BGIOSGA021717

From RiceWiki
Revision as of 13:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021717| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021717, complete gene.| tag = OsI_220...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021717

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021717, complete gene.

LocusTag

OsI_22045

Ensembl Transcript ID

BGIOSGA021717-TA

Ensembl Protein ID

BGIOSGA021717-PA

Length

3531

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5842691..5846221

Sequence Coding Region

5845093..5846221,5844387..5844454),complement(5842691..5843227

Genome Context

<gbrowseImage1> name=IndicaChromosome06:5842691..5846221 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:5842691..5846221 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGTCTACGCTCGTTCTGGCCGCTTCGACGACGCGCGCCAGCTGCTTGACGCAATGCGTGACCAGGACATCGAGCCTGACCTCGTTAGCTTCAATACCCTTATCAATGCCAGGGCCAAGTCTGGGTGTTTGGCCGCTGGTGTCGCTCTTGAGCTCCTACATGAAGTCCGGCAAGCTGGGCTGAGACCGGATGCTATCACTTACAACACCCTCATCAGTGCTTGCTCACAAGGTTCTAATTTGGATGATGCAGTGGCGGTGTTTGAGGAGATGATAGCTTCAGAGTGTCGGCCAGATTTGTGGACGTACAATGCCATGGTCTCCGTGCATGGCCGGTGCGGGAAGGCACAGGAGGCTGAGCTGATGTTTAAGGAGCTGGTTGAGAAGGGTTTTCAGCCGGATGCAGTCACATACAACTCGCTCCTTTATGCTTTCGCGAAGGAAGGCGATGTGGAGAGGGTGGAGCGTGTGTGTGAGGAATTGGTTAAGGCTGGTTTCAGGAAGGATGGGATTACTTATAATACCATGATTCATATGTATGGAAAGATGGGCAGGCTTGACTTGGCGCTTGGGTTGTATGATGAGATGAGGGCTATAGGCTGCACTCCAGATGCTGTGACCTATACTGTTTTGGTTGATTCTTTAGGGAAGATGGATAGGATTTCTGAGGCAGGGAAGGTGCTGGAGGAGATGGCTGATGCAGGATTAAAGCCAACTTTGGTAACTTTCAGTGCTTTGATATGTGCATACGCCAAAAGTGGGAGGCAGGATGATGCGGAGCGTACATTTGATCGTATGGTTGAGTCAGGTGTCAAACCTGATCGTTTAGCCTATTTGGTTATGTTAGATGTTTTTGCAAGGTCTGATGAGACTAGAAAGCTGATGGTTCTGTACCGGGCTATGATCAAGGATGGATATAAGCCAGATGATGGTTTATATCAGGTCTTGCTTGCTGCACTCGCAAAGGGAAATGAACACGATGAGATTGAAGGAGTTATCCAAGACATGGAGGCCGTTTTTGAAATGAATCCACTAGTAATATCCAGTATACTCATCAAGGCTGAATGCATTTCTCAGGGTGCTAGTCTGTTAAAGAGGGCATGCCTCCAAGGATATGAGCCTGACGATGGCCCAGACAGGCAACTGGCTAGCAATATGAGTCTAGGTGTCATCTCAAAGAGTCAATCTGCTATAGATGCTTCACTGCAGGGTGCACCAGAATCCCCCAAATCTATTGTATTGGTCACAGGAGAGGGGGAATATAACATGGTATCCTTGCGTAAAACTATCAGGGCTTACCTTTTGGAAATGGGCTCCCCTTTCCTACCATGCAGAAGTCGGTCAGGTCGCTTTGTGGTGAAGGCTTACTCTCTTAAGATGTGGCTGAAAGACTCTCCTTTTTGCCTGGACCTTGAGTTGAAAGATGCTCCCGCTCTTCCTAAAACGAACTCAATGAAGCTTACTGAAGGATATTTCATGAGAGCCGGTCTTGTACCTGTATTTAAAGATATACATGAGCGACTTGGAGAAGTATGGCCAAAGAAGTTTTCCAGACTAGCTCTATTGTCAGAAGAAAGCAGGGATGAAGTTATTAAAGCTGATATAAAAGGAAGGAAAGAAAAATTGGAGAAAATGAAAAAACAGGGTCTTGCCATAGCAAAGAGATCTAAAAGAGGGCCTCGGAGAGGGAAATTTGTTAAACAACAAAGCACACAGGAGGTTCTGAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAECISQGASLLKRACLQGYEPDDGPDRQLASNMSLGVISKSQSAIDASLQGAPESPKSIVLVTGEGEYNMVSLRKTIRAYLLEMGSPFLPCRSRSGRFVVKAYSLKMWLKDSPFCLDLELKDAPALPKTNSMKLTEGYFMRAGLVPVFKDIHERLGEVWPKKFSRLALLSEESRDEVIKADIKGRKEKLEKMKKQGLAIAKRSKRGPRRGKFVKQQSTQEVLK</aaseq>

