BGIOSGA021625

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Revision as of 13:04, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021625| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021625, complete gene.| tag = OsI_222...")
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Gene Name

BGIOSGA021625

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021625, complete gene.

LocusTag

OsI_22225

Ensembl Transcript ID

BGIOSGA021625-TA

Ensembl Protein ID

BGIOSGA021625-PA

Length

6308

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:7483370..7489677

Sequence Coding Region

7489599..7489677,7489342..7489474),complement(7489186..7489257,7488621..7488671),complement(7488181..7488252
,7487429..7487780),complement(7486629..7486816,7484742..7484805),complement(7483370..7484389

Genome Context

<gbrowseImage1> name=IndicaChromosome06:7483370..7489677 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:7483370..7489677 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGCGGCGGCGCCTCCTCCTGCTCCTCGCCCTCCTGCTGTGCCGCCTCGCCGCCGTCCTCCCCACCTCCGAAGTGGAGGCCTTGCAGGGTTTCATGGCAGGGTTCGCCGGCAGCAACGCGGCGTTCCAGAGCTGGGACGCGTCCGCGCCCAACCCTTGCACCTGGTTCCATGTCACCTGTGGCCCGGGGAACCAGGTCATCAGGCTGGATCTCGGGAACCAGTCGCTGTCCGGCGAGTTGAAGCCCGACATTTGGCAGCTGCAAGCATTGCAATCCTTGGAACTTTATGGCAATAGCATCAGCGGGAAAATACCTAGCGAGCTTGGGCGGGACTTGTCACATAACAACTTGTCGGGAATAATACCGACCAATGGTTCATTTTCACACTTCACCCCAATCAGAGAAATCGCGTTAGGGTCTGCAAGAGGGATCTCTTACTTGCATGAAGGATGTGATCCCAAAATTATCCATCGAGATGTCAAAGCTGCTAACATTTTGTTGGATGAAAAACTTGAAGCGGTTGTTGGTGATTTCGGTCTGGCTAGAATTATGGATTACAAAGTTTCCCATGTTGTAACCGGTGTGATGGGGACATTGGGGCACATTCCCATGGAGTACCTGACTGCAGGAAGAACTTCAGATAAAACTGATGTTTTTGGGTATGGGATCATGCTTTTTGAACTTATTAGTGGGAAAAGGGGATTTGATCTTGTTGGTCTTGCAAATGAAGAAAATGCCAGAGTGCATGATTGGGAGTCCGCTCCAAGCCGCCCCAGAATGTCAACGGTGGTGACAATGCTAGAAGACGGTATCGCGGAGCACTGGGATGCATGGCAAAGGAAGACGATTGTGCAGGCAAGCCTGCAAGGAGGACAGGGCGTTTCTGAGGCTCGCAATGACTCTGTTGCAAATCTCCCTCCAGACACATTGTCTGGTCCAAGAAAAGATAAAATCTTACAAAAACTGAGGTTTTGGTTTTGGGGTATCTGTAATGCAAAACCTCAGGCTACCAAGGCCTCCAAGTCCATCTCCCACCTCAAGTCCCCGTCCAGGCCCGACGCCGTCGTCGCCTTCCTCGCCGGCCTCGGCCTCTCCGCCGCCGACATCGCCGCCGCCGTCGCCTACGACCCGCGCCTCCTCTGCGCGGAGGTCGACAGGACGCTCGCCCCGCGCCTCGCGGAGCTCGCGGGCCTCGGCCTCTCCCCCTCGCAGATCGCGCGCCTCGTCCTCGTCGACCCCGCCCGCTTCCGCCGCCCCACCGTCATCTCCAAGCTCCAGTACTACGTCCCGCTGTTCGGATCCTTCGAGACCCTCCTCCAGGCGCTCAAGAACAACTCCTACCTCCTCAGCTCCGACCTCGAGAAGGTTGTCAAGCCCAACGTCGCGCTCCTGCGGGAGTGCGGGCTAGGTGCTTGTGATATTGCTAAGCTGTGCATCCCGTTGCCGAGGCTGCTCACCACCAGCCCAGAGCGTGTCCGAGATATGGTGGCTCAAGCAGAAAACGTCGGCGTGCGCCGTGGCTCCAAGATGTTCAGGCACGCTATTCTGGCCGTCGCGTACATCAGCGAGGAAAAGATCGCCGCCAAAATGCAGTTCTTGATGAAGACATTAAAGTGGTCAGACGCAGAGGCGAGGATTGCGGTGTCCAAGCTTCCTGTGGTGCTGAGGAGCTCGGAGGACAAGCTGAGCCGTGTGTCGGAATTCTTGATCTCTGAGGTCGGGTTGGAGCCGGCATACATTGCTTACAGGCCGGCAATGCTCACTTATAGCCTGGAACGCCGGCTCATGCCCCGGCACTGCGTTCTGAAGTATCTTAAGGACAATGGATTGATAGAATCCGACAAGAGCTACTATAGCGCGGTCCAGGTGACCGAGGAGGTCTTTGTGGAGAAATACATAAGTCCATACGAGGACACTGCGCCGCACCTTGCTGAAGACTATGCTGCTGTATCCAGCGTAAAGATACCCACCAGATTCAGATTGAAAGGACCAAAAACAGGCCATGCAAGTGCGCAAACTGCCTAA</cdnaseq>

