BGIOSGA021739

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Revision as of 13:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021739| Description = Sucrose synthase 2| Definition = Oryza sativa Indica Group BGIOSGA021739, complete gene.| tag = | tid = BGIOSGA02173...")
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Gene Name

BGIOSGA021739

Description

Sucrose synthase 2

Definition

Oryza sativa Indica Group BGIOSGA021739, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA021739-TA

Ensembl Protein ID

BGIOSGA021739-PA

Length

4367

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5374649..5379015

Sequence Coding Region

5378921..5379015,5378388..5378496),complement(5378147..5378298,5377871..5378063),complement(5377603..5377721
,5377291..5377507),complement(5377113..5377208,5376843..5377016),complement(5376641..5376757
,5376392..5376558),complement(5376079..5376303,5375421..5375739),complement(5375046..5375290
,5374796..5374934),complement(5374649..5374696

Genome Context

<gbrowseImage1> name=IndicaChromosome06:5374649..5379015 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:5374649..5379015 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCCAAGCTAGCTCGCCTCCACAGTCTCCGCGAACGCCTCGGTGCCACCTTCTCGTCTCATCCCAATGAGTTGATTGCACTCTTCTCTAGGGGAAAGGGAATGCTCCAGCGTCACCAGCTGCTTGCGGAGTTCGATGCCTTGATCGAAGCTGACAAAGAGAAATATGCTCCCTTTGAAGACATTCTCCGGGCTGCTCAGGAAGCCATTGTGCTGCCGCCCTGGGTTGCACTGGCCATCAGGCCAAGGCCTGGTGTCTGGGACTACATTCGGGTGAATGTAAGTGAGTTGGCAGTGGAAGAGCTGAGTGTTTCTGAGTACTTGGCATTCAAGGAACAGCTTGTTGATGGACACACCAACAGCAACTTTGTTCTTGAGCTTGATTTTGAGCCCTTCAATGCCTCCTTCCCGCGCCCGTCCATGTCCAAGTCCATCGGAAATGGGGTGCAGTTCCTTAACCGTCACCTGTCGTCCAAGTTGTTCCAGGACAAGGAGAGCCTCTACCCCTTGCTGAACTTCCTGAAAGCCCATAACCACAAGGGCACGACAATGATGCTGAATGACAGAATTCAGAGCCTTCGTGGGCTCCAATCATCCCTTAGAAAGGCAGAAGAATATCTGATGGGCATTCCTCAAGACACGCCCTACTCGGAGTTCAACCACAGGTTCCAAGAGCTCGGTTTGGAGAAGGGTTGGGGTGACTGCGCAAAGCGTGTGCTTGACACCATCCACTTGCTTCTTGACCTTCTTGAGGCCCCTGATCCGGCCAACTTGGAGAAGTTCCTTGGAACTATTCCAATGATGTTCAATGTTGTTATCCTGTCTCCGCATGGATACTTTGCCCAATCCAATGTGTTGGGATACCCTGATACTGGTGGTCAGGTTGTGTACATTTTGGACCAAGTCCGCGCTTTGGAGAATGAGATGCTTTTGAGGATCAAGCAGCAAGGCCTTGATATCACACCTAAGATCCTCATTGTAACCAGGCTGTTGCCTGATGCTGTTGGTACTACATGCGGCCAGCGTGTGGAGAAGGTTATTGGAACTGAGCACACTGACATTCTTCGTGTTCCATTCAGGAGTGAGAATGGTATCCTCCGCAAGTGGATCTCCCGTTTTGATGTCTGGCCATTCCTGGAAACATACACTGAGGATGTTGCAAACGAAATTATGAGGGAAATGCAAGCCAAACCTGATCTCATCATTGGCAATTACAGTGATGGAAACCTTGTCGCCACTCTGCTGGCTCACAAATTAGGAGTTACCCAGTGTACCATTGCTCATGCCTTGGAGAAAACCAAATACCCCAACTCAGACATATACTTGGACAAGTTTGACAGCCAGTACCACTTCTCATGCCAATTCACTGCTGATCTTATCGCCATGAATCACACTGATTTCATCATCACCAGTACATTCCAAGAAATTGCTGGAAGCAAGGACACTGTGGGGCAGTATGAATCACACATTGCATTCACCCTTCCTGGGCTTTACCGAGTTGTGCATGGCATAGATGTTTTTGATCCCAAGTTCAACATTGTCTCTCCTGGAGCTGACATGAGTGTCTACTTCCCGTACACCGAGGCTGACAAGAGGCTCACTGCCTTCCACCCTGAAATTGAGGAGCTTCTCTACAGTGAAGTCGAGAACGATGAACACAAGTTTGTATTGAAGGACAAGAACAAGCCAATCATCTTCTCCATGGCTCGTCTTGACCGAGTGAAGAACATGACAGGTCTGGTTGAGATGTATGGTAAGAATGCACATCTCAGGGATTTGGCAAACCTTGTGATTGTTTGTGGTGACCACGGCAATCAGTCCAAGGACAGGGAGGAGCAGGCTGAGTTCAAGAAGATGTACGGTCTCATTGACCAGTACAAGTTGAAGGGGCATATCCGCTGGATCTCAGCTCAGATGAACCGTGTTCGTAACGGGGAGTTGTACCGATACATTTGTGACACCAAGGGAGTCTTTGTCCAGCCTGCATTCTATGAAGCGTTTGGTCTGACTGTCATCGAAGCCATGACATGTGGTTTGCCAACAATCGCAACATGCCATGGTGGCCCTGCTGAGATTATTGTTGATGGGGTGTCTGGTCTGCACATTGATCCTTACCACAGTGACAAGGCTGCTGATATCTTGGTCAACTTCTTTGAGAAGTGCAAGCAGGATTCAACCTACTGGGACAATATTTCACAGGGAGGTCTGCAGAGGATTTACGAGAAGTACACCTGGAAGCTGTACTCTGAGAGGCTGATGACCTTGACTGGTGTATATGGATTCTGGAAGTACGTAAGCAACCTTGAGAGGCGCGAGACTCGCCGTTACATTGAGATGTTCTATGCTCTGAAATACCGCAGCCTGGCCAGCGCCGTCCCATTGGCTGTCGATGGAGAGAGCACATCCAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MAAKLARLHSLRERLGATFSSHPNELIALFSRGKGMLQRHQLLAEFDALIEADKEKYAPFEDILRAAQEAIVLPPWVALAIRPRPGVWDYIRVNVSELAVEELSVSEYLAFKEQLVDGHTNSNFVLELDFEPFNASFPRPSMSKSIGNGVQFLNRHLSSKLFQDKESLYPLLNFLKAHNHKGTTMMLNDRIQSLRGLQSSLRKAEEYLMGIPQDTPYSEFNHRFQELGLEKGWGDCAKRVLDTIHLLLDLLEAPDPANLEKFLGTIPMMFNVVILSPHGYFAQSNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPKILIVTRLLPDAVGTTCGQRVEKVIGTEHTDILRVPFRSENGILRKWISRFDVWPFLETYTEDVANEIMREMQAKPDLIIGNYSDGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHIAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSVYFPYTEADKRLTAFHPEIEELLYSEVENDEHKFVLKDKNKPIIFSMARLDRVKNMTGLVEMYGKNAHLRDLANLVIVCGDHGNQSKDREEQAEFKKMYGLIDQYKLKGHIRWISAQMNRVRNGELYRYICDTKGVFVQPAFYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFEKCKQDSTYWDNISQGGLQRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASAVPLAVDGESTSK</aaseq>

Gene Sequence

<dnaseqindica>1..95#520..628#718..869#953..1145#1295..1413#1509..1725#1808..1903#2000..2173#2259..2375#2458..2624#2713..2937#3277..3595#3726..3970#4082..4220#4320..4367#ATGGCTGCCAAGCTAGCTCGCCTCCACAGTCTCCGCGAACGCCTCGGTGCCACCTTCTCGTCTCATCCCAATGAGTTGATTGCACTCTTCTCTAGGTGAAGATCTCAATATAATATCTTGTGTCTTCTTGGAACCTGCTACTAATTGTTTTGAGTTTTCAATGATTTTATCCATACAGTTGGTTAGTTCTTAGTCAACCCAGATGTGAAACGATAACATGTTAGTATGTTACAAATTCTTAGCTGACAAGGTTATGCATCTCTTTAGTTTTAATGATGGTATCTATAATAATCTGTGATGAGCTCTAACATTTTTGTCTTGAGTCATGAATCTTAGATGATGTTGAAATATTGTTTGTTCATAGCTAGATTAAGTACAGATCATGTGGTCTTAAAAATAAGAAGTAAAAATCAGGTTTATGTGGTAGTGCCATTAACATAGTTCAGCCGCAGAAAGGATGTGAGATCTAAGCATTGGTTCTATTTCTTAAATATCACTCTATGCAGGTATGTTAACCAGGGGAAAGGGAATGCTCCAGCGTCACCAGCTGCTTGCGGAGTTCGATGCCTTGATCGAAGCTGACAAAGAGAAATATGCTCCCTTTGAAGACATTCTCCGGGCTGCTCAGGTAAATTTGGCAATGAGCCAGGATGGTTATGATAGTCAACTCAAAGTCAAATACCAGTCTTTCTAACTTACTTCCTTGACTGTATGTAGGAAGCCATTGTGCTGCCGCCCTGGGTTGCACTGGCCATCAGGCCAAGGCCTGGTGTCTGGGACTACATTCGGGTGAATGTAAGTGAGTTGGCAGTGGAAGAGCTGAGTGTTTCTGAGTACTTGGCATTCAAGGAACAGCTTGTTGATGGACAGTAAGTACCAGAACGACGATTTGCAGATTATAACTGAAGCAAAATAACAGTGACTGAATTTTACTTCTGTTTTTCTTAAACAGCACCAACAGCAACTTTGTTCTTGAGCTTGATTTTGAGCCCTTCAATGCCTCCTTCCCGCGCCCGTCCATGTCCAAGTCCATCGGAAATGGGGTGCAGTTCCTTAACCGTCACCTGTCGTCCAAGTTGTTCCAGGACAAGGAGAGCCTCTACCCCTTGCTGAACTTCCTGAAAGCCCATAACCACAAGGGCACGGTAAGCTTCCAATTTGTGGAACATACCAAATGCTTTTATACTAGATGTTTTTTCTTGTGTGAATTGCTTTAAATGTTAGTCCTTTAGAAACCCACTTGACATTCTCTGTAAGTTCCACCAAATGACGGGATCCGAATTTTCTATTACAGACAATGATGCTGAATGACAGAATTCAGAGCCTTCGTGGGCTCCAATCATCCCTTAGAAAGGCAGAAGAATATCTGATGGGCATTCCTCAAGACACGCCCTACTCGGAGTTCAACCACAGGTGATTACTTTATTATTTCTCCTTATCATATAGCCCATGTTATACTACTGCAAATGGAATAATTCCTTATAATGTGATTCATGATTTGAATACAGGTTCCAAGAGCTCGGTTTGGAGAAGGGTTGGGGTGACTGCGCAAAGCGTGTGCTTGACACCATCCACTTGCTTCTTGACCTTCTTGAGGCCCCTGATCCGGCCAACTTGGAGAAGTTCCTTGGAACTATTCCAATGATGTTCAATGTTGTTATCCTGTCTCCGCATGGATACTTTGCCCAATCCAATGTGTTGGGATACCCTGATACTGGTGGTCAGGTAGAGCTTTTTAACAAATTTTCCCCTTATATACAGTACTTCAAATATTTCTAGTTTTGACCTGTTATTCTGTTGTTTGCAGGTTGTGTACATTTTGGACCAAGTCCGCGCTTTGGAGAATGAGATGCTTTTGAGGATCAAGCAGCAAGGCCTTGATATCACACCTAAGATCCTCATTGTATGTTCAAGATGTTGGTCTTGAATGTTTCAAGTTTTAAACACTTCTCAGTGTGAATTGTAGAGTAACGTGCGGACATGATTTTACTTGATGCAGGTAACCAGGCTGTTGCCTGATGCTGTTGGTACTACATGCGGCCAGCGTGTGGAGAAGGTTATTGGAACTGAGCACACTGACATTCTTCGTGTTCCATTCAGGAGTGAGAATGGTATCCTCCGCAAGTGGATCTCCCGTTTTGATGTCTGGCCATTCCTGGAAACATACACTGAGGTAAATGGTTTATCTGACAACGTCCTTCAGAGCTGAGCACAAACCATGAATTCTGAGAGCTCATCTTTTTTTTTTTTGGTTGCAGGATGTTGCAAACGAAATTATGAGGGAAATGCAAGCCAAACCTGATCTCATCATTGGCAATTACAGTGATGGAAACCTTGTCGCCACTCTGCTGGCTCACAAATTAGGAGTTACCCAGGTATGTTTGGTTGTAAACCACTCCTTTAAATATTTCTTTCATTAAGTCAATTACTTATGATTTCTCTTCTACATGGATACAGTGTACCATTGCTCATGCCTTGGAGAAAACCAAATACCCCAACTCAGACATATACTTGGACAAGTTTGACAGCCAGTACCACTTCTCATGCCAATTCACTGCTGATCTTATCGCCATGAATCACACTGATTTCATCATCACCAGTACATTCCAAGAAATTGCTGGAAGGTAAAATTTTCTAAAGAGCAGTAGAATATTGCTGCGTTGTGCCAACACCTAAACGGGTATCTGATGTTTGTTTCCTCTGTTTCTTCAGCAAGGACACTGTGGGGCAGTATGAATCACACATTGCATTCACCCTTCCTGGGCTTTACCGAGTTGTGCATGGCATAGATGTTTTTGATCCCAAGTTCAACATTGTCTCTCCTGGAGCTGACATGAGTGTCTACTTCCCGTACACCGAGGCTGACAAGAGGCTCACTGCCTTCCACCCTGAAATTGAGGAGCTTCTCTACAGTGAAGTCGAGAACGATGAACACAAGTGAGTACTGAACTGCTGGTTCCGTCCCTGTTATTCACCTACCATGTAACAAATAATTAAACACTGATTTGTGTGTTTGGTCTAGCTTTGGCTCTTCAGTCTACTAAGTGCCATGCACTAGAACTTTGTAGATTTGAACTGCAATTCTTAATTTTCTCACTCCTTAGTAGACCACAATAATAATTATTGTGTCTGACCCAGCTAGTTTACAATAGTGACTTCAATGCTTGTTTTTTCCCCTTGAACAATTGTTTACTTTCTAGCAGTGGAGTTTGGCATCTAAACTTGAATACACGCTGTTCTTTTTTGTGTATAAAATGTTTGTTTAATGTTCTGCAGGTTTGTATTGAAGGACAAGAACAAGCCAATCATCTTCTCCATGGCTCGTCTTGACCGAGTGAAGAACATGACAGGTCTGGTTGAGATGTATGGTAAGAATGCACATCTCAGGGATTTGGCAAACCTTGTGATTGTTTGTGGTGACCACGGCAATCAGTCCAAGGACAGGGAGGAGCAGGCTGAGTTCAAGAAGATGTACGGTCTCATTGACCAGTACAAGTTGAAGGGGCATATCCGCTGGATCTCAGCTCAGATGAACCGTGTTCGTAACGGGGAGTTGTACCGATACATTTGTGACACCAAGGGAGTCTTTGTCCAGGTATATACATACGCTGTCATATTCTACTGCTATATTTCTATTCTGAGCTTCCAGTAGCAAATGATTTATACTATTTGTAAAGAACAGCCTTGTGCTTGAGACTAAAACTGCTTTTAAAATTGTTTTTTAGCCTGCATTCTATGAAGCGTTTGGTCTGACTGTCATCGAAGCCATGACATGTGGTTTGCCAACAATCGCAACATGCCATGGTGGCCCTGCTGAGATTATTGTTGATGGGGTGTCTGGTCTGCACATTGATCCTTACCACAGTGACAAGGCTGCTGATATCTTGGTCAACTTCTTTGAGAAGTGCAAGCAGGATTCAACCTACTGGGACAATATTTCACAGGGAGGTCTGCAGAGGATTTACGAGAAGTATGTATTTCATGATCTGCAAATATATAACATTTTTTTTTTACGATTGACATATAACTGTAGAAATCATGTGTCCAATCTATATTGATCCTACAAATTTGGACTTGTCAGGTACACCTGGAAGCTGTACTCTGAGAGGCTGATGACCTTGACTGGTGTATATGGATTCTGGAAGTACGTAAGCAACCTTGAGAGGCGCGAGACTCGCCGTTACATTGAGATGTTCTATGCTCTGAAATACCGCAGCCTGGTAAGTTACTCTCGCTGTTCAACAGCTTGTTAATTTCAGTATTATTGCACTGAGCATATCTCTGAATTTTCTGTTGCTACATTTCTTTGTTGAATCCAGGCCAGCGCCGTCCCATTGGCTGTCGATGGAGAGAGCACATCCAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021739

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021739&oldid=44264"