BGIOSGA021656

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Revision as of 13:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021656| Description = BGIOSGA021656| Definition = Oryza sativa Indica Group BGIOSGA021656, complete gene.| tag = | tid = BGIOSGA021656-TA|...")
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Gene Name

BGIOSGA021656

Description

BGIOSGA021656

Definition

Oryza sativa Indica Group BGIOSGA021656, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA021656-TA

Ensembl Protein ID

BGIOSGA021656-PA

Length

7695

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:7017993..7025687

Sequence Coding Region

7025536..7025687,7025316..7025454),complement(7025154..7025235,7024898..7025036),complement(7024152..7024218
,7023810..7023984),complement(7023512..7023576,7023361..7023423),complement(7023218..7023290
,7022548..7022639),complement(7021259..7021330,7020714..7020770),complement(7017993..7018175

Genome Context

<gbrowseImage1> name=IndicaChromosome06:7017993..7025687 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:7017993..7025687 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCGCCGGCGGAGGAGTTCGCCGTCGACGACCTCGACGAGTTCGAGAGTCGCCTAGACAGTTTCCTCAACCGCTTCCACGCCGACGACCTCCGCCGCATCCTCCTCCCCGACCCGGACGGCAAGCTCCATTTCCCCCTCGTCATCGACTTCGCGGAGCTCCTGGAGTTCGACCCCGAGGTCGCCCACCAACTCTACGACTACCCCAAGGACGTGCTCGAGCTGTTCGACGCCGCCGCGCAACGCGCCCTCGACAAATTCGATGCCGCCGCTCGACGAGCTGACAAGAGGAAGGCGGGCGACGAGACAATGGAGAAGAAGTTCGTGCACGTGCGCGTCAACACCTCGGGGTCGGCACTCGAATGCCCTGAAGCGTCCCCGAGCATTGGGAAGGTGAGGGTGAAGCACAGGGGAACTCTGCTCACTTTGAAGGGGACCGTGATCAGGTCCGGTGGCGTGAAGATGATCGAAGGCGAGAGGAAGTATCAGTGCAGGAAATGCAAGTGCAGGTTTACGGTTCATCCTGAGCTTGAGGCTGGGAATCGTATAACTCTTCCTGCATCTTGCAAATCCAAGAGTGCAAAAGGTTGTGGAGGTGCCAATTTCCAATTGATAGAAGATAGCATAACCTGCCATGATTACCAAGAAATAAAAATCCAAGAAAATATACAGCTTCTAGGTGTTGGGTCTATACCCCGTTCGATGCCTATAATTTTGATGGATGATCTTGTTGATATTGTTAAAGCTGGGGATGGGAGAGGGTACTTGGCCAATGCAAAGATGTATGTTTGCCCTTCATGTAGAGGTGCAGGAAGAGTTACCATTCACCCATTCACATCCATTTGTACTTCTTGCAGAGGCTTTGGGAAAGTAATTAAGGATCACTGCCTGACATGCAAAGGTTCAGGGGTGGTAGATGGCATGAAATATGTAAACGTGACCGTTCCAGCAGGGGTCGATTCTGGCGATACAATTCATGTACCGGAGGCTGGACATAGTGGTGGACGTGGAACCCTACCTGGAAGTTTGTACATTAAGCTTCAAGTAGCAAGTGATCCGGTGTTTGTTCGTGATGGTGCTGATATCCATGTAGACAAAAAGATTAGCTTCACACAGGCNATGCTTGGTGGAAAAGTTGAAGTGCCGACTTTAGATGGCACAGCAGAAGTTAAGATGGAAGATATTCCTGTAGTGCAGAACTGCTACCTCATCTCTAGCGGTGCACTCAGGGATTCATCTGCTACACCTTCACTCAGTCTGGATGCACGCTTCGTGGATCACTCAGTCTGGATGCACGCTTCGTGGATGCGTGGGCCTGTTCACTTTGATGTCATTTTCAACCTTAACAAATTTTAG</cdnaseq>

Protein Sequence

<aaseq>MPPPAEEFAVDDLDEFESRLDSFLNRFHADDLRRILLPDPDGKLHFPLVIDFAELLEFDPEVAHQLYDYPKDVLELFDAAAQRALDKFDAAARRADKRKAGDETMEKKFVHVRVNTSGSALECPEASPSIGKVRVKHRGTLLTLKGTVIRSGGVKMIEGERKYQCRKCKCRFTVHPELEAGNRITLPASCKSKSAKGCGGANFQLIEDSITCHDYQEIKIQENIQLLGVGSIPRSMPIILMDDLVDIVKAGDGRGYLANAKMYVCPSCRGAGRVTIHPFTSICTSCRGFGKVIKDHCLTCKGSGVVDGMKYVNVTVPAGVDSGDTIHVPEAGHSGGRGTLPGSLYIKLQVASDPVFVRDGADIHVDKKISFTQAMLGGKVEVPTLDGTAEVKMEDIPVVQNCYLISSGALRDSSATPSLSLDARFVDHSVWMHASWMRGPVHFDVIFNLNKF</aaseq>

Gene Sequence

<dnaseqindica>1..152#234..372#453..534#652..790#1470..1536#1704..1878#2112..2176#2265..2327#2398..2470#3049..3140#4358..4429#4918..4974#7513..7695#ATGCCGCCGCCGGCGGAGGAGTTCGCCGTCGACGACCTCGACGAGTTCGAGAGTCGCCTAGACAGTTTCCTCAACCGCTTCCACGCCGACGACCTCCGCCGCATCCTCCTCCCCGACCCGGACGGCAAGCTCCATTTCCCCCTCGTCATCGAGTGAGTCCTCGTCCTCCTCCCCAGCTGCCGCCGTTCTCTCCCCCCTCCAAACCCTAACCCCGTCTCCCCTCCCTCTCGCAGCTTCGCGGAGCTCCTGGAGTTCGACCCCGAGGTCGCCCACCAACTCTACGACTACCCCAAGGACGTGCTCGAGCTGTTCGACGCCGCCGCGCAACGCGCCCTCGACAAATTCGATGCCGCCGCTCGACGAGCTGACAAGGTTAGTAGTCCAGGCGGCCGTACGACCTGCACCTGCTTGTTCCCCCCATTTTTTTTTTCTCAGAGACTCTTGATTCTCAGAGGAAGGCGGGCGACGAGACAATGGAGAAGAAGTTCGTGCACGTGCGCGTCAACACCTCGGGGTCGGCACTCGAATGCCCTGGTGAGCGCACGCATGCGACACCTGTGTTCGGCGTAATGCCCGTGTAGTTTTTTTTGGTGTTTTTGGGCAGTTGCTTACGGGCTATCGTGATTTGGTGGTAATGGTGGTGTTCGGCAGAAGCGTCCCCGAGCATTGGGAAGGTGAGGGTGAAGCACAGGGGAACTCTGCTCACTTTGAAGGGGACCGTGATCAGGTCCGGTGGCGTGAAGATGATCGAAGGCGAGAGGAAGTATCAGTGCAGGAAATGCAAGTGCAGGTTTGTTATGCATGTCTCAGGGCTTTATACCAGTATTAGTTGAAGACTGAAGCTTTTGCTTCTTCTATTAGAACCAGTGGGCTTGTGAAGTTGTGATGTATATATCCCTGGCTCTGGCTTGCGTATTAATTCTGCGGTTTAGATGGTGCTCACCGCTCAGTGGTCTACTGACAGAGCTGGTTTGGCAGAACCATAGAAAGCTTTTCTAAAGCAAAAGTTAACAGATTGTTTTTAGTACTTCCACAGTTCCACTCGTGCTCGCAAAGTGGCAGGATTGTCATTGTGTATTTGTGTTATACATTACTTGTAACACTGGCCTATTTGGGTTCCTAAGCTTGTAAGCCAAAAGCTGGGAAGTAAAATTAAGTATCTACGCAAGTGGGGTTAAGATTCTCTTGAAATTACTTGGAAAAACATTTTTCTAGATAACGACTTGAAAAAAAATGCATGAGGATTTAACTTCTTGAAAGCAGTAGATTTTGAAGAATCGGGAGGGGATTCAAAGATCAGAGCAATTTCGTGATTGCCTTAATATGAACATAATATTGCATTTTGTGCTACCTTAAGACATGATGACCTCAATACTTTTTACAAGGTTTGTGTTGATTAGCATGCTCATATATGTACGTGCTAAACTCTAGCCATACTGAACCTTTGACTTCTTTGGTATCTTGAACAGGTTTACGGTTCATCCTGAGCTTGAGGCTGGGAATCGTATAACTCTTCCTGCATCTTGCAAATCCAAGGTATTTCATGTCCTTGGCATTATTTTTCTCGTTCTACCTATAACGGTTCACCTGTGGTTAACACATCTGGTTATCACATTTTATATATTGTTATTTCTATATTTGTAATTGCTTGAACTTCTGCTACTACTATGAAGTTGCTCTTGCTAATTTTGCTATTGATCCAGAGTGCAAAAGGTTGTGGAGGTGCCAATTTCCAATTGATAGAAGATAGCATAACCTGCCATGATTACCAAGAAATAAAAATCCAAGAAAATATACAGCTTCTAGGTGTTGGGTCTATACCCCGTTCGATGCCTATAATTTTGATGGATGATCTTGTTGATATTGTTAAAGCTGGGGGTAAGCAACCTTTTCATATTCATGCATTTACGTAATTCTGTGGAACTAATAGTTGTCCTTTTTTGTTCTTTTATGTCTTAGTGGATAACATCATGGATTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATACAGTAGTCCACTAGTCTCATTTGCCATGCATTGTCCTTTCTTTTTTAGTAAAGCTCTCGTGTATTGTTTGATGTCAGATGGGAGAGGGTACTTGGCCAATGCAAAGATGTATGTTTGCCCTTCATGTAGAGGTGCAGGAAGAGTAAGTATTTGCTTTTATATTCAATTTTTCCTTTCTAACATGAATGCTGGATATGCTTTCTAAACATATGCACTGGTGGTTTGTGCAGGTTACCATTCACCCATTCACATCCATTTGTACTTCTTGCAGAGGCTTTGGGAAAGTAATTAAGGTAAGGGTTCTGCGAGTAACATGTCAGATTTTTCTTTTTTTACCCTATCTCATTTGTGATATTTTCACAGGATCACTGCCTGACATGCAAAGGTTCAGGGGTGGTAGATGGCATGAAATATGTAAACGTGACCGTTCCAGCAGGTGCTGTGCAGCTAACCTTAAATTATCATTGTTAGCCGGCTCCTTTCCCTGAAATGGCTACAATTGTCAAAATGATTTACATTTTTGCTGATTCCACTTAAAAAAATTTCAAATAAATTTCACAAAACCAAAAACTTCAAATAAATTTCACAAAACCCCAGGTTTGCGGGTATGCATAACACGACTTTACCAGTCATTGTAGCTCTATTACAGACACACGTCAGGCTAACACATGCCAAAACCTAGCTCTATTACTGACTACTGTGCCTTATCCACATATATTGCACATGCATTCTCGTGAAAAATGTAAAATCTAAGTTAGCTTGCATATATATTGCTCCATCTCTTTGCATTGACAGGTTCATTCAAGGAACATCTGGCATCTGGGTCGCTATGCTGTCATTCTAGTTCCTAGTTTTTTCTTTTCTCAATTGTAAAAAGGATGTTGCTTCCTAGTTTGCTAAGGTTGTTTTGACACTCTTTATAGGAATGACATGACATGTTGCTTACAATTAAACTTAAGTTAAGACTGTGAATTGTGTTTTCATGTTAATTAGTCCTTGTTTCACTCAACATAGGGGTCGATTCTGGCGATACAATTCATGTACCGGAGGCTGGACATAGTGGTGGACGTGGAACCCTACCTGGAAGTTTGTACATTAAGCTTCAAGTGAGAATATGCCTACATGAATGCTTGACCTTTTTTTTATGAACTAAGTTCTGTGAATATGTTGGTGCACATAGTTATTTATTATTGCTGACATAAGCCTATTTGACTTGTCCATGTTAAAAGTTTGGTGCTTAGTACTGAGGTGCTAATCAGGATAAGGAAGATAGGAAAACATGAGGACTACCATGTTTCGATTTGTCTTGGTAGAATGAAAAAAATATATTAATCAGTTTAAATAATTGTGCTTGTAGATTTTACTCGCTCCATTTTTGTTCGTTATTATGTTGAAGGTGATTGATGGGTTCTCCCCTTTGACATATTCAGCAACTTCCCAGATGATTTTGTCNAAACCTTTAAATCCACCTGAGATCCCATATTCAGTTGCATTAGTTTAAAGAAGACCNAATTGAAATAGCTGCAGTGGCATATATCTCTTTTTGAGTTTTTGTCCTCTATGCATGCATGCGTGCAGTTAGATTAGGACGAAAATATGAAAAAAAGCAAGGTCCGTTATGAAAGATTGAATGCCAATGAGCCATTCTTGTTGAGAAATTAAGAACTACACCCGCCCACCACACATACACCAATATGCTTTTTGCATGTTTCTTGCTGAAGCTTACTGGATGAGATGTATCAATAGAGACGGATAAAGTATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCTCTCACTACGTAGTTTGTTATGGATTAGTTTGCGTGTATATGTATTAGGACAGACTAGTTTCCGTCCTTTGGTTCATCCAAATATGTGAGTTAAAGAATCTATGACTCTGACCAAAATATAATTGCTAGTTGTTGCACTATAGGATTCCTCATCTTTATGCACGTTTGACACCATGGGACTTCATAAGTCTCTCTATGTTGTTTCATTGTCTTTCAGTTATGGTCATGTTCTCTGTTATTCCGGATGACCCTCCGAGTAGTTTGTTTTCTCGGTTATCCTGGTTAGTTAGATCTACGTAGTATAAATTCATGCAACGTACTGGCTTGTGCCATGTGTGAGCAGTACGCTATTAGCCTCAGCTACCATAAACTTGTATTATTTTATTGTACTATCAGCTTATCTCAATTCTCAAGCAACCAAGCTGCTGATTCTTCCATCAACTATGTATATCATAGGTAGCAAGTGATCCGGTGTTTGTTCGTGATGGTGCTGATATCCATGTAGACAAAAAGATTAGCTTCACACAGGTAGTAACAAATATTCCTTCTGTTATTAATATTTAATATAGAGTAAGCATTTGTAAGAAATACACTACTTTTCAGGAATATTTTCCTACTGCTAACATATGTACTCCGTAGCTTGCTTCCCTCTTAATATAGACTGCAAGTTATGCGAATCATTATTCTAATTACAATTCAAGAAAAATCTAGTCCATTCAGGCAATAAAAACTCTCCATTTTTCACTATAAATACTATCTTGAGAGATGTAGAAGCCTTCAGAGGTTGATGATGCTGTCTTGGTGAACCTATAGAGGTGGTGAAATCAGATATGATAGTTTGTTAGATTTGGGGAACATTATTATTGTGATTATTCTCTGTTGAAAACTATTTTCTGAAACTGCACTTGATGAATATCTGTGCCTCTGTGGAGGCCCTTCGAATTTATGCTATTAATTAATGGTGCTTGTGAATTGTGATGATATTGTTGCTTATTCTTCCTTGAAAAAAATGACAGGCNATGCTTGGTGGAAAAGTTGAAGTGCCGACTTTAGATGGCACAGCAGAAGTTAAGGTAACAAATTAGCATCCTCATATACTACTACTAAAGATTAGGCACTTCTGTCATAGTCACATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCTCTGCTCCACTTGCCGCCCTCTGCGCCGCTCGCCGTTGCTCCGTCCACCGCCTGCGGCCGTTTCGCCCATCCCCTTCTCCTTGCAGCGTAGGAGAGAGAGAGAGGAGGGATAGAGAGAAGAGGGAGGCTAACATGTGGGACCACATGGGCCCCACCTTTTTTTATTAGTTTTGTGAGTAGCTTACATATGGGTCCCATGGTTTTTATTATTTTTCCGGGATCCGATTGCCACATAAGCGCCACGTCACTGCCACATGGGACGAGGACCTAGTCAAAGGGAGCCATGTAGGTGCCATGTCATCTAAAACCAATGCTGCCGAGGGACCTCTTCTGCGCGGTTCAGTAAGTTGAGGGATGCGCTGTATCCGGTTTTTTAGACCGAGGATGAAAATCAGACTACGCGGCAAATTGAGAAACCTAAAGTGAACTTATTCCCTATTTTTAGCATCATCAGATGTACGGGCTGTTTGTGGCTCATATTTCTTGATTTAAGCATATGATAAATCGGGTGAACTCTGTCTGGCAGGGTGTTACATATTCCATTTCCCTGCTTTAAAAGAGCGCATTTTGTTTGTCATATCCAGTTAATTATAACCTTTGATTTGGTGGATAGTTTTTTTCTTGAACGCGCAAAAAGATTGCACGTCAATATATTAGAAGAATAGAATGTTTGTTATACGACGCAATCAGTCAGACCGACTTATGCCAAGAAAGGGGAGAAAAAAAAGACTAAAATAAAGAAGAGACGAAAGACTACTGTGACGCCTACACACAACTCCAAATAGCTGGGAGGGGGCAGAGCCACTACCTTCCCAGGAGAACCCCAAAATTAGCGATACCAGCTAAAGACCAAAGGTGGCCCTTAGAGAGGATGGACTCAAGGACCTCCGAGACCGATGACAATGCAGAGTCGAAAACTCTGGAGTTTCGCTCTTTCCACAGTTGTCAAGAGACTAGGAAGACCATAGAATCGAAACTGGCCCGGAGATGCCCCGGCAAGCAAACCCTAGAAGAAGGCCACCAATCTTGGAGACAGCTACCCCCGGGAGGAGAGAGGGCAGTCCAACCAAGAGGCGACAGCACACGGAGCCAAACTTACCGAGCGAACACGCAATCGAGGAGAATGTGGTTCGCTGTCTCAAGCGAACACGCAATGAGGATTTGGTGGATAGTAGCGATGGGACAAGGTATTTCCACACTAGAATAGTAGGAAACTTTCGATTTTTCAACCGTCGGATTTGTTTTGAGATGCATACTAGGGGGAAAAGAAAAAAATTCACGTAGAAATGGGGGCAAGGGGAATCAAACTCACAGCATGCTGCTTGCGACTGCGGAAGCTACTGCTAGGGGAAATGATTAACACTACCGCTAGGCCAGCTCACAGTTTAATCATATACTTCCTCATCCGGTACTTATATTATTATATTATAGGATAGAGGAAGTATTTATAATTTATATACAAGTTACACGGTAAGTAATTGCACTAATGATATTATCTAATGACACTATAGTTGCATTTGAAAGTTTTTCTCCTTAAAAAAATGTCAAATGTTATATAGCTACTCCTTTTCCACACACCACGACTTGATTGATATGGCTTGTTCAATTAATTTGTTGCCAAAACAAACTATACCAAAATTTGGTAATATAATTTTGTTAGTGCAACAAACTCAACAAGACTTTACCATTGTAACATTGTCAATTTGTACCAAAATTTAATAAATCCAATAATTTTTATTCACAAAACTATATCAAAATTTGGTAAGGTGTCAAAGCCAAACAACACCTCTACATCTTGACCTTGACAGAAATTTGGTAGTGCAAAATCTTGGCTTTACCAAAAAAATTTGAAAATGTTTATTTTGGCAATAAACTGAACATGCCCATATTGTTTTTTAATGTCACAACATTTGAAACCTAAATTCATCTAGCATGGTAGGCCTGATGCCAAATTAAGGATGACTTTTTTTCTCCCTTTTTTATGGTAGGCATTTGTACACCACAAATTCTTATGTGACAATTTGGTTTCATAGCTAATTTTCCTTAAGGTTATATTTTTGTTGACCAAATTTTTTTAACCTACTCATCGCAAAGTTAATCATGAATCAAGCATGTTTAGGTTAGGTTTAGGGAACACTAACCCTCTGTCATTTAAGGATCAGGCATACATTCTCACACCACTGGAGATGGATTAATCGGTACGGTTACCTTGCAAGCTACGCTGACTCCAACTACAGCTCATCCCCTTCTTCCCTCTCACAACTTTCCCTCACTTGTGACAATGGGGAGATAAAGGTCCAGCGGCAGTTGATGGTAGACGATTTTTCTTCCTTTAAGAATAGACACTTTGTAGATACAGTCTGGATGGAAGAGGTGTCTGTAGTGCAAAATTGCTACACCTTCACTCATATGCAATCTAGATGGAAGATATTCCTGTAGTGCAGAACTGCTACCTCATCTCTAGCGGTGCACTCAGGGATTCATCTGCTACACCTTCACTCAGTCTGGATGCACGCTTCGTGGATCACTCAGTCTGGATGCACGCTTCGTGGATGCGTGGGCCTGTTCACTTTGATGTCATTTTCAACCTTAACAAATTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021656

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021656&oldid=44181"