Protein Sequence

<aaseq>MAARRRLLLLLALLLCRLAAVLPTSEVEALQGFMAGFAGSNAAFQSWDASAPNPCTWFHVTCGPGNQVIRLDLGNQSLSGELKPDIWQLQALQSLELYGNSISGKIPSELGRDLSHNNLSGIIPTNGSFSHFTPIREIALGSARGISYLHEGCDPKIIHRDVKAANILLDEKLEAVVGDFGLARIMDYKVSHVVTGVMGTLGHIPMEYLTAGRTSDKTDVFGYGIMLFELISGKRGFDLVGLANEENARVHDWESAPSRPRMSTVVTMLEDGIAEHWDAWQRKTIVQASLQGGQGVSEARNDSVANLPPDTLSGPRKDKILQKLRFWFWGICNAKPQATKASKSISHLKSPSRPDAVVAFLAGLGLSAADIAAAVAYDPRLLCAEVDRTLAPRLAELAGLGLSPSQIARLVLVDPARFRRPTVISKLQYYVPLFGSFETLLQALKNNSYLLSSDLEKVVKPNVALLRECGLGACDIAKLCIPLPRLLTTSPERVRDMVAQAENVGVRRGSKMFRHAILAVAYISEEKIAAKMQFLMKTLKWSDAEARIAVSKLPVVLRSSEDKLSRVSEFLISEVGLEPAYIAYRPAMLTYSLERRLMPRHCVLKYLKDNGLIESDKSYYSAVQVTEEVFVEKYISPYEDTAPHLAEDYAAVSSVKIPTRFRLKGPKTGHASAQTA</aaseq>

