BGIOSGA021763

From RiceWiki
Revision as of 13:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021763| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021763, complete gene.| tag = P0470C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021763

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021763, complete gene.

LocusTag

P0470C02.7

Ensembl Transcript ID

BGIOSGA021763-TA

Ensembl Protein ID

BGIOSGA021763-PA

Length

3717

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4977827..4981543

Sequence Coding Region

4981507..4981543,4980529..4981068),complement(4979306..4979565,4978971..4979087),complement(4978713..4978883
,4977827..4978507

Genome Context

<gbrowseImage1> name=IndicaChromosome06:4977827..4981543 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:4977827..4981543 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCCATCTGTCAGAAGCTGTGATATTGCATAGGGATGCACCTACCTCGCAGCTCCGAGCTTTGGATTCAAGAAACCCAAATCTGGTGCTGGAATCCGAGCTCCAGATTCAAGCCGGAGCAATTCGGGTAAAACCAGGCGAGAAATCTTTGCGCAAGAAGATGTCGCCGGCCACCGCCGCCGCCGCCGACCTCCCCGCCGAGGAGGAGGGGAAGGGGGGGAGGAGCAGCAGCAGGCAAGAGGAGGCCAATGTCCTCCTCGCCGTCGATGCGGCGGCGGAGGGCGGCGGCGCGTGGTCACCGGTGGGGTGGTTCAGGATGCTGGGGAGGGAGCTACACTGGAGCTTCGTGGCGGCGGTGGTGGCGACGTACGGCGTCAGCCAGGGCCTCGGCGGCGGCATCATGCGGGTGGCGTCGGACTACTACTGGAAGGACGTGCAGCGGGTGCAGCCGTCGGCGGCGCAGGTGTACCAGGGGGTGACCTCCATCCCGTGGATGGTCAAGCCGCTCTGGGGCCTCCTCACCGACGTCCTCCCCATCGCCGGCTACCGCCGCCGCCCCTACTTCGTCATCGCAGGCTTCATGGGAGTAGTCGCGATGCTTGTATTATCTCTCCACAGCAAGCTTCATGTATTGTTCGCATTGTTGGCATTGATGGCCGGAAGTGCCAGTGTGGCAATAGCTGATGTAACTATAGATGCCTGTGTTGCTGAAAACAGTATAGTGCACCCTCATCTTGCTGCTGACATGATAAGCTTAAACGGATTCTGTGCATCTGTGGGAGGGCTTATTGGATTCTCAATAAGTGGTTTCCTTGTCCATGCAATAGGCTCTCAAATTAATCTTGTGTTTCTCAAGGGTGCCCTTGGCATGTTGGCAATACCTTCTGCCCTGGTAATCCTAGCTGGAATGATGATAAAGGACGTCCATATGCCCAACTTTCCATATGAGCTGGCCCATATGAAGTTTGTAGAGGCAAGTAGAACAATGATGGCAACCCTAAAATGTCCTGAAGTATGGCGACCATGTGTTTACATGTACATGTCTCTCGCTTTGAGCGTGGATATTCAAGAAGGAATGTTCTATTGGTACACAGATCAAAATGCAGGGCTATCTTTTTCAGAGGGATTCATTGGGTTTATCTTCGCAGTTGGGTCAGTTGGTTCTCTTATTGGGGTCATACTTTACCAAAATATTCTGAAGGACCATTCTTTTCGCAGCGTTCTCTGTTTAAGTCAGTTGTTGCTGAGCTTGTCAGGAATGCTTGACCTGATCTTGGTACTTCGTCTCAACCTAAAACTTGGGATACCTGACTACTACTTTGCTGTGATCGACGAGGGTGTCTCCAAAATGATCAACCGCATAAAATGGATGCCTCTTTTGGTACTTAGCTCAAAGCTTTGCCCTGCTGGCATTGAGGGCACATTCTATGCGTTGCTCATGTCCATCGACAATGTTGGCTTGCTATCTGGATCTTGGGCAGGTGGATTGATCCTTCATGTGTTGAACATCACAAGAACAGAGTTCAAAAACCTCTGGGCCGCGATCCTAATCCGAAATGCAATGAGGTTACTACCTTTGGCCCTGTTGTTTTTGGTGCCGAGAAGTGACCAGAACTCTAATCTCCTTCCAGCTGACTTGCTACCTGAGGATGATGGTGCCCAATATCAAGTGGACAATGTTGAGTTAACCTCTCTTACAGTGGATGGGAAATCGAGCACCGGTAGTTTGCACCAAGAATTCAAAAATCAGGACGTTGTCGAAAACGACGATGACGAGGCTTCACTGCTTGCCAACAGTAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MSHLSEAVILHRDAPTSQLRALDSRNPNLVLESELQIQAGAIRVKPGEKSLRKKMSPATAAAADLPAEEEGKGGRSSSRQEEANVLLAVDAAAEGGGAWSPVGWFRMLGRELHWSFVAAVVATYGVSQGLGGGIMRVASDYYWKDVQRVQPSAAQVYQGVTSIPWMVKPLWGLLTDVLPIAGYRRRPYFVIAGFMGVVAMLVLSLHSKLHVLFALLALMAGSASVAIADVTIDACVAENSIVHPHLAADMISLNGFCASVGGLIGFSISGFLVHAIGSQINLVFLKGALGMLAIPSALVILAGMMIKDVHMPNFPYELAHMKFVEASRTMMATLKCPEVWRPCVYMYMSLALSVDIQEGMFYWYTDQNAGLSFSEGFIGFIFAVGSVGSLIGVILYQNILKDHSFRSVLCLSQLLLSLSGMLDLILVLRLNLKLGIPDYYFAVIDEGVSKMINRIKWMPLLVLSSKLCPAGIEGTFYALLMSIDNVGLLSGSWAGGLILHVLNITRTEFKNLWAAILIRNAMRLLPLALLFLVPRSDQNSNLLPADLLPEDDGAQYQVDNVELTSLTVDGKSSTGSLHQEFKNQDVVENDDDEASLLANSS</aaseq>

Gene Sequence

<dnaseqindica>1..37#476..1015#1979..2238#2457..2573#2661..2831#3037..3717#ATGTCCCATCTGTCAGAAGCTGTGATATTGCATAGGGGTAGGTTTCAGTTAGCGAGCGCGCAGAATTACAGTTAAAATTTTAGTAAGACACAAAAATAAGAGGTCAAACGGCTATCCTCTACTCTACTACACCTGCACCCCAACCAGAAGGGATCTCCCAATTTCTTTGGACTTCCTCACTTCTAGCGTGCAAATTTAATAACTCTTCGGCTCCTCTTCTTGCCTCCGTTTTCTTTCTTGTTTTCAGGCACCAAATCTCTGCTGTTTATATACTCGAGTGGTGTTTTTGGATGCAATTAGGCAGCATTCTGCTGCAAATTTAGCATATATTTTTTTCTGTTCTGTCTGTGTGGAGTAGTAAGCTTGTGAAAGGAGCTGAGGGGTTGAAGATGCACTTGGATTTGATGTTCTTGCCAAGACCCCGACATTTTCTCTTGATTCTTTAAGACTTTTTTTGGGATCGATTCGATTACAGATGCACCTACCTCGCAGCTCCGAGCTTTGGATTCAAGAAACCCAAATCTGGTGCTGGAATCCGAGCTCCAGATTCAAGCCGGAGCAATTCGGGTAAAACCAGGCGAGAAATCTTTGCGCAAGAAGATGTCGCCGGCCACCGCCGCCGCCGCCGACCTCCCCGCCGAGGAGGAGGGGAAGGGGGGGAGGAGCAGCAGCAGGCAAGAGGAGGCCAATGTCCTCCTCGCCGTCGATGCGGCGGCGGAGGGCGGCGGCGCGTGGTCACCGGTGGGGTGGTTCAGGATGCTGGGGAGGGAGCTACACTGGAGCTTCGTGGCGGCGGTGGTGGCGACGTACGGCGTCAGCCAGGGCCTCGGCGGCGGCATCATGCGGGTGGCGTCGGACTACTACTGGAAGGACGTGCAGCGGGTGCAGCCGTCGGCGGCGCAGGTGTACCAGGGGGTGACCTCCATCCCGTGGATGGTCAAGCCGCTCTGGGGCCTCCTCACCGACGTCCTCCCCATCGCCGGCTACCGCCGCCGCCCCTACTTCGTCATCGCAGGTGGTAACACTTCACGCTTCCCATTTTTTTGCTGCTGATGATGATTACAATGGAAAACTGCTGGTTAATCATGAATCGCTAACTGAAATTTTTGGACCTGGGAGTAGTGATGTCTGATGATTAGATGCTGAAAATGTAGCAAGGAAGCGTATCGAGTTTCGATGTGCTCCTTGGGACACTATCTCTTTCATTATTAGGCTTTAGCTGAGGAGTATTAATTATTTAGGCCGAAGTTCATAGACCAGTTTTCCATTGAGTTACGAAGTATATTTTGGATCATTGATTTTGAACTACATAAAAGGGTTGAAGGAGCAAATTTTGTCCATTACCTAATTTGGATGAATCAATGCAGTTATGTAGGTGCATTACTATAAACAACCTTGCTGTCTAACTCAAATATATCAGCTGTTGCCGTTGCACAGTAGCATTAGTACCTACTCCCTCCGTCCCAAAAAAAGACAAACCCTGGGTTTCCGTGTCCAACGTTTGACTGTCCGTCTTATATGATTTCATTATATAATTAGTATTTTCATTGTTCATTAGATGATGTAACATGAATGATACATGATGAGTGACTTGTCTTTTTAGTTTTTTTCATAATTTTATCATATAAGACGGACGGTCAAACGTTGGACACGGAAACCCAGGGTTTGTCTTGTTTTGGGACGGAGGGAGTATGTCATAAAAGTTCCCTGATCGATGGGTCGAGGAATGGGATCGAGGAACACGGGGCGCTACATTTTTTATGTTTTAACATGGGGGGAAACGAGGTTATTCCCGTGTTCCCATAACAGGAACGGCATTCCCGGGACTTATTTAGTACTGAGAAGTCTGATGATATGTTCTTTTCTACTGTTATTTCCTCAACATAATGTTCCTTTGATTAAGTGCGACTGTTATTCAGTTACAGGTTATGGAATTATTTTTATTGATTATGCCTCCCTGTTTGCTGAGGAATTGCAGGCTTCATGGGAGTAGTCGCGATGCTTGTATTATCTCTCCACAGCAAGCTTCATGTATTGTTCGCATTGTTGGCATTGATGGCCGGAAGTGCCAGTGTGGCAATAGCTGATGTAACTATAGATGCCTGTGTTGCTGAAAACAGTATAGTGCACCCTCATCTTGCTGCTGACATGATAAGCTTAAACGGATTCTGTGCATCTGTGGGAGGGCTTATTGGATTCTCAATAAGTGGTTTCCTTGTCCATGCAATAGGCTCTCAAGTGAGTATCGTTGGTTTGACTTGTTTGTTAGTACTTTGTACTTCTAATTGATAATCACAATGGTTAGACCACTTTACTATAGTCCTGTCAATCAATTTAAATTTAAATTATTCTCCACTGATAGATCCGTTTCTGCATAAATATAAGTGAAGTGGTGATGGTGGTGCTTCTCTCTTTTATCCACTGCTGCTTTTTCTTGTGACGGTTTCTCATCATAGATTAATCTTGTGTTTCTCAAGGGTGCCCTTGGCATGTTGGCAATACCTTCTGCCCTGGTAATCCTAGCTGGAATGATGATAAAGGACGTCCATATGCCCAACTTTCCATATGAGCTGGTAAACAATTTTCCTTTTTCATGTCAGATATAAGTACTATTTTGATTTCCTGGATTCACATTTTCCTGTCTACTGTTAAAAAATTAGGCCCATATGAAGTTTGTAGAGGCAAGTAGAACAATGATGGCAACCCTAAAATGTCCTGAAGTATGGCGACCATGTGTTTACATGTACATGTCTCTCGCTTTGAGCGTGGATATTCAAGAAGGAATGTTCTATTGGTACACAGATCAAAATGCAGGGCTATCTTTTTCAGAGGTATATTATAATTTACAAATCTTATGCTATGCTCTGTGGTTTTCATGGCCTACATGGGAATAAAGCTTGCCTATAGCTTAATTCTTTTGTACGAAATCTTATCAGAAAAGATATTGCTTTGATGATAATGTTAGCTTCACTATCTCTAGTTAGTTTCCCTCGTTGGTGCAGCATGACCAAATCACTTTTTTTTTTTTACTGCCAGGGATTCATTGGGTTTATCTTCGCAGTTGGGTCAGTTGGTTCTCTTATTGGGGTCATACTTTACCAAAATATTCTGAAGGACCATTCTTTTCGCAGCGTTCTCTGTTTAAGTCAGTTGTTGCTGAGCTTGTCAGGAATGCTTGACCTGATCTTGGTACTTCGTCTCAACCTAAAACTTGGGATACCTGACTACTACTTTGCTGTGATCGACGAGGGTGTCTCCAAAATGATCAACCGCATAAAATGGATGCCTCTTTTGGTACTTAGCTCAAAGCTTTGCCCTGCTGGCATTGAGGGCACATTCTATGCGTTGCTCATGTCCATCGACAATGTTGGCTTGCTATCTGGATCTTGGGCAGGTGGATTGATCCTTCATGTGTTGAACATCACAAGAACAGAGTTCAAAAACCTCTGGGCCGCGATCCTAATCCGAAATGCAATGAGGTTACTACCTTTGGCCCTGTTGTTTTTGGTGCCGAGAAGTGACCAGAACTCTAATCTCCTTCCAGCTGACTTGCTACCTGAGGATGATGGTGCCCAATATCAAGTGGACAATGTTGAGTTAACCTCTCTTACAGTGGATGGGAAATCGAGCACCGGTAGTTTGCACCAAGAATTCAAAAATCAGGACGTTGTCGAAAACGACGATGACGAGGCTTCACTGCTTGCCAACAGTAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021763