctcctacagtaaatggctatagtggtgtgggtcgaagaaccaatggttatggccataaccatctggatgttaaaagtgatgaaaccttgcacctcaacgggttgaattcccagtttatgtccttaaaatctgagtatgatttggcgatgaaatcaacacagctgaattatggttcagttgatgaagttgctggaaggatttatatgttagcgaaggatcaaaacggctgccgctttctgcaaaaagtattcactgaaggcaccaaagaggactttgaaaaaatcttagctgaaattattgatcattttggagaacttatgattgatccattcggcaattatttggttcagaagttgcttgaagagtgcagtgatgatcagaggacgcgtataatttgtgaaattaccagagtgcctggagagcttattacagttgcttgcaacatgcatgggtatgaacaatgatctcttcataatttttaatctttaatattcttgccttttgttcttatctattagaaaaaaatattcaggactcgcacagttcaaaaggtcatagatacaataaatactccggaacaaatttcgaaggttgtatctgcattgagtcctggagcaatgcgtttgatgacagatactaatggaagtcatgttgcacaacggtgcttgaagaaattgttacctgagtataaagcggtaaagcatctgccagtcatgtgatttacatagtctttctgtattgtcatacttcttgattcatcttaatatcctgtagggttacagatcataacaacccacgactgtttccacctaaaaaattataatatagacatattgtaaaattttcaatttatctatagtctgtacataactccaactagttcttcactggaaaaccgtcatatgcgcatgttttcattcacagtgcagcaacaatggcactacaggataacaatgaaaataatcttacattacgaatttgattgtttgatatgcatattaatcttcttggcctccattgtttttgcactgacctgtggatgcctgtattacttgttacagttccttcttgatgttgccgcattgcgttttcttagattagcaaaagatcaacatggctgttgtatcattcaaaagtgtattgaacattcaaatgatgagcagaagtacaacttgttgtgcaagatcacatccagtgcccttagcctttcagaggatcagtatgggtatggcattatctttgcattccacttaataggtattttaagtgttctaagtaatattacagtaatgttttttaataacatatgatttctttttttttgcagaaactatgtcattcagtttgttgtcaacctaggaattgaatgggccacaagcaaaatagtaaaagaactaaagggtcactttggatatctatcaatgcagaagtgtggtagccatgtcgtcgaaaattgtctgaagcaagcatcggagctcgaccgggaaatgattatccatgaacttatggctgattccaagttaccgcatatcatggcagatccatttgggaattttgtgattcaaacagcacttaaagagtgcaaggtaaatgtagcgatgcatcctcacccaaatgaattctctcctcaattcttgtataaatgttgtttaaataattgtgcaaaatgaattctctcctcaattcttgtataaatgttgtttaaataattgtgcagggtgaactacatagctcctttgtcgaagctattaggccgcatgctcctgcgctgcagaacgatgtgtatgcgaaaagggttttatcgaagacatatctgaagaacaagcaataccgacttggcattttttagcctgtcatttgggtgattgcaggaaggaaggtgcaagttcaggcagcatgtatcagaacaggacttttagtgtacaatggtgtgataaagaaaaacagttcttagagaaaatgatctttttgtctcaaggtagtcttggcgaaggaaagcttttggttggaccatttcagtatatttacgtttgtagaattaatatagccaaaataactgtcagttgtgttgttggatcggtcattaatcatgtagtacgtcctgtatctgcaaaaactgtagtttatcagtaacatcttgtaatcactagtctgatcagatgagctgtatcatctgcaagggtttatattccggttgtgtccttagtaaaattttagggtttttac</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0579900, RefSeq:Os11g0579900