Gene Sequence

<dnaseqindica>1..1129#1768..1835#2995..3531#ATGGGCGTCTACGCTCGTTCTGGCCGCTTCGACGACGCGCGCCAGCTGCTTGACGCAATGCGTGACCAGGACATCGAGCCTGACCTCGTTAGCTTCAATACCCTTATCAATGCCAGGGCCAAGTCTGGGTGTTTGGCCGCTGGTGTCGCTCTTGAGCTCCTACATGAAGTCCGGCAAGCTGGGCTGAGACCGGATGCTATCACTTACAACACCCTCATCAGTGCTTGCTCACAAGGTTCTAATTTGGATGATGCAGTGGCGGTGTTTGAGGAGATGATAGCTTCAGAGTGTCGGCCAGATTTGTGGACGTACAATGCCATGGTCTCCGTGCATGGCCGGTGCGGGAAGGCACAGGAGGCTGAGCTGATGTTTAAGGAGCTGGTTGAGAAGGGTTTTCAGCCGGATGCAGTCACATACAACTCGCTCCTTTATGCTTTCGCGAAGGAAGGCGATGTGGAGAGGGTGGAGCGTGTGTGTGAGGAATTGGTTAAGGCTGGTTTCAGGAAGGATGGGATTACTTATAATACCATGATTCATATGTATGGAAAGATGGGCAGGCTTGACTTGGCGCTTGGGTTGTATGATGAGATGAGGGCTATAGGCTGCACTCCAGATGCTGTGACCTATACTGTTTTGGTTGATTCTTTAGGGAAGATGGATAGGATTTCTGAGGCAGGGAAGGTGCTGGAGGAGATGGCTGATGCAGGATTAAAGCCAACTTTGGTAACTTTCAGTGCTTTGATATGTGCATACGCCAAAAGTGGGAGGCAGGATGATGCGGAGCGTACATTTGATCGTATGGTTGAGTCAGGTGTCAAACCTGATCGTTTAGCCTATTTGGTTATGTTAGATGTTTTTGCAAGGTCTGATGAGACTAGAAAGCTGATGGTTCTGTACCGGGCTATGATCAAGGATGGATATAAGCCAGATGATGGTTTATATCAGGTCTTGCTTGCTGCACTCGCAAAGGGAAATGAACACGATGAGATTGAAGGAGTTATCCAAGACATGGAGGCCGTTTTTGAAATGAATCCACTAGTAATATCCAGTATACTCATCAAGGCTGAATGCATTTCTCAGGGTGCTAGTCTGTTAAAGAGGGCATGCCTCCAAGGATATGAGCCTGACGGTAAGAGCCTACTGTCCATTTTAGACGCATATGAAAAAATGGGTAAGCATGAAAAAGTCTCTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTACTGAGAGGACTTCGTCTCTGTTTACTGAGGTTGACAGCTTTCTAGAAAAACTTGGGACACTAGAAGATTCTGCTTCATTGAACTTTGTAAATGCACTGGAAGACCTGTTATGGGCATTTGAACGTCGAGCAACCGCTTCATGGATTTTCCAATTGGCTGTAAAAAGAAGCATATACCATCATAATATCTTTCGGTATTTGCAACAATCTCTAACTCCGAAGATTTTCATTTGAGGCTATGCTCTATTTTCAGATTCAGCATGCCAGATGCAGCATTTCCAGTTTACTTGACCATTATAGGTACCCACTAGCAGAGTTCCACTTTTGGTTCACATGCACACCTGTGCACACGAAGAAGCTGATAAATTACAGTGACTTCGTGAACAACATTAATTGCAAAATAAGTGAGCCAGAAAATCCAGCCATAAGATACATTGATGTTTTATTTTTATTTTTTTAATCTGGACATTCAAGAGCTATAAAACAAGTAGTTAGCTTATAACATGTTTGGCCCACAGATGGCCCAGACAGGCAACTGGCTAGCAATATGAGTCTAGGTGTCATCTCAAAGAGTCAATCTGCTATAGTATTCTTACATTGGTGTGTTCTTCAACACTAGGATAGCTGAAACGTTTGACTAACATGGTCTGGTCTTATTTTTTGCTTCGTTTTATTTGTATCTGTTGGAACAAATTGTCCCAACAACATGGCAGGGACCTTCCTCTTCGTGAGAGGAAGTCCTTGCTAGTGAACAGTAGAGGGGAGGAGAGCATGAGGGTGAGGATGACAGTCCATGGATGGAATGGATGGGGATGAGGACAATATCTGATGATTTTTTATGATACTTGGCCTTACCTTGATCTTTTAGGGGACTTTCCATTTCTTCACATGCCTTTGTTTATGAGTTGAAATTGCTTACGTAATTCTAGATGACTAGGTTTAATTTCCTTATGATTATGAGTATTGGTAAATCCAAAGCGGAACGATTGTTTCTACTGTATTGATTAATCATTTTCTTGGTGAATGGCTCAGAGTGGAAGAAAAAGATTGGGGAGCTGACTTACGCAAGTTGTCTGCTGGGGCTGCTCTTGTTGCTCTAACATTGTGGCTTGATCAGATGCAAGTAGGTCTTAAAAATAATATTAATTTTTATATGGTGTTGCATTAGTTGATTGAAAGAGACCAAATCAATGATTAAAAACTTGTTTTGAGTGGAGAAATAGTAAAGTTTGTTCACTAGCTTTACTTATAGTGTATTGTTTTTTTGCCATTGTCATGACTATGGACAGTACAGCACACACTTTTGAGTCAAATGAACTATAAATTAAGAAGAATGAAGTGACTACAGACAAGTAAAATGTGTGGAATGTAGGCTATTTATCTCAGTTGTAGTGTCTAATGCATTTCTACCTTTGTTTGACATTGTATGCAATTTTCACGTAGAGAATCGTGATAGGTTTTGTGACAGTAACATGATGAAGCATTGTCCTCCTTTTTTGCTAGTCTATCGGCTTGAAGCACAAATTAATTTTTGTCCATATCGAGGGCACAAATATTGTTGAATCTACCAATTGGCGGCAACCTGAATATTCCCCTAAAAAGCTTGAATGGTTGTATTGCGAATGAATTTAATACGTATCAAGTTTTCCTTTATAGCTAATATTTTGTTTGGATGGGCTTTTGTTTTGTTGATTTCTTAACTCTCCCTTTTTAAACATTACATCTGATATACTCTGCTTGTATAGGATGCTTCACTGCAGGGTGCACCAGAATCCCCCAAATCTATTGTATTGGTCACAGGAGAGGGGGAATATAACATGGTATCCTTGCGTAAAACTATCAGGGCTTACCTTTTGGAAATGGGCTCCCCTTTCCTACCATGCAGAAGTCGGTCAGGTCGCTTTGTGGTGAAGGCTTACTCTCTTAAGATGTGGCTGAAAGACTCTCCTTTTTGCCTGGACCTTGAGTTGAAAGATGCTCCCGCTCTTCCTAAAACGAACTCAATGAAGCTTACTGAAGGATATTTCATGAGAGCCGGTCTTGTACCTGTATTTAAAGATATACATGAGCGACTTGGAGAAGTATGGCCAAAGAAGTTTTCCAGACTAGCTCTATTGTCAGAAGAAAGCAGGGATGAAGTTATTAAAGCTGATATAAAAGGAAGGAAAGAAAAATTGGAGAAAATGAAAAAACAGGGTCTTGCCATAGCAAAGAGATCTAAAAGAGGGCCTCGGAGAGGGAAATTTGTTAAACAACAAAGCACACAGGAGGTTCTGAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021717