BGIOSGA021702

From RiceWiki
Revision as of 13:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021702| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021702, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021702

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021702, complete gene.

LocusTag

OSJNBB0015B15.25

Ensembl Transcript ID

BGIOSGA021702-TA

Ensembl Protein ID

BGIOSGA021702-PA

Length

2974

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6175972..6178945

Sequence Coding Region

6177729..6178945,6177512..6177635),complement(6176753..6177046,6176460..6176662),complement(6175972..6176248

Genome Context

<gbrowseImage1> name=IndicaChromosome06:6175972..6178945 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:6175972..6178945 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGCCGACGACGCCGTTGCCGGAGGCCGCAAAACCTCCCCAAAACCCCGAGAAGACGGCCGCCTCGAGCCCCCACGCGCCGTCCTCGCGCCCGCCGCTGCCTCCCGCCTCGGCCGCGCTCCTCCGCCGCCGCTCGTCGCTCACCAAGCCCAAGTCCCGCTTCGTCGAGCCCGCGGCCCCGCCCTCCTCCGCCGCCGCCGCCGCGGCCTCCTCCACTTCGTCGCACGCCTCCCCCGCGCACCCCGCCGCCGCCGCAGGGGGCGGCTCGGGGGCGGCTTCCACGCCGCACACCCCCGCGGAAGCCGACGACGAGGAGGAGGTGTTCCCCAAGGAGGTCCGGCGCAAGTCGTCGGCGCGCTGCCGCCGCAGGATGAAGCTGAGCGTGGAGCTCCTCGTGCTCGTCCTCTTCCTCGCGCTGCTCGTCGTCAGCCTCGTGGTGCGGCCGCTCAAGGGGGCTGGATTCTGGGGCCTGGAGATCTGGAAGTGGTGCGTCATGGTCATCTGCGTCTTCTCCGGCCACCTCGTCAGCCATTGGGTCGTCACGCTCGTCGTCTTCCTCGTCGAGCGCAACTTCCTCCTCCGCAACAAGGTGCTCTACTTCGTCTTCGGCCTCAAGAAGAGCGTCCAGGTCTGCCTCTGGATCGGGCTCGTGCTCATCGCCTGGTCGCAGCTCTTCGACCGCGACGTCGGGCGATCGGCCAAGACGGCCAGAATTCTCAATTATGTGTCCAGGTTTCTCGCCTCCGTGCTCATTGGATCAGTCATTTGGTTGGTCAAGACGTTCCTCATGAAGGTGGTGGCATCCACGTTCCACCGGAAGGCGTTCTTCGATCGGATTCTGGAGAATGTGTTCGATCAGTACGTCCTGCAGACGTTGTCGGGGCCGCCCGTGATGGAGCTGGCAGAAAATGTGGGCCGGGAGGGTAGTGGTCTTGGGCGGGTGAGCTTCACCAAACCGAAGGAGGAGAAAGGCTCGCCGGGTGTGATTGACGTGATGAAACTGAGGAAGATGAGCCAGGAGAAGGTGTCGGCGTGGACGATGAAAGGGTTGATGGCGGCAATCGGAAGCTCAAGGCTGTCAACGATATCTAATACGATCGAGAGCTTTGATGATGTTGATGGCATGGAGCAGAAGGATAAGGAGATAAATAATGAGTGGGAGGCAAAGGCAGCTGCATCTGCCATTTTCAAGAACGTCGCAAGACCCGGCTATAAGCACATTGAGGAGGTGGATCTGCTAAGATTTTTCAACAAGGAGGAGGTGGATTTGGTGCTTCAAAGGTTTGAGGGAGCATTTGAGACCAGGAAGATAAAAAAGTCTGCACTGAAGAACTGGGTGGTAAAGGCATATCTTGACCGCAAATCACTGGCACATTCTTTGAATGACACAAAAACAGCGGTTATGCAACTTCACAATCTGATCAGGGTTTTAGTGATTATTATAATCATTATCATCACTTTGTTGTTGATGGGCATTGCGACAACAAAAATCCTCCTTGTCATCTCGTCCCAACTTTTAGTTGTGGTATTCATATTTGGAAATGCCTGCAAGACTGTATTTGAGGCTCTTATATTTGTATTCATCATGCATCCATTTGATGTTGGCGACCGCTGTGTCATCGATGGAATACAGATGGTTGTCGAAGAAATGAATATATTAACCACTATTTTCTTGAAAAATGACAATGAGAAAGTATATTACCCGAACTCTGTATTATCAACAAAGGCAATCAGCAACTTTTATCGAAGTCCCAATATGTATGACACCATTAATTTTACGATTGATGTTTCAACTTCAATTGAGAGAATTGGAGCTTTGAAGTCCAGAATCAAGGGGTACATAGACAGCAAACCGACGCACTGGTGCCCTATTCACACCGTAAACTTAAAGGACATCTTGGACGTGAACAAGATCAACATGTCGCTGTGTGTCCAGCATACGATGAACTTCCAGAATATCCGAGAGAGGAACCTCAGGAGATCTGAGCTCGTCATGGAACTAAAGAAACTGTTTGAGGAGATGTCCATCACCTACCACCTTTTGCCCCAAAAGGTTGAGCTTAGCTTTGTCGGCCCAAATCCAATACCCATTGCTCTTCCACAAAGCAGATAA</cdnaseq>

Protein Sequence

<aaseq>MTPTTPLPEAAKPPQNPEKTAASSPHAPSSRPPLPPASAALLRRRSSLTKPKSRFVEPAAPPSSAAAAAASSTSSHASPAHPAAAAGGGSGAASTPHTPAEADDEEEVFPKEVRRKSSARCRRRMKLSVELLVLVLFLALLVVSLVVRPLKGAGFWGLEIWKWCVMVICVFSGHLVSHWVVTLVVFLVERNFLLRNKVLYFVFGLKKSVQVCLWIGLVLIAWSQLFDRDVGRSAKTARILNYVSRFLASVLIGSVIWLVKTFLMKVVASTFHRKAFFDRILENVFDQYVLQTLSGPPVMELAENVGREGSGLGRVSFTKPKEEKGSPGVIDVMKLRKMSQEKVSAWTMKGLMAAIGSSRLSTISNTIESFDDVDGMEQKDKEINNEWEAKAAASAIFKNVARPGYKHIEEVDLLRFFNKEEVDLVLQRFEGAFETRKIKKSALKNWVVKAYLDRKSLAHSLNDTKTAVMQLHNLIRVLVIIIIIIITLLLMGIATTKILLVISSQLLVVVFIFGNACKTVFEALIFVFIMHPFDVGDRCVIDGIQMVVEEMNILTTIFLKNDNEKVYYPNSVLSTKAISNFYRSPNMYDTINFTIDVSTSIERIGALKSRIKGYIDSKPTHWCPIHTVNLKDILDVNKINMSLCVQHTMNFQNIRERNLRRSELVMELKKLFEEMSITYHLLPQKVELSFVGPNPIPIALPQSR</aaseq>

Gene Sequence

<dnaseqindica>1..1217#1311..1434#1900..2193#2284..2486#2698..2974#ATGACGCCGACGACGCCGTTGCCGGAGGCCGCAAAACCTCCCCAAAACCCCGAGAAGACGGCCGCCTCGAGCCCCCACGCGCCGTCCTCGCGCCCGCCGCTGCCTCCCGCCTCGGCCGCGCTCCTCCGCCGCCGCTCGTCGCTCACCAAGCCCAAGTCCCGCTTCGTCGAGCCCGCGGCCCCGCCCTCCTCCGCCGCCGCCGCCGCGGCCTCCTCCACTTCGTCGCACGCCTCCCCCGCGCACCCCGCCGCCGCCGCAGGGGGCGGCTCGGGGGCGGCTTCCACGCCGCACACCCCCGCGGAAGCCGACGACGAGGAGGAGGTGTTCCCCAAGGAGGTCCGGCGCAAGTCGTCGGCGCGCTGCCGCCGCAGGATGAAGCTGAGCGTGGAGCTCCTCGTGCTCGTCCTCTTCCTCGCGCTGCTCGTCGTCAGCCTCGTGGTGCGGCCGCTCAAGGGGGCTGGATTCTGGGGCCTGGAGATCTGGAAGTGGTGCGTCATGGTCATCTGCGTCTTCTCCGGCCACCTCGTCAGCCATTGGGTCGTCACGCTCGTCGTCTTCCTCGTCGAGCGCAACTTCCTCCTCCGCAACAAGGTGCTCTACTTCGTCTTCGGCCTCAAGAAGAGCGTCCAGGTCTGCCTCTGGATCGGGCTCGTGCTCATCGCCTGGTCGCAGCTCTTCGACCGCGACGTCGGGCGATCGGCCAAGACGGCCAGAATTCTCAATTATGTGTCCAGGTTTCTCGCCTCCGTGCTCATTGGATCAGTCATTTGGTTGGTCAAGACGTTCCTCATGAAGGTGGTGGCATCCACGTTCCACCGGAAGGCGTTCTTCGATCGGATTCTGGAGAATGTGTTCGATCAGTACGTCCTGCAGACGTTGTCGGGGCCGCCCGTGATGGAGCTGGCAGAAAATGTGGGCCGGGAGGGTAGTGGTCTTGGGCGGGTGAGCTTCACCAAACCGAAGGAGGAGAAAGGCTCGCCGGGTGTGATTGACGTGATGAAACTGAGGAAGATGAGCCAGGAGAAGGTGTCGGCGTGGACGATGAAAGGGTTGATGGCGGCAATCGGAAGCTCAAGGCTGTCAACGATATCTAATACGATCGAGAGCTTTGATGATGTTGATGGCATGGAGCAGAAGGATAAGGAGATAAATAATGAGTGGGAGGCAAAGGCAGCTGCATCTGCCATTTTCAAGAACGTCGCAAGACCCGGCTATAAGTAAGAGGATTATAATAGTGAAGTAGTCCAATCGTTTGGATATTCCCAATCGTTTGGATATTCTTTAATTTGTGCAATTGTTTATTGGTGCAGGCACATTGAGGAGGTGGATCTGCTAAGATTTTTCAACAAGGAGGAGGTGGATTTGGTGCTTCAAAGGTTTGAGGGAGCATTTGAGACCAGGAAGATAAAAAAGTCTGCACTGAAGAACTGGGTGGTAATTGAAAGCTCTAACAGAAACATTGTTTCCATTTATGTTACATGCTCTATGTCCTAGTGGTCATTTTGTCCTAGGATATAGGTTTTCTCAAATGTTCCATATATTCGTTGAGTTTCATCCGCAGCAGTCAGAATTGTGAACATGCCCTTTTATAGTACTACTACATTAGAATTCTAAAATTTGAGCAACGCATTTAAGCTGTAAACATTACCTGGAGTTATACAATTTGGACATGGTGAATTTATTATTACTACCTTATTGTCTCCTTTTCAAGTTCTTTTTGAGCATGTAACAAGTAATAGTTTATTTTCTATAACTCAATTTAACTATGTGAAAATGGAAGTGATACATCCTAAGCCAATATAGGATGGCTGTGGATGGGCTTATGTGTTTGATATGCGTTGATGCTCCGTGTGTAGACTAGAATATTTGAAGCTCATCTATTTGTTTTCCTGCCACCAGGTAAAGGCATATCTTGACCGCAAATCACTGGCACATTCTTTGAATGACACAAAAACAGCGGTTATGCAACTTCACAATCTGATCAGGGTTTTAGTGATTATTATAATCATTATCATCACTTTGTTGTTGATGGGCATTGCGACAACAAAAATCCTCCTTGTCATCTCGTCCCAACTTTTAGTTGTGGTATTCATATTTGGAAATGCCTGCAAGACTGTATTTGAGGCTCTTATATTTGTATTCATCATGCATCCATTTGATGTTGGCGACCGCTGTGTCATCGATGGAATACAGGTAACTTTTAGACCACCCTATTACCAGTACCTGTTTCAATTGATTTTCATATGAAGTTCTGGTACTGACTTTTATCTATGCTGATGTTAGATGGTTGTCGAAGAAATGAATATATTAACCACTATTTTCTTGAAAAATGACAATGAGAAAGTATATTACCCGAACTCTGTATTATCAACAAAGGCAATCAGCAACTTTTATCGAAGTCCCAATATGTATGACACCATTAATTTTACGATTGATGTTTCAACTTCAATTGAGAGAATTGGAGCTTTGAAGTCCAGAATCAAGGGGTGAGTTCTTAAACTGTCTTGTTTTCATCTTGTTTAGAATATTTTTTAGGAAAAGGACGACTCCAATATCTCAACATTCCAATGTTAGAGGCATACCACATATCATATATATTGATATGAATCTTTATGTGATATATATAATACGAAAGTTATCTGAAGTTGATTACATGTTATCACGTCTCAGTTACCCCTAATTCCTTTTGACTTTCAGGTACATAGACAGCAAACCGACGCACTGGTGCCCTATTCACACCGTAAACTTAAAGGACATCTTGGACGTGAACAAGATCAACATGTCGCTGTGTGTCCAGCATACGATGAACTTCCAGAATATCCGAGAGAGGAACCTCAGGAGATCTGAGCTCGTCATGGAACTAAAGAAACTGTTTGAGGAGATGTCCATCACCTACCACCTTTTGCCCCAAAAGGTTGAGCTTAGCTTTGTCGGCCCAAATCCAATACCCATTGCTCTTCCACAAAGCAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021702

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021702&oldid=44227"