BGIOSGA021634

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Revision as of 13:04, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021634| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021634, complete gene.| tag = P0638H1...")
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Gene Name

BGIOSGA021634

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021634, complete gene.

LocusTag

P0638H11.29

Ensembl Transcript ID

BGIOSGA021634-TA

Ensembl Protein ID

BGIOSGA021634-PA

Length

5230

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:7419295..7424524

Sequence Coding Region

7423322..7424524,7422974..7423029),complement(7422639..7422872,7422070..7422361),complement(7420640..7420836
,7419295..7419448

Genome Context

<gbrowseImage1> name=IndicaChromosome06:7419295..7424524 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:7419295..7424524 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAATGGAGACAAGGATGAGAAAAATGTTGCTGTCACGGAAGGATCTACCAATTCTGAAGAAAAGGATCAAGATGAGGATTTGTTGAGGAGAACAGAAATGCTGAATGCAAAAGAAGCAATAAATTCTTCAAATGAGAATTCAGGCAATGATTCAGAAGCACAGATCCATGTGAGAGATGATTCACAAAAAGAATTCAATGAGAAGATGAATAAAGAAGGAAGCTCAGATCCAATGGAACCTACAGATTCAAGCCAGACAGAGGAAGATATCCTTGCTGAAGACAAATCTGAAGAACCTGTTTTTGATGGAACTGAGGTTGCTGAAATGGAAGATTTGAGGCGTTCGTCCAATCAATCTGTGGAACTTGATTCAGATGCCCATGGGTCTGTACTCAATGAAAGAGCTACTGCAATCAAGAATTTTGTTAAGGAAAAGGGTGCCATTGCAGTTTCAACATTTATAAGGCGCCTTTCTGGCAAAAAGGACGAAAATGAATTTTCTGTTGAAGATGAAAAGAATGAAGGATCAGAAAGCATCAGTAGTGGCAATATTGGCTCAGATGCTGAACCTAAATCAAAAGAGGTGCAGCCCAAATCTGAGGAGAGAACTACATGGAATCCACTCAACTTGATTAAAATCGGACGAGATTTTGATACCTTCATGACTGGGGAAGCTGGGCATGAAAATGTGCCAGATTTGATAGAGCAACCAACAGGGAAGGGAAGAATTATTATATACACAAAACTGGGTTGTGAAGATTGCAAAATGGTTCGCTCATTCATGCGTCAAAAAATGCTCAAGTATGTTGAGATCAACATCGACATATTCCCCAGTAGAAAGATGGAACTAGAAAATAATACTGGGTCATCCACAGTACCAAAAGTGTATTTCAATGACTTGCTGATTGGAGGGTTAACTGAATTGAAGAAAATGGAGGAGTCTGGCATTCTTGATGACAGAACTGATGCTCTTTTCAAAGATGAACCCTCATCTGCTGCTCCGTTGCCTCCCTTACCTGGAGAAGATGATGAATCTGGTAGTGGGAAGATAGATGAGTTGGCAACCATTGTCAGAAAAATGAGAGAGTCAATCACTCTGAAGGATAGATTTTACAAAATGAGAAGATTTAGCAGCTGCTTTCTTGGTAGTGAAGCTGTAGATTTCTTATCAGAAGATCAATATTTAGAGAGAGATGAGGCGGTGGAATTTGGAAGAAAGCTTGCAAGCAAATATTTCTATCGCCATGTTTTAGACGAAGATGTATTTGAAGATGGAAATCACTTGTATCGCTTCCTGGATAATGATCCCATAATTATGAGCCAGTGCTACAACATCCCTAAGGGTATCATTGATGTTGAACCGAAACCAATTGTTGAAGTGGCATCAAGGTTAAGAAAGTTGTCTGAAACCATGTTTGAAGCTTATGTATCTGAAGATGGTAAACATGTTGACTACAGAAGCATCCAGGGTTGTGAAGAATTTAAAAGGTATGTTAGAACAACTGAGGAGCTCCAGAGGGTGGAAACCCATGAGTTATCACGGGAAGAAAAGCTCGCTTTCTTCATAAATCTCTACAATATGATGGCTATCCATGCATTAGTGACATGTGGTCATCCTGCTGGACCATTGGACAGGAGAAAGTTCTTTGGAGATTTTAAGTATGTCATTGGTGGATGTGCTTATTCAATGTCAGCTATTCAAAATGGCATACTGCGTGGTAACCAAAGGCCACCATACAACCTTGCCAAGCCTTTTGGACAGAAAGACCAAAGATCCAAGGTGGCCCTTCCATATGCTGAACCTCTTGTTCACTTTGCTTTGGTATGTGGGACCAAATCTGGACCTGCACTTAGGTGTTACTCGCCAGGAAACATCGATAAAGAACTGGTGGAAGCTGCACGTGATTTCCTAAGAAATGTAGGAATTGTTGTTGATCCTGAAGCCAAGGTTGCATCTGTAAGCAAGATTTTGCGATGGTATAGCACAGACTTTGGTAAGAACGAGACGGAAGTGCTGAAGCATGCGGCAAATTATCTGGAACCAGCAGAGTCGGAGCAATTCTTGGAACTACTTGCGAACACTCAACTGAAAGTCTTGTATCAACCCTATGACTGGAGCTTAAACATTTAG</cdnaseq>

Protein Sequence

<aaseq>MENGDKDEKNVAVTEGSTNSEEKDQDEDLLRRTEMLNAKEAINSSNENSGNDSEAQIHVRDDSQKEFNEKMNKEGSSDPMEPTDSSQTEEDILAEDKSEEPVFDGTEVAEMEDLRRSSNQSVELDSDAHGSVLNERATAIKNFVKEKGAIAVSTFIRRLSGKKDENEFSVEDEKNEGSESISSGNIGSDAEPKSKEVQPKSEERTTWNPLNLIKIGRDFDTFMTGEAGHENVPDLIEQPTGKGRIIIYTKLGCEDCKMVRSFMRQKMLKYVEINIDIFPSRKMELENNTGSSTVPKVYFNDLLIGGLTELKKMEESGILDDRTDALFKDEPSSAAPLPPLPGEDDESGSGKIDELATIVRKMRESITLKDRFYKMRRFSSCFLGSEAVDFLSEDQYLERDEAVEFGRKLASKYFYRHVLDEDVFEDGNHLYRFLDNDPIIMSQCYNIPKGIIDVEPKPIVEVASRLRKLSETMFEAYVSEDGKHVDYRSIQGCEEFKRYVRTTEELQRVETHELSREEKLAFFINLYNMMAIHALVTCGHPAGPLDRRKFFGDFKYVIGGCAYSMSAIQNGILRGNQRPPYNLAKPFGQKDQRSKVALPYAEPLVHFALVCGTKSGPALRCYSPGNIDKELVEAARDFLRNVGIVVDPEAKVASVSKILRWYSTDFGKNETEVLKHAANYLEPAESEQFLELLANTQLKVLYQPYDWSLNI</aaseq>

Gene Sequence

<dnaseqindica>1..1203#1496..1551#1653..1886#2164..2455#3689..3885#5077..5230#ATGGAGAATGGAGACAAGGATGAGAAAAATGTTGCTGTCACGGAAGGATCTACCAATTCTGAAGAAAAGGATCAAGATGAGGATTTGTTGAGGAGAACAGAAATGCTGAATGCAAAAGAAGCAATAAATTCTTCAAATGAGAATTCAGGCAATGATTCAGAAGCACAGATCCATGTGAGAGATGATTCACAAAAAGAATTCAATGAGAAGATGAATAAAGAAGGAAGCTCAGATCCAATGGAACCTACAGATTCAAGCCAGACAGAGGAAGATATCCTTGCTGAAGACAAATCTGAAGAACCTGTTTTTGATGGAACTGAGGTTGCTGAAATGGAAGATTTGAGGCGTTCGTCCAATCAATCTGTGGAACTTGATTCAGATGCCCATGGGTCTGTACTCAATGAAAGAGCTACTGCAATCAAGAATTTTGTTAAGGAAAAGGGTGCCATTGCAGTTTCAACATTTATAAGGCGCCTTTCTGGCAAAAAGGACGAAAATGAATTTTCTGTTGAAGATGAAAAGAATGAAGGATCAGAAAGCATCAGTAGTGGCAATATTGGCTCAGATGCTGAACCTAAATCAAAAGAGGTGCAGCCCAAATCTGAGGAGAGAACTACATGGAATCCACTCAACTTGATTAAAATCGGACGAGATTTTGATACCTTCATGACTGGGGAAGCTGGGCATGAAAATGTGCCAGATTTGATAGAGCAACCAACAGGGAAGGGAAGAATTATTATATACACAAAACTGGGTTGTGAAGATTGCAAAATGGTTCGCTCATTCATGCGTCAAAAAATGCTCAAGTATGTTGAGATCAACATCGACATATTCCCCAGTAGAAAGATGGAACTAGAAAATAATACTGGGTCATCCACAGTACCAAAAGTGTATTTCAATGACTTGCTGATTGGAGGGTTAACTGAATTGAAGAAAATGGAGGAGTCTGGCATTCTTGATGACAGAACTGATGCTCTTTTCAAAGATGAACCCTCATCTGCTGCTCCGTTGCCTCCCTTACCTGGAGAAGATGATGAATCTGGTAGTGGGAAGATAGATGAGTTGGCAACCATTGTCAGAAAAATGAGAGAGTCAATCACTCTGAAGGATAGATTTTACAAAATGAGAAGATTTAGCAGCTGCTTTCTTGGTAGTGAAGCTGTAGATTTCTTATCAGAAGATCAATATTTAGAGAGAGATGAGGTACGATATCAACTGCTGCTTATTAATAAAACAACTTCTAGCAATGCTGTATGCAGAACTCAGCCCCATATAGCTCTGAAACAACATTAATCTTATGTCCCTTTTTCAGTTGGCTATTGGTGGAAAAAAAGTACTCATAACTGTATCTTTGAAATGATTTCATTCTTTGGAAAGAAAAATATCCATTTTATTTTGTTCCTATAAGAATATAGTTTATCTTTGAAGGGATACAGAGGAAATTAAATTTAGTTATCACTTTCCAAAAACTCACCGATATATATTTTCCATGTAGGCGGTGGAATTTGGAAGAAAGCTTGCAAGCAAATATTTCTATCGCCATGTTTTAGAGTAAGTTTTGGAAATTATCTTATATAATATTCTTTTCGTTTTATTTTTTTTTCCATACATATCAATTTGCAATATTTACATCTGGCATTCTGACTTTGCAGCGAAGATGTATTTGAAGATGGAAATCACTTGTATCGCTTCCTGGATAATGATCCCATAATTATGAGCCAGTGCTACAACATCCCTAAGGGTATCATTGATGTTGAACCGAAACCAATTGTTGAAGTGGCATCAAGGTTAAGAAAGTTGTCTGAAACCATGTTTGAAGCTTATGTATCTGAAGATGGTAAACATGTTGACTACAGAAGCATCCAGGGTTGTGAAGAATTTAAAAGGTTAGCACTTAGAACTATATGCTCATTGTCAAAGTATACTGCATAATCAATGTATTTCTTGCCAGCAGATATTACTGTGAACAATGTTGTATTGCTCTAGTTGGCTAATTTTAATTGATACAGATGTTTAGGTTCATAATGTGAGCTGGCCTTGAATATGTATATCAGTTTATTTTTATAATGTTATGTGATATACAAATATAATATATTTCAGTTGTTGCGGTTATCCTATTGTGATGGTTGACGGGTATGCTGTACTAACATATTTCTTGCATAGGTATGTTAGAACAACTGAGGAGCTCCAGAGGGTGGAAACCCATGAGTTATCACGGGAAGAAAAGCTCGCTTTCTTCATAAATCTCTACAATATGATGGCTATCCATGCATTAGTGACATGTGGTCATCCTGCTGGACCATTGGACAGGAGAAAGTTCTTTGGAGATTTTAAGTATGTCATTGGTGGATGTGCTTATTCAATGTCAGCTATTCAAAATGGCATACTGCGTGGTAACCAAAGGCCACCATACAACCTTGCCAAGCCTTTTGGACAGAAAGACCAAAGATCCAAGGTGAACAGAGCAGATCTCAGCCAAAAAAAGGGGAAACAAAGTTCTCTGATATGATTGCTTTGTTTCCCCCCATATGTCATGATAATACCTGTAGCCCTCTTAAAGTTTTTGTCTGATATATTTCCATTATACCAAGCAATGCTACTTAATTCTACAATTGCCTCCAGGATATATATGTTTGGAAAAAATGTGTATCAGCTATTATGTTTGGAAATTGCTTTACCTGTCTAGGGTCTATTCTGCAGTTCTTCTTAGGTAGGCAGCTGAAGGGGTATATGCTTGATGCGTTATGTGGATGTCAAAAAATCACTAAAATGACACGTACCATCATGGCTAATTTTCCTATCATTTATCCCCCGATTTTCTGAGTAAAAAGAAAACACTTTTCTCATAAACATGTATTGTATCTGTTGTTTCGGAAACATACAATTTTACTAGTATTTTCAGGCCACATTATATAAGTGAAGACCTTGGGCATTTAGAGCCTAATTATTAGTTAGAGGAAAGGAATATAGAAGGCCCGTTGTATATTTGATTTATTATCTGTATGTGTTTTTGGGAGCCATAGCCTAGCGGTCATGGTGCTCAAGTAGCACCTCTAGGTCCTAGGTTCGACTCCCCATGGGATCGAATTTTAGGTTTGGTTAAAAAAGGTCACTCGTTGTCACTGGCCCCTTTAAAACACATGTTTAGAATTGACCTATGGAGGGCGGGCCCTCGTGTACGGGTTAAGGACCGACCCATACGGGGCAAGTCCGTGTGTGAGGGGCCAGGGTTCGTAGTCTTTCTCGGCCGATTTGGTTGAGGCTTCCTATTCTTAATGAAAAGCCATAGGGGTGGTCATTCCCCCGCCACCGCCAGTCGAGGTGTTTTTTTTCTTTTTCTTTCTGGAAGTCAGATTTAGGATATTTTTTAAAAGGTAAAAGTCTGTTTATAGAAGTCGACTACTATGCTGTAATGGTTGTTTTCAGTACCTATTTGCCAAAAATAGCCATACGAAGTGGCAACAGCCTTTACCATATCTGCAATATAATACGGGTTACATCCCATTGATCAATCCCCATTCACTGGTTACATGCATGAGTACTGGCTTTAGCAGCATTTCTTTGAATCATTTTTTTATTACTCCCAATTAATTAATTCATCAAACTTACATGTCAGACGTGAGTTTGCACCAATGCTGATTTTCCAATGATGATAAATTCTCCTTTTTTCCTTGTCTGTAATTTGCAGGTGGCCCTTCCATATGCTGAACCTCTTGTTCACTTTGCTTTGGTATGTGGGACCAAATCTGGACCTGCACTTAGGTGTTACTCGCCAGGAAACATCGATAAAGAACTGGTGGAAGCTGCACGTGATTTCCTAAGAAATGTAGGAATTGTTGTTGATCCTGAAGCCAAGGTTGCATCTGTAAGCAAGATTTTGCGATGGTAAGAACACTATTATTCTTGCTTCGCAAATAGGGCCTTGAGAGTTTAATAAGTGCTTTCTTATTAGTGTACCCCATCTAAACTTGTCATCAGAATGTACAACTGCAGGAACATATACAAGAATGAATTTTATGTTAGGTAGTTTAGTTCATGATGCAGGGACATAAACAACAACGAATTTTATGCTAGGTAATTTAAATTGTTTTTGAGCCTTCTGGTTGGAGAGAAAAAGTAGATAACACGTACCACTAGTGCCTGCTAGTTTTGGGCTACTTGAATATACTCTATGGTTAACCTAGCAGCAAAACCAGAAAAATCTGTTAATTACCTGGCTTAGCAGTAACCCCTATCATAGATCAGAACCACCTGAAAAGTTCTGTACAATTTATAGTTACCGCATCTTACTACAAGAGTACAAGGTTAGGTGTGGCTTTGTGGGAGGCATGAAGACCATTGAAGGCTAGGTTCTGATGTCGAGCACCTATAGGTCACTGATTTTATTTTCTCATTTCCATAAGAAGTCCAAATTGGAGTGTGAAAGTTTTGAACAAAATACTTTAGATAATGTCGATAAGGCCTGGATTTCAAGAAAAAAACATTTTTCTCTAATCTGCTCTCGGTATAAATTGTATGTGAAAAATGGTGAGGAATTCCCCCAAAATGGTTACCCAATTTTTAGCTCTTGCATGGTTACATGAGCAAGACTAATGGAAGAATGTGAATTCACTGGTTAATCAATTTAAGAAAATAATAATATGCAAATTTTATCCATTTTACTACATTATACATGATACTCCCTCCGTCCCCTAATATAAGGGATTTTGACATTTTGCTTACACTGTTTGACCATTCGTCTTATTCAAAAATTTTTGGAATTATTATTTATTTTTTTGACTTAGTTTATTATCTAAAGTACTTTAAGCACAACTTTTCGTTTTTTATATTTGCACAAATTTTTTGAATAAGACGAGTGGTCAAACAGTGTAAGCAAAATGTTAAAATCCCTTATATTAGGGGATGGAGGGAGTACATCATAATTCGATATGCAATTGGGGAACTTGTGGCAATGAATAACTGAAAGGAAAATAAAATGGCTACATATTTGTAATGGTGACATTATTATTATTTGGCCAGTGCTTTAGTAAGAAGTTTCTCATCTGAAGCTCATTTGGTAAATAAATAATTTTTCAGGTATAGCACAGACTTTGGTAAGAACGAGACGGAAGTGCTGAAGCATGCGGCAAATTATCTGGAACCAGCAGAGTCGGAGCAATTCTTGGAACTACTTGCGAACACTCAACTGAAAGTCTTGTATCAACCCTATGACTGGAGCTTAAACATTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021634