BGIOSGA021672

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Revision as of 13:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021672| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021672, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA021672

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021672, complete gene.

LocusTag

OSJNBB0024N18.8

Ensembl Transcript ID

BGIOSGA021672-TA

Ensembl Protein ID

BGIOSGA021672-PA

Length

4549

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6790210..6794758

Sequence Coding Region

6794422..6794758,6793790..6794342),complement(6791120..6791793,6790210..6790988

Genome Context

<gbrowseImage1> name=IndicaChromosome06:6790210..6794758 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:6790210..6794758 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGTACAAGATGGGGCGGTTCGAGCTCTTCCACCGTGTGGTGCTCGCGCCGCTGACGCGGTGCCGCTCCTACGGCCACGTGCCGCAGCCGCACGCGGCGGTGTACTACTCGCAGCGCGCCACCAACGGCGGCCTCCTCATCTCGGAGGCCACCGGCGTGTCCGCCACCGGGGAGGGCTACCCGGAGATCCCGGGCGTCTGGACGCGGCAGCAGGTCGAGGCGTGGAAACCCATCGTCGACGCCGTCCACCGCAAGGGCGCGCTCTTCTTCTGCCAGCTAGCGCACGTCGGCAGGGCCTCCACAAACGTTAACTATATACAGTATATTGCCGATTTCCAGCCGAATGGACAGGCGCCGATCTCAAGCACCGACAAGCAGATCACACCGGACGATTCACACATGGTGTACTCCAAGCCCCGGCGGCTGCGGACGGACGAGATCCCTCAGATCGTCGACGATTTCAGGGTGGCCGCGCAGAACGCCATCGAGGCGGGGTTCGACGGCGTGGAGATCCACGGCGCGCATGGCTACCTCATCGATCAATTCATGAAGGACAGCGCCAACGACTGGACCGACCAGTACGGTGGCAGCCTCGAGAACCGCTGCCGCTTCGCCGTCGAGGTGATCGACGCCGTCGTCGCCGAGGTGGGAGCTGACCGTGTTGGTGTCAGATTGTCGCCGTATATCGATTTTATGGACTGCTTCGACTCCGACCCGGAGGCTCTCGGCTCATACATGGTGCAGCGACTCAACAAGTACCCGGGGCTCCTCTACTGCCACATGGTGGAGCCGAGGATGGCCATCGTCGAAGGACGGAGGAAGATCACCCATGGCCTCCTGCCATTTCGGAAGCAATTCAATGGCACTTTCATTGCCTCCGGAGGAATGTTTAGAAAATTAGAACCACGCATTCCCGCACACGAGGAAAATCAGTGCGTTCTCCCGGGAAAGGAGAAACTTTCCTACCGACCAGACGATGACGGAGAGGGTGACGCAGGAAAGATCCGATCGAACAGCAATGCGCACATTTCCGTCAAGCCGCCAGGGTCCCACTCGGACGCTATAAGTGAAAGAGCATCATCAACCCTTGGACCATCGGACTCGGAGCAAAACACAATAGAGAAGCAGAGTGAGCTAGTAGCAGAGGCCACACTCACACACCAACCAAAGCTAACTAGCGTTGAGATGGCGCGCGAGGCGGAGAAGGACGCGGCGGCGGCGGCGGCGGCGGCGGAGATCTCGCTGCTGACGCCGTACAGGATGGGGCGGTTCGAGCTCTCCCACCGTGTGGTGCTCGCGCCGCTCACGCGGAACCGCTCCTACGGCAACGTGCCGCGGCCGCACGCGGTGCTGTACTACACGCAGCGCGCCACCAGCGGCGGCCTCCTCGTCACGGAGGCCACCGGCGTCTCCGCCACCGCGCAGGGCTACCCGGACACCCCCGGCATCTGGACGCAGCAGCAGGTCGAGGCGTGGAAGCCCATCGTCGACGCCGTCCACCGCAAGGGCGCCCTCTTCTTCTGCCAGCTCTGGCACGTCGGCAGGGTCTCCACCAACGAATACCAACCTGACGGGCAGGCGCCCATCTCAAGCACAGACAGGCAGATCACACCGGACGATTCAGGCATCGTCTACTCGAAACCCCGACGGCTGAGGACGGAGGAGATCCCTCAGATCATCGACGACTTCAGGCGAGCCGCGCGGAACGCCATCGAGGCCGGGTTCGACGGCGTGGAGATCCACGGCGCGCACGGCTACCTCCTGGAGCAGTTCATGAAGGACAGCGCCAACGACCGCAGCGACGAGTACGGTGGCAGCCTCGAGAACCGGTGCCGCTTCGTTGTCGAGGTGATCGACGCCATCGTCGCCGAGGTTGGAGCGCACCGTGTGGGGATCAGGCTGTCACCGTTCATCGACTACATGGACTGCGTCGACTCCGACCCGGTGGCTCTCGGCTCGTACATGGTGCAGCAGCTCAACAAGCACCCGGGGTTTCTCTACTGCCACATGGTGGAGCCAAGAATGGCCATCGTGGAAGGACGCAGGAAGATCACCCATGGCCTCCTGCCATTCCGGAAGCTGTTCAATGGCACTTTCATCGCTGCCGGAGGATATGATCGGGAGGAAGGAAACAAGGTGATAGCCGATGGATATGCTGACCTCGTCGCCTACGGGAGGCACTTCTTGGCCAATCCGGACTTGCCCAAGAGGTTCGCGATCAACGCACCATTGAACAAGTATAATAGGTCCACCTTTTACATACAGGATCCTGTTGTTGGCTACACGGACTATCCTTTCCTTGATGAGAAAGACGAGGGCGCTGCTACTTATGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MAPYKMGRFELFHRVVLAPLTRCRSYGHVPQPHAAVYYSQRATNGGLLISEATGVSATGEGYPEIPGVWTRQQVEAWKPIVDAVHRKGALFFCQLAHVGRASTNVNYIQYIADFQPNGQAPISSTDKQITPDDSHMVYSKPRRLRTDEIPQIVDDFRVAAQNAIEAGFDGVEIHGAHGYLIDQFMKDSANDWTDQYGGSLENRCRFAVEVIDAVVAEVGADRVGVRLSPYIDFMDCFDSDPEALGSYMVQRLNKYPGLLYCHMVEPRMAIVEGRRKITHGLLPFRKQFNGTFIASGGMFRKLEPRIPAHEENQCVLPGKEKLSYRPDDDGEGDAGKIRSNSNAHISVKPPGSHSDAISERASSTLGPSDSEQNTIEKQSELVAEATLTHQPKLTSVEMAREAEKDAAAAAAAAEISLLTPYRMGRFELSHRVVLAPLTRNRSYGNVPRPHAVLYYTQRATSGGLLVTEATGVSATAQGYPDTPGIWTQQQVEAWKPIVDAVHRKGALFFCQLWHVGRVSTNEYQPDGQAPISSTDRQITPDDSGIVYSKPRRLRTEEIPQIIDDFRRAARNAIEAGFDGVEIHGAHGYLLEQFMKDSANDRSDEYGGSLENRCRFVVEVIDAIVAEVGAHRVGIRLSPFIDYMDCVDSDPVALGSYMVQQLNKHPGFLYCHMVEPRMAIVEGRRKITHGLLPFRKLFNGTFIAAGGYDREEGNKVIADGYADLVAYGRHFLANPDLPKRFAINAPLNKYNRSTFYIQDPVVGYTDYPFLDEKDEGAATYA</aaseq>

Gene Sequence

<dnaseqindica>1..337#417..969#2966..3639#3771..4549#ATGGCGCCGTACAAGATGGGGCGGTTCGAGCTCTTCCACCGTGTGGTGCTCGCGCCGCTGACGCGGTGCCGCTCCTACGGCCACGTGCCGCAGCCGCACGCGGCGGTGTACTACTCGCAGCGCGCCACCAACGGCGGCCTCCTCATCTCGGAGGCCACCGGCGTGTCCGCCACCGGGGAGGGCTACCCGGAGATCCCGGGCGTCTGGACGCGGCAGCAGGTCGAGGCGTGGAAACCCATCGTCGACGCCGTCCACCGCAAGGGCGCGCTCTTCTTCTGCCAGCTAGCGCACGTCGGCAGGGCCTCCACAAACGTTAACTATATACAGTATATTGCCGGTGATTGATCGATCAACATAAGGTCTTTGCGAATTGTGCTTTGTTGATTGATTCGATTAATTGCGAGATGAACCAACAGATTTCCAGCCGAATGGACAGGCGCCGATCTCAAGCACCGACAAGCAGATCACACCGGACGATTCACACATGGTGTACTCCAAGCCCCGGCGGCTGCGGACGGACGAGATCCCTCAGATCGTCGACGATTTCAGGGTGGCCGCGCAGAACGCCATCGAGGCGGGGTTCGACGGCGTGGAGATCCACGGCGCGCATGGCTACCTCATCGATCAATTCATGAAGGACAGCGCCAACGACTGGACCGACCAGTACGGTGGCAGCCTCGAGAACCGCTGCCGCTTCGCCGTCGAGGTGATCGACGCCGTCGTCGCCGAGGTGGGAGCTGACCGTGTTGGTGTCAGATTGTCGCCGTATATCGATTTTATGGACTGCTTCGACTCCGACCCGGAGGCTCTCGGCTCATACATGGTGCAGCGACTCAACAAGTACCCGGGGCTCCTCTACTGCCACATGGTGGAGCCGAGGATGGCCATCGTCGAAGGACGGAGGAAGATCACCCATGGCCTCCTGCCATTTCGGAAGCAATTCAATGGCACTTTCATTGCCTCCGGAGGGTATGACCGGGAGGAAGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATGATAGATCTACATTTTACACACATAATTCCGTCGTGGCTACACGGATTACCCTTTCCTTGAGGAGAAGAAAGAGGACTCAGCTACGGTAATTGTTTGATTGTCACCTAAATCGCCGAGTTTAATTTTTTTTTCTGGATCAATAATGTGTGCTTGCCATGCGTAACACGCTTGAGTAGATTTTGATGCATACATGTTTATAATTTAACCAAGGTTATCTTTTATTAATGAGTATTTATTGTATTGATGCCGCCAAATATATGGATTACATGTGCCGTTGACTTATGTACTCATTATCATGATGTGACAAATCAGAAGATCTAGAAATGTGTAAATTAGATCTACCGATTGAGATCACCTTCATGGATCTACCTCCCCCGCCCTCCCTCGTTTCAAGTCACCCCCATCTCTTGTCTCCTCATATCTACCACGCACCTTGGTGCCATGCCTTCAAACCCTACTCTCCTTTGTCGGATCTATAATGCCCCACCCACCACATTATCTAGTAGTGGGGCTCCATTGCAATCTATCAGGAGAGCCTCTCCATGCTCACCGGCGAGGTTGACGACACTATGGTCGATGAGGGAGTCGCTATGTCATTGCCTACGGCGATTCTAGCGTGGGGTGAAGATCACGCCTGGCCCATATATCACCCTTGTCTGGGTGGTTTATGCAGTACTTCTCCCCCCTCCCTATTTCCCTCATTCCTTGCGAACCTTTGCTTGAGAAATGGTTCCTGTAGGGCACTTTGTGTGTCAAATTTGTTTGTGCACGAATCTTTACCGCGGTAGCTTGGCTGTTTCAGAAGATGTGTCATTTATCATGTCCTTGACGTACCACTAATCTATCTATATATGTTATAACTAGGAGATTTGCCCCAGTCAAGTTAAAAGTATCTCAAGGTACCAGTATTTTACGGTACCAAATTGTTTTCGATCGTTGAATCTAGCTGGACAGGATGGACATTGTTAAATCCAACAATCGAAAACGATTTGGTACGAAGAGATACCGGTACCTCGGGGTACTTTTTATTGGATCGGAGCAAATCTCTATAACTAGACATTGTGAAAAAGCTTCCATATTAACTCAAACGATGTGATCATTTATTAGTTGGGTTGTATTTCTATATATGGAGAACCTGTTAACCAAAACATTCAATTGTTTATCTTTTTGAAAAGGAAACATTCAATTGTTTATCACTATGAACTCTTTAAGTTTTAGTTCTTCTAATATATAATAACTCAAAAATTCAAATTGAATAAATATAAAGACGTACCTATCTTGAAATTTAATTCTAAAATTCGAATTCATAATTAGAAACTCATAGCTGGTGTGGACTCTACCTTTAGTATAACCTGCTACAATTAAAATTTTATTTATACTATCAATAATAATAGCCCGTGGGTTACTACTACTAGTAAAATTGTATTAGATGCAGTGTTGTACTCCCTCCACCCCATTTTAAGTGCAGCCATGTTTTTCCGTGCTAAACTTTGATCGTCCGTCTTATTTAATTTTTTTTCAAAAAATAAAAACATAAGTCACACATAAAGTACTATTCATGTTTTATCATCTCATAACAACAAAAATACTAATTATAAAAAAAATTCAAATAAGACGGACTATTAAAATTAGGCACGAAAACTTATGGTTGCACTTAAAATGGAATGGAGGGAGTATATTTTTATATACATGTTCTTAACGATCCAAAAGAAAAAAAAAGAGGTGAAAAATAAACTATCATGAAAAAAATATCTCAACATCATTAAGTATTAGCTATTTTTTCAAAAATGGATTGATTTGATTTTGTAAGCAACTTTCATATAAAAACTTTTTGTAAAAAACACATCATTTAGCCGTTTGAAAAGCGCGCGAGGAAAACAATGCACCGGTCTTCAGCACCGGACGGCTGTTGCATTAAAGAATGTTTAGAAAATTAGAACCACGCATTCCCGCACACGAGGAAAATCAGTGCGTTCTCCCGGGAAAGGAGAAACTTTCCTACCGACCAGACGATGACGGAGAGGGTGACGCAGGAAAGATCCGATCGAACAGCAATGCGCACATTTCCGTCAAGCCGCCAGGGTCCCACTCGGACGCTATAAGTGAAAGAGCATCATCAACCCTTGGACCATCGGACTCGGAGCAAAACACAATAGAGAAGCAGAGTGAGCTAGTAGCAGAGGCCACACTCACACACCAACCAAAGCTAACTAGCGTTGAGATGGCGCGCGAGGCGGAGAAGGACGCGGCGGCGGCGGCGGCGGCGGCGGAGATCTCGCTGCTGACGCCGTACAGGATGGGGCGGTTCGAGCTCTCCCACCGTGTGGTGCTCGCGCCGCTCACGCGGAACCGCTCCTACGGCAACGTGCCGCGGCCGCACGCGGTGCTGTACTACACGCAGCGCGCCACCAGCGGCGGCCTCCTCGTCACGGAGGCCACCGGCGTCTCCGCCACCGCGCAGGGCTACCCGGACACCCCCGGCATCTGGACGCAGCAGCAGGTCGAGGCGTGGAAGCCCATCGTCGACGCCGTCCACCGCAAGGGCGCCCTCTTCTTCTGCCAGCTCTGGCACGTCGGCAGGGTCTCCACCAACGGTATGTACTCCGACTTCACATATAGTTAAGTTGCTGGCAATTGATTCATAGGTTTTTGTTAAGTTTTTGGTTTCTTGCAAATTGTTCTCTTTGGCTGATTGAATTGCAAACCATGAATTAATTTCCAACAGAATACCAACCTGACGGGCAGGCGCCCATCTCAAGCACAGACAGGCAGATCACACCGGACGATTCAGGCATCGTCTACTCGAAACCCCGACGGCTGAGGACGGAGGAGATCCCTCAGATCATCGACGACTTCAGGCGAGCCGCGCGGAACGCCATCGAGGCCGGGTTCGACGGCGTGGAGATCCACGGCGCGCACGGCTACCTCCTGGAGCAGTTCATGAAGGACAGCGCCAACGACCGCAGCGACGAGTACGGTGGCAGCCTCGAGAACCGGTGCCGCTTCGTTGTCGAGGTGATCGACGCCATCGTCGCCGAGGTTGGAGCGCACCGTGTGGGGATCAGGCTGTCACCGTTCATCGACTACATGGACTGCGTCGACTCCGACCCGGTGGCTCTCGGCTCGTACATGGTGCAGCAGCTCAACAAGCACCCGGGGTTTCTCTACTGCCACATGGTGGAGCCAAGAATGGCCATCGTGGAAGGACGCAGGAAGATCACCCATGGCCTCCTGCCATTCCGGAAGCTGTTCAATGGCACTTTCATCGCTGCCGGAGGATATGATCGGGAGGAAGGAAACAAGGTGATAGCCGATGGATATGCTGACCTCGTCGCCTACGGGAGGCACTTCTTGGCCAATCCGGACTTGCCCAAGAGGTTCGCGATCAACGCACCATTGAACAAGTATAATAGGTCCACCTTTTACATACAGGATCCTGTTGTTGGCTACACGGACTATCCTTTCCTTGATGAGAAAGACGAGGGCGCTGCTACTTATGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021672