Gene Sequence

<dnaseqindica>1..79#204..336#421..492#1007..1057#1426..1497#1898..2249#2862..3049#4873..4936#5289..6308#ATGGCCGCGCGGCGGCGCCTCCTCCTGCTCCTCGCCCTCCTGCTGTGCCGCCTCGCCGCCGTCCTCCCCACCTCCGAAGGTACGCACGCGCTCCCTCGCTCCCGCCCACCCCCTGTTCGATGAAATCGCTGGCTCGCTCGCTGCGGCGGCCTCGCGTGTTCGATCGATTGCGATTTTTTATTTTTTATTTTTTTTGGGTGCAGTGGAGGCCTTGCAGGGTTTCATGGCAGGGTTCGCCGGCAGCAACGCGGCGTTCCAGAGCTGGGACGCGTCCGCGCCCAACCCTTGCACCTGGTTCCATGTCACCTGTGGCCCGGGGAACCAGGTCATCAGGCTGTAAGCATCTACTGTACTACCTGCTGCAGTGTTGATCACTAATTCACTGGTGCTACTGCTGAATGAATTTGCATCTTCGCGCAGGGATCTCGGGAACCAGTCGCTGTCCGGCGAGTTGAAGCCCGACATTTGGCAGCTGCAAGCATTGCAATCCTTGTGAGTTTGTCGATGCTTATTTGCTCATTTCTTCCATGGAGAATATTGGGTTGGGTTGCATCTTTTCACCGATCAGACAGCACTGGTAGTAGTACCCATGCCTGCTATGAATGTTTCCGTTATGCCCAGTGATGTAGCGTATGCAATGCATATGCCCTTTTTCCATCTTGCCTCTCGTTTATTATATGAGTAAAAATAATGTTGTTTCTGGTCTACTCCCTCCGTCCCAAAAAAAAAGACAAACCCTGGTTTCCGTGCCCAACGTTTGACCGTCCGTCTTATTTGAAAAAAATATGAAAAAAATTAAAAAGACAAGTCACGCATAAAATATTAATCATGTTTTATTATGTAACAACAATGAAAATACGAATTATAAAAAAATCTCATATAAGACGATGCATCTTGCGAAAGCATACTATACAATATCACTATATGAGTCTTCCATTGGAATGTTGGTCATTTTCTATTCTCAGATTTGGTGATTCTTTGTGACTAATGTATCTTTTGGCAGCAGGGAACTTTATGGCAATAGCATCAGCGGGAAAATACCTAGCGAGCTTGGGCGGTTAGCTAGCTTGCAAACTTTGGATCTCTACTTGAACAATTTCACCGGTGAAATACCGTATGAACTGGGAAATTTATCGAAGCTCAGTAACCTGTAAATATTCTCATCTCTGCTTTAAATAATTTGTATTTGATGTTAAATTTTATGTCTTATGATATCACATAGCCTGTGAAAAATTAATGTAGAATTTACTACTCCTGCTCTTTGACTTTGCGTGCAAGGATAGCCGTCTGAACAACAATAGTCTGTCAGGTGCAATTCCCATGTCATTGACAACAATCCAAAATCTTGAAGTGCTGTAAGTTCTCTGCTACACCATGCCGCAAGATGCCGCAATTGAGACGCTGATATGCTAATTATTCATTCAGGGACTTGTCACATAACAACTTGTCGGGAATAATACCGACCAATGGTTCATTTTCACACTTCACCCCAATCAGGTTTGCTTGGCCTCTAGTGATTATGTCGATTCAACAATGCATTATGACTGGTGTGAAATTTTGTAATTGGGTCTTGCAGTTTCTCCAATAACCCACGTACTTTCGCAAATTCTTCTGATTCGCCATCAAATAACTCGGGAGCAGCGGCGCCATCAGGTTGTCTGTTAATTCCTTACTCTGGAGTGATAAACTGCATTATTTCTGCAGCTGTTTCATTATTCTGTGTAGAATCCCATACACAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCACTACACAGAGTGCTCTGATTCACAACAACCACTTGACTGGCCAACACGAAGAGAAATCGCGTTAGGGTCTGCAAGAGGGATCTCTTACTTGCATGAAGGATGTGATCCCAAAATTATCCATCGAGATGTCAAAGCTGCTAACATTTTGTTGGATGAAAAACTTGAAGCGGTTGTTGGTGATTTCGGTCTGGCTAGAATTATGGATTACAAAGTTTCCCATGTTGTAACCGGTGTGATGGGGACATTGGGGCACATTCCCATGGAGTACCTGACTGCAGGAAGAACTTCAGATAAAACTGATGTTTTTGGGTATGGGATCATGCTTTTTGAACTTATTAGTGGGAAAAGGGGATTTGATCTTGTTGGTCTTGCAAATGAAGAAAATGCCAGAGTGCATGATTGGGTAAGTCATGCTTTGTTGAATCTTCCCTTGTTTTGCAGGATATGTCTTTTCTCAAGCTATTATATTCTGTCAGTTATATTGACTACCTCCCATGCTTTACATTTGACATTATAATTTGCACTATAATCTCTAGTTTCGATTCTTATTTCTAGGGACAACATGCTAATGTCTTCAATGAACCACTTAATTCATACTAGTATTACTGAAGCAATCCTTATGAAACTCCAACTTTCTTCAATAGATCAAACACGTCTACCTCCCTAATCATTAGTAGTTCGCGCGATTTCATTTGTTAAAAAACAATATTGACTGCAAATTATGCAGATATTTACTTCTGTTGATCTCTTTAACTTGGAACGACCTACATACACTGTAAACTGGTTACCATTCTTACTTCATATTGAATTGAATTAAAACAAAAGAGTCCCCCTTCACACAACTACATGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGAACAGGGAGTGCGAGAGGAGCTGAGTTTGCTGGTGCAGATTGCGCTGCTCTGCACCCAGGAGTCCGCTCCAAGCCGCCCCAGAATGTCAACGGTGGTGACAATGCTAGAAGACGGTATCGCGGAGCACTGGGATGCATGGCAAAGGAAGACGATTGTGCAGGCAAGCCTGCAAGGAGGACAGGGCGTTTCTGAGGCTCGCAATGACTCTGTTGCAAATCTCCCTCCAGACACATTGTCTGGTCCAAGGTGACTGCCACCTTAAGGACTATGAAGGGTGGTTCTTCTTTTGTAGAGCTTAGTGAACTTAGACAGAACACTTGCCATTCTTAAAAAAACAGCAGATTATATGTTTTCTTGTAGCATGTGTATGTGTTTTAGTTTTTCCCCTTTTTTTCCAAGTAATTCATAATCACTACTAGACACAGGGCTTTCAGAAACTGTTCAGAAACCACATCATAGTTATGCTAACGCATCAATACATGTGGTTGTGCTACTCCAGGATAATCAAAGGCGGTTATTTAACCCTCTCTGAAAAAAAAAAAAAAACATAACTAGAGATGGCTCGAAGGTGAGCTGTAACCTATTGCCAGAGATATATCAATTTTGAATCAAAGAGTACTCTAAATCTGGCCATTTCCTATCCATTTTGCAACAGCTGATTTTATATAATATTCTTGTGAAGTGTTAACTTTAGGTAGTCTTCTATATTTTCATGGAAAGAGTATATGCGCTACCAATTTTTTCAAAAAGATAACAATCTTGTAAGCATTCCCAATTTGACGCATTCAGCCCAACAACTTGGATCATCGGGTGTTGGTTTAGTCCTTAATGCCTTTTTGTTGCTAAGTGGAGTAAGTAATTGCCATAAAACCTTTGATGTCTCAATCCCCAGAGCTACAAGATGCAACAAGTACCAAACAACCTACATGCTTTTTCACCAGAAGAGTCAACATTAGACATTACAAAATGAAGTAACAGGGGACAAACCGTAATATCTTGCATTCTTCCGCAGTAATTGAGCCAAATTCCCCAGCACAAACTTTAGCGCATAATCCATTTCTGTCTACACACCAAGCAGTGAAGCAACTCCATTTGCTGTTTCCCCGGCACAACTGGACGTATAAGCATCAGCGAGGCCTGGAATGTGGCACTTGTAAGGATCCACAAACTTCCGCACAAACTTCCTCTCACTCCTCGCGGCTGTGTTGTAGTAATCCAACTCACAATCCAGCAATCCCTTCGTCCTGAGAACCTTGAGCAAGTGATGCCGAGGCAACAATCGCCGCTCAAGGCTGTACAAGAACAACACTGGCCTATGCGCAATGTACCGTCCCTCCACCCGACATCCCTCTTCAAGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCTCGGTAGTTCTCACTGTCTTAAATAAAAAGAATTTTTAAAGAGATATAATATATTTTAGTACTACGTGTTTTAAAATATAAGAGATTTTGGATATCGAGATATCCCTCCAAAATTTGTAGGACGGAGGGAGTGTTAAAGTTGGTTTTGACTTGCATATCGCCTACGTGACTTGTTGCCTCATTCTTCATCCTATATCCATATGGCTCCTACACGATGTAGAGGCAAAATAAGTAAATAAAATAAAAACACCCGTGGAAATTATGTCATTAAGAGTCTTGCTAGAATAATATAAAACAATATTATGCATTATTCTAAGCACTAAGATTTAAATCATAGTACTCACAAATACTATGCACACGCGAATAGGCTTTCAATAAAATTTTAGTGATAGATATGTGTCACTGATCTCCGTCTCTTTGAGCACGTCATCCATGCAATAAAAAAAAACCTCAAATTCAGCGGTTCAACTTGGGTGTGCAAATATATGCATGAGTGTGGTGTGTACATACGCATCATCCGTGTGATTGAAAAAATAGAGGCAAGAGATGAGAAAGAAACTAAAGCAATATGAAAAATTGCGTGTTTTTGCGTACGTGTTAATTAGAAAAGATAAAATCTTACAAAAACTGAGGTTTTGGTTTTGGGGTATCTGTAATGCAAAACCTCAGGTTTTACAAATTGCTTCATGAAATCCTAAGTTTTGGGTAAAGTGTTTCATAAAACCCCATCTAAAAGCTTATATCGTCTATCCAACTAACATATTTATCTATAACAATTGTAAAAATGGTATGAGATATTTTTTAAGTTCATGTACACGTGAGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACCGCCTCCACCCTCCTCTCCCTCCGCCACCATGGCCTCTTCTCCCTTACCCGCTTCTCCGCCGCCGCCGCCGCCGCTAAATCCGCCGGCCACTTCGCCGTCGAGGAGTACCTCGTGGCCACCTGCCACCTCACCCCCGACCAGGCTACCAAGGCCTCCAAGTCCATCTCCCACCTCAAGTCCCCGTCCAGGCCCGACGCCGTCGTCGCCTTCCTCGCCGGCCTCGGCCTCTCCGCCGCCGACATCGCCGCCGCCGTCGCCTACGACCCGCGCCTCCTCTGCGCGGAGGTCGACAGGACGCTCGCCCCGCGCCTCGCGGAGCTCGCGGGCCTCGGCCTCTCCCCCTCGCAGATCGCGCGCCTCGTCCTCGTCGACCCCGCCCGCTTCCGCCGCCCCACCGTCATCTCCAAGCTCCAGTACTACGTCCCGCTGTTCGGATCCTTCGAGACCCTCCTCCAGGCGCTCAAGAACAACTCCTACCTCCTCAGCTCCGACCTCGAGAAGGTTGTCAAGCCCAACGTCGCGCTCCTGCGGGAGTGCGGGCTAGGTGCTTGTGATATTGCTAAGCTGTGCATCCCGTTGCCGAGGCTGCTCACCACCAGCCCAGAGCGTGTCCGAGATATGGTGGCTCAAGCAGAAAACGTCGGCGTGCGCCGTGGCTCCAAGATGTTCAGGCACGCTATTCTGGCCGTCGCGTACATCAGCGAGGAAAAGATCGCCGCCAAAATGCAGTTCTTGATGAAGACATTAAAGTGGTCAGACGCAGAGGCGAGGATTGCGGTGTCCAAGCTTCCTGTGGTGCTGAGGAGCTCGGAGGACAAGCTGAGCCGTGTGTCGGAATTCTTGATCTCTGAGGTCGGGTTGGAGCCGGCATACATTGCTTACAGGCCGGCAATGCTCACTTATAGCCTGGAACGCCGGCTCATGCCCCGGCACTGCGTTCTGAAGTATCTTAAGGACAATGGATTGATAGAATCCGACAAGAGCTACTATAGCGCGGTCCAGGTGACCGAGGAGGTCTTTGTGGAGAAATACATAAGTCCATACGAGGACACTGCGCCGCACCTTGCTGAAGACTATGCTGCTGTATCCAGCGTAAAGATACCCACCAGATTCAGATTGAAAGGACCAAAAACAGGCCATGCAAGTGCGCAAACTGCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021625

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021625&oldid=44150"