Os11g0587500

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Revision as of 09:15, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0587500| Description = RabGAP/TBC domain containing protein| Version = NM_001074705.1 GI:115486058 GeneID:4350806| Length = 3866 bp| Defin...")
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Gene Name

Os11g0587500

Description

RabGAP/TBC domain containing protein

Version

NM_001074705.1 GI:115486058 GeneID:4350806

Length

3866 bp

Definition

Oryza sativa Japonica Group Os11g0587500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:24110045..24113910

Sequence Coding Region

24111289..24111357,24111447..24111535,24111623..24111745,24111852..24112111,24112644..24112747
,24113318..24113413,24113636..24113734

Expression

GEO Profiles:Os11g0587500

Genome Context

<gbrowseImage1> name=NC_008404:24110045..24113910 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:24110045..24113910 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgagaagggcggggaaaggggaggttgcagatgggttctaccagattcgctcggattgcacccacaaggtccccgagaccaagttcaagatcaaggttgggaaaacgttgagcgttcggaaatggcatgctgcgtttacgcgtgaaggccgtttggatattgcttcggttctgaaccggatacagaaagggggtgtccatcctacaatcaggggagaggtctgggagtttttacttggctgttttgatcctgggagcacttttgatgagcgcgagcagattagggagaaaagaagaatacaatatgccatatggaagcaagaatgcaaagatatggactcccatgttggtagcggtaaaattatcacagccccaattataactgaggatggaaaacctattaaggatcctttggttttgctcgaagctacttcagaccagcacacaatgcaaggtagttcatccagcagcaggaacgaaaatgaggtggacaagtccgaaaattgtgtggtggataaacaaattatcgaatggaagcttttgctacatcaaattggccttgatgtgctgcgcactgatcgatccatggtgttttatgagaacaaagaaaatctttcgaagttatgggatattcttgctgtatatgcttggatcgacaaagaaattggctattgtcaaggaatgagtgatttatgctcaccgatgatagtgctgctcaacgacgaagcagatgcattttggtgctttgagagattaatgcgtagactgatgcacacagcaatctgttggggtggagaaccagcttcagcaccttgcgtctatcattcaagtgcttga</cdnaseq>

Protein Sequence

<aaseq>MLRRAGKGEVADGFYQIRSDCTHKVPETKFKIKVGKTLSVRKWH AAFTREGRLDIASVLNRIQKGGVHPTIRGEVWEFLLGCFDPGSTFDEREQIREKRRIQ YAIWKQECKDMDSHVGSGKIITAPIITEDGKPIKDPLVLLEATSDQHTMQGSSSSSRN ENEVDKSENCVVDKQIIEWKLLLHQIGLDVLRTDRSMVFYENKENLSKLWDILAVYAW IDKEIGYCQGMSDLCSPMIVLLNDEADAFWCFERLMRRLMHTAICWGGEPASAPCVYH SSA</aaseq>

Gene Sequence

<dnaseqindica>2554..2622#2376..2464#2166..2288#1800..2059#1164..1267#498..593#177..275#cccaaagctagagtctttcttgcttctcctgagtcctgacttcttgatccaccgattgttcttcgatttcttgcttcttgattcgtcgccgctgctgctgctggaggcagaaagggagcacaagatcgagcaatccaagctgcaattagaggaggaggaagaggaagaggaggaggatgctgagaagggcggggaaaggggaggttgcagatgggttctaccagattcgctcggattgcacccacaaggtccccgagaccaagttcaagatcaaggtctcaccttttttcttgattcccctcatctctcctcctcattaattactactactgctttgatttacttttctgatgtatcatccttcatcgctgcgagttaatcgttctaattcaaagggttaattcaaagggttaattgttggtttatgagcaattaattgagccttctgggagtgtgccggtagattgatttatccctctctgcaattaatttttcaggttgggaaaacgttgagcgttcggaaatggcatgctgcgtttacgcgtgaaggccgtttggatattgcttcggttctgaaccggatacagaaaggggtaaattaaatcattctttgaaagaaaaaaaaaacttttgtcttgttgccactttgtcctttctgtgatatggaaaccttttatgtgttttcctgggagggaggctatctaatgtgatactgtcagtttggtaaggttagaggaaaaggaattggttagtccctcaaattgcacatgcttgatagaaggaacaaggaattgagtcattccatccaagttaggtgtgcgcgagcgcagggttaccccgtgggtaaacgttgacgcgctccagtttaacaagtaaactacatacacaatatgaactagaaagaaatgtattttagttggtttagttgaactagggtggatcatctcactcaatcgtacttcagtgattgaacatgggttagtccctatttgacaaggaacggttagcaactcaatggtatatgtccacagagtgacctgcgcccatccctaaccaaaataatgggatggccccatggtggaacaacccatccatcataataaacatctcgatagttcccggtatagacgaatatctcaaaatgatctgtttatttctcttagggtgtccatcctacaatcaggggagaggtctgggagtttttacttggctgttttgatcctgggagcacttttgatgagcgcgagcagattagggagaaaagaaggtaagcgactttctataaatttgttcagtaatttggttttccttacaaagagtcgaatacttgaatgcacatgctttgccacagatagaaagtatcatgttggaggcacaaccaaatcgggcctgtgccaccacttgcatctgcccttgctctagtttgtgcttctgcaatcttgttttgtctttcatgccctttggtttgccactgaacccagctgtggctcgcattagtcattagtcactactccttggtgaagagccagacaaacaagtgctgaaatgcagatcacatagtgcagcaaagggttgcagcatgcagtcttgcacaacgatatcaccttggaaatggaagattggtgctaactctctttgacatgcctactgcaaactgaaaattggttattatgactgataagaattgcagttccttcccccctggttcttcatactatttttttattgcgataattaggacgcaatcatcaaactttttatctgtttagcctcaacattgtaacagacgatctatgtagaatacaatatgccatatggaagcaagaatgcaaagatatggactcccatgttggtagcggtaaaattatcacagccccaattataactgaggatggaaaacctattaaggatcctttggttttgctcgaagctacttcagaccagcacacaatgcaaggtagttcatccagcagcaggaacgaaaatgaggtggacaagtccgaaaattgtgtggtggataaacaaattatcgaatggaagcttttgctacatcaaattggtaaggtccatacatcaatctttttgttcctcctgcctgccattgttccattgtgcctgcgcttataaatgttcctaacttttgtgtccacgtgtacgttacgcaggccttgatgtgctgcgcactgatcgatccatggtgttttatgagaacaaagaaaatctttcgaagttatgggatattcttgctgtatatgcttggatcgacaaagaaattggctattgtcaaggtggggtgcacaatgctgtcgtcttgcacaaaaaatgcttatgtagttcccaaataatctgacaggtgtttattcaatcttaaacaggaatgagtgatttatgctcaccgatgatagtgctgctcaacgacgaagcagatgcattttggtgctttgagagattaatgcgtagactggtacaactgcttctcaaaaagtctttaatgtggggtttttttcttataattttagtagtaacttttattataaagcgaggaaatttcagatgcacacagcaatctgttggggtggagaaccagcttcagcaccttgcgtctatcattcaagtgcttgacccaaaattacatgaccacctaggtacacaatgaaaactctcaagattgtaacagtcaaccctggacgtccatttgctgatgttacattctgcaattggtcctgttgatccctgaatgcagaaacacttggