Os11g0587100

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Revision as of 09:15, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0587100| Description = Protein prenyltransferase domain containing protein| Version = NM_001074703.2 GI:297612085 GeneID:4350803| Length = ...")
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Gene Name

Os11g0587100

Description

Protein prenyltransferase domain containing protein

Version

NM_001074703.2 GI:297612085 GeneID:4350803

Length

7390 bp

Definition

Oryza sativa Japonica Group Os11g0587100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:24066193..24073582

Sequence Coding Region

24071391..24073424

Expression

GEO Profiles:Os11g0587100

Genome Context

<gbrowseImage1> name=NC_008404:24066193..24073582 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:24066193..24073582 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccgccgcgggataccggtaccaggcgctcaaggaagccctagccgccgccatctccggccacgacctcgcccgccaccacgccgccgccgaccaccgcaggccgcacgcgctcgccgtcgtagcagggctcgcctccaacggctacgtcgcgtccctcctcgtctcccgctacttccgcctcggggacgccggcgccgcccgcaatgtgttcgacgccgcggcgacggcggcggcgccgcagaaggcgctcctctacaatgccatgctccgcgggtacctcgcgggtggcctcccgcggatggcggtggggatcttcggggagatggcggcggcggcgtgccttcccgaccgccacacgtaccacctcgccgtggcggcgtgcgcgcgggcgtcggagttcgaggtcggctggcgtatcggggcggaggccgctgcgaaagggttcgcgtccgacctcctcgtcgcgacggcgctgatcgggatgtatgctgaagctggggatatgggcgccgctcgtaaggtgttcgatggaatgccacagcgggatgctgtggcgtggaatgcggtgattgctggctatgcacgtggaggacatctgcgcgaggtcgtcgagctgtttatgaggatgaggtctgtggatgttgtgctcccgactgaggcgacactggtgaccctagtttctggttatgcaggttttggttcctgggagggccgtggtatgatgcacaccattgtaatcaagcttggcttccagcttaatctctttgtttccaatgctctccttgatctgtatgtcgagtttggctgtttgagagaggctgtgatgttgtttcgtcagatggcggtgaaagattctgtcacttggagtgcaatgattggtgggcttgttcggaatggaagaccggattccgctcttaagctattccgttggatggtgacaaactcgacagttttggtcactaggtctattttgctcaatgtgattatggcctgcgctgagttgggggagtggagagaaggaaaatgggttgaagagaactatgtgtgctgcaatggttttgaattcaagagagatccatctgtggtaacagcgttaatatacatgtatgcaaagtgcggaatgttagattcatcagtcagtcttctatatggggttgcagaagttagagatgatgtatttgcatggaacgctatgatcaaagggtgtggagagcttggactagtggaaaaggcagttggatttgtagtagaaatgcagaagataggcgttgatccagatgctattacatacttggagatcctacctatgatctcatcaattccatcactgaaaacagggatggaagcacacgctcagattgtcagaagaggtttcctgaatgaaagggcaattgctaactcacttgttagcatgtatggtcgatgcgggagccttaggcattcaattgaagtctttagcaggattgtggtcaaggatgtaatctcttggacgtctatgatgcaggtatatgcgtggaatggacatgttaatgaagttgttaaactttatgaggtgatgaagaaaacagaaacagaaccaaaccactacacttttcttgctgtactatctgcatgtaaaaacacaggtcttgttgaggaaggaatggaattgatcaagtacatgcaagagaagtgtggcctaaaaccagaaattgagcatatttcttgtgttgttgatatgctctgccgtgcaggacgtttgactgatgcataccaccttattaaatataataattctgaacacattaacaatacaatattgtgggggacgctgctaagcgcttcccgttcatgtggagatttggtgatcggagaagcagcagccaaacatctcttatctcttgatccagaaaatagggccaactctaagatgcttgctgatatttatgtcttgcttgggagaagggatgacgctgacaatctcctaagagtatcgatgacaagaggattggacataaaaccaggctgcagctggatggaaggtgtctaa</cdnaseq>

Protein Sequence

<aaseq>MSAAGYRYQALKEALAAAISGHDLARHHAAADHRRPHALAVVAG LASNGYVASLLVSRYFRLGDAGAARNVFDAAATAAAPQKALLYNAMLRGYLAGGLPRM AVGIFGEMAAAACLPDRHTYHLAVAACARASEFEVGWRIGAEAAAKGFASDLLVATAL IGMYAEAGDMGAARKVFDGMPQRDAVAWNAVIAGYARGGHLREVVELFMRMRSVDVVL PTEATLVTLVSGYAGFGSWEGRGMMHTIVIKLGFQLNLFVSNALLDLYVEFGCLREAV MLFRQMAVKDSVTWSAMIGGLVRNGRPDSALKLFRWMVTNSTVLVTRSILLNVIMACA ELGEWREGKWVEENYVCCNGFEFKRDPSVVTALIYMYAKCGMLDSSVSLLYGVAEVRD DVFAWNAMIKGCGELGLVEKAVGFVVEMQKIGVDPDAITYLEILPMISSIPSLKTGME AHAQIVRRGFLNERAIANSLVSMYGRCGSLRHSIEVFSRIVVKDVISWTSMMQVYAWN GHVNEVVKLYEVMKKTETEPNHYTFLAVLSACKNTGLVEEGMELIKYMQEKCGLKPEI EHISCVVDMLCRAGRLTDAYHLIKYNNSEHINNTILWGTLLSASRSCGDLVIGEAAAK HLLSLDPENRANSKMLADIYVLLGRRDDADNLLRVSMTRGLDIKPGCSWMEGV</aaseq>

Gene Sequence

<dnaseqindica>159..2192#gtcggcccagtatcgtccctttcctcccacctccgcgccgcccagtgcctcgccgccctcgccgcgagaacccccaccaccgccgctccgctcgccggcgagctgccggggaactccggcgaggaggaggaggacgaggggtagcggagacgacgtggatgtccgccgcgggataccggtaccaggcgctcaaggaagccctagccgccgccatctccggccacgacctcgcccgccaccacgccgccgccgaccaccgcaggccgcacgcgctcgccgtcgtagcagggctcgcctccaacggctacgtcgcgtccctcctcgtctcccgctacttccgcctcggggacgccggcgccgcccgcaatgtgttcgacgccgcggcgacggcggcggcgccgcagaaggcgctcctctacaatgccatgctccgcgggtacctcgcgggtggcctcccgcggatggcggtggggatcttcggggagatggcggcggcggcgtgccttcccgaccgccacacgtaccacctcgccgtggcggcgtgcgcgcgggcgtcggagttcgaggtcggctggcgtatcggggcggaggccgctgcgaaagggttcgcgtccgacctcctcgtcgcgacggcgctgatcgggatgtatgctgaagctggggatatgggcgccgctcgtaaggtgttcgatggaatgccacagcgggatgctgtggcgtggaatgcggtgattgctggctatgcacgtggaggacatctgcgcgaggtcgtcgagctgtttatgaggatgaggtctgtggatgttgtgctcccgactgaggcgacactggtgaccctagtttctggttatgcaggttttggttcctgggagggccgtggtatgatgcacaccattgtaatcaagcttggcttccagcttaatctctttgtttccaatgctctccttgatctgtatgtcgagtttggctgtttgagagaggctgtgatgttgtttcgtcagatggcggtgaaagattctgtcacttggagtgcaatgattggtgggcttgttcggaatggaagaccggattccgctcttaagctattccgttggatggtgacaaactcgacagttttggtcactaggtctattttgctcaatgtgattatggcctgcgctgagttgggggagtggagagaaggaaaatgggttgaagagaactatgtgtgctgcaatggttttgaattcaagagagatccatctgtggtaacagcgttaatatacatgtatgcaaagtgcggaatgttagattcatcagtcagtcttctatatggggttgcagaagttagagatgatgtatttgcatggaacgctatgatcaaagggtgtggagagcttggactagtggaaaaggcagttggatttgtagtagaaatgcagaagataggcgttgatccagatgctattacatacttggagatcctacctatgatctcatcaattccatcactgaaaacagggatggaagcacacgctcagattgtcagaagaggtttcctgaatgaaagggcaattgctaactcacttgttagcatgtatggtcgatgcgggagccttaggcattcaattgaagtctttagcaggattgtggtcaaggatgtaatctcttggacgtctatgatgcaggtatatgcgtggaatggacatgttaatgaagttgttaaactttatgaggtgatgaagaaaacagaaacagaaccaaaccactacacttttcttgctgtactatctgcatgtaaaaacacaggtcttgttgaggaaggaatggaattgatcaagtacatgcaagagaagtgtggcctaaaaccagaaattgagcatatttcttgtgttgttgatatgctctgccgtgcaggacgtttgactgatgcataccaccttattaaatataataattctgaacacattaacaatacaatattgtgggggacgctgctaagcgcttcccgttcatgtggagatttggtgatcggagaagcagcagccaaacatctcttatctcttgatccagaaaatagggccaactctaagatgcttgctgatatttatgtcttgcttgggagaagggatgacgctgacaatctcctaagagtatcgatgacaagaggattggacataaaaccaggctgcagctggatggaaggtgtctaactgtctaaagcttgcaaattgcaatacatgtagaaggtataattaaatatgattaagccactttatttctcaattttatgcatggtttgatattattctcttagatgttttgcatttctgtaatttacttttgtttctttgagaaatctgtaatgttgcaaaaaaagaattgatgtgggaaaagttgggggctttcaagttggtcttgttggtaccaataccatacatttgtgtttacagtttcttttcaagattgcaattttttaaagtatcaatatatagtaagatatttctgcagaggttctaacatttttgaagcctagtgaggccttgacctgattattgtatataaggttggaaattagctaggtgccatactaagtgtatcacttgcaaaatggcaccaccaccccacaaggctcctagttgaatatcatgcaaaagtgaacagctaggaatgttgtgtttctcctgtttcttatttgttaaatcgttctttcaataagctaatttgcaaaaagtactgcacatatttgcatcgttcttgaactgactttgaagtattaggttttcctttttacaatcaaatatcatgattcgtgcagattatcttgtacaatataaaactgggacaacctggagcttcattagatttgcacttgtaatgacattcatgtaggatgtggcttggcttgggtttcatctctaacctccaacttacttggggttaggctattgtctttgttaacaacatagaatttccttacttttagccccatttggaatacaggactatttctagaatttcaggaactagcgataaaaactggccttctcaatggttgttgaattctgcgtacaccatttgttatactgaaccagcaatcctaatggagactatagttatgtagtacattcagtcaggaccttatctgaatcttttggagaacaactaaagccaatacccaatagagttatgaaaacagatcatgcatcaggagacaaagaacaataatgcggaaatcttgtgaagaataaactaaagccagtagagctacggaaacgatcatgcatcaggagacaaagaacagtaatgtggcgcacgatccccttgtcagtagcaatggttatccctgtcatgattttgttgtgacatttgaattctttatgtgaatttatcctgtaagtgctctaggtctcaaaaagtggtttcatcagtgtggtagatcccaactattttttttctacaatatgttaaagttgtgttactttatacaattttggtcaagtctgtcataattggtgtaccaatgtctccagaatcaatatgtgagatagctactttcttttggtatttgctagaaccatggacctctctggaggtgctgaatcattttcttttccaacttaaaaatcccgcaggtctggcattgcaatcttggttttggttttttttttgtacaaaatgcaagctgatgagaagtacatgtagatatgttcagtttccccatttcatactaatatcctgatgtagtgtggagaatggttttctgacatatatttatgagttaggcactgtcctatatgtcccatatgcctcgatagtcatgcaaactttaaaaattgccatctctaataatttcaatgtccctgctcaaatcttttagcacattgggtggatgagacagtgcatagacagccatatacatatatagaattctattttcctcaaaatacttagtgacaaatagaatatttcccctaataactgatagtggatcgagagttatatcagttagagttttaaaataaattcttttagaggaatccgtgcattataattttcgtccatgaaatagtacttggtttccactcacatctttctgtaattaactgaaattttctacaattacagtaataaatagaatatgtctctgcaaggggtgcatcgatttaatttatctgattaacattagaactttttgaaatcggcaactccatgccccgctttcaatgctcttcaattcctcttttaacaacatatggagtagatgtaccttaaaatggttactgttgggcctttcatttcctcttagattacttttggattacaatgaagagtgtatgttccaaacatgctggtgttgtgggcaaaaacaatgatggtgctaattttttttccaaaggaataaaggaaatggagcttaaggcattttactgatttgaaatctatctattgataatttctttcagatcagatggagcaattcacaccatgattctgctttgcgacgcctgcatatacacgaagtaaaaagtatgaatatagaggagtgttgattgaatccatgaaggtgcctcagtgcggaattccttacattttgtccggaagcatggctgcttcaatgcagggtcatcttcaggaggttgctgtccaaatatcatctcacagctcatgtcttcaaaatctgaagaataaatatatagttgatgtaagtaattatgttacatttctcttgatacattcactattatctttagggactctgctttattctcgtttttattgacctagtattggaaaaaaccttcttgcttaattggaaataagctgtataggactatttagtagcactggcagtaaataacattcattgcttactcctagatctaaccactcgacaggataaaaaggaaagagagccttgcaaattccaacagaggttgatatctgattctgtggggtgatgtcataaaatatcagtatcttttgacctagaaaaaatgattgatgttgaaatattcagtgtatcaccatagaagactaacattcaaaactagtgcttctcataagtgaaattgaaccatattgctctgattatcgagacatgctggctcgtcactgccatgtgaaggtgcttgtactgtattttcacagcactacattgtggatttctggatttcacactactgttccacaacttgtccatgcaatttgccgtttcccactaagaatgacaagtaggggctagcactttcttcttctgtacaacttgcttgtgattgctttgtactccctccgttttttaatgtatgacgttgttgactttttgacaaacatttgaccattcatcttattcaaaattattgtgcaaatataaaaaaaatttaagtcatgcttaaagaacatttgatgataaattaagtcacaataaaataaatgataattgcatttttttttgaataagacgaatgatcatatatatctaaaaagtcatcgacgttataaattaaaaaacggaggtagtaacctgcaaacatgttggccccacttcagccctttctgtttcctgaatggtggccagtggttcccatacccaaaaagggcacagtcctcagattgtcggtaggtagaggtggcatgaaattaatatgtcaaattaagttctgtatttctcatagctctaaaccgttggtggtctatggacctattacattgattcaactttacttcactaattctgcttaaagtcgaaagttgatattttgagttcacttatgttttagcggcagtccgtataatgatccgctatagtaaaattaggtcaatgtcctgagaagttagaggcacaccaggtttcaacccaaattttcaactttgagatgatgttgatatgacaatccattattagtttcttgccaactttatgcaaaggaatggagtttgattatttttaccttattctaccaaattatatttaagttgttgtgtttacccactgatattcaggctttcctgatgaatcagagcagaggaagcttactgggagacatgtagaccttcatgccaagtgaatcttggatgaacttctggcatggaatcttgcaaaggtttgtgcacataccaacacaatttgtactttccagaaatctgccacaaataggattggagattaaaaaaaaagaaaagaaaaacagcaacaccagtagaaatcctgttcttcagtatttatgtatttttaaggtggttcttcagtatttattgatatatctgcacttaaaattctatttttttcttaacccagtgttaatcatggtagtttgtctaacgtgggtagaattgataataagcagcttgtggagtgtgagtaggattgtcagttgccacaattacgacgttgacaatacaacttgtgtcccagccatagttcttcaatttgtttttcatgagtggattaacttgagtaagagttgacatactgcaacaattcattcagaactaattgatggctgcagagtcatatgttaattgcaaatcatcaggttactacttatagacctgaaaatttttgtagtctgcctatgaagagctgggagtaggaaaccgtttgaccgatatgttacgtgatacccagcagttgaagaaattttctttacaaatgttcctcctagtcaaacttgtgaaacaatttcttgatgatgattgaattacctgcatttggggatatataccacgtttttctctttccttccttcaacttcagattccataacctttgttcaatgacagaatgatcactcagaagacaagttatccatacaagggcatttattccatactttatatgatatttgcaccacaaatgcttcgtacaactactttaaacaatgtaatgtcctgaaaacaaagagatattatatgtcgcaacctacattcaacagcattttaagatcttctgtagcaatatttctcaaattaacgtgtggcttcgtatcaattcattctgcagggctaccttcagcagaggcacaatcatgaattcattcttgtgaagacgcactaatcaggtatcaggcagctattcctttctgaactgaagtaacaaaaggaggaactgtgtatgtaatatatacctcacacggcccaaccaaccaaggaaaaaatatcgtggtgaatgcagcaaagtactccctggaaaatcttgaaggtggcatcatcaccttgatctgccgacagaattctcaatcaaagttgaggtaagaaataaaagaagagaacttttaaagtttcctccctttacagaagttctgtattttcctcaaaaaaaaaagagagaataaatgctgaattttacttcctgttcaaataaaaaaaagttttaggttttttaaatttcaataattcatacatgattgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0587100, RefSeq:Os11g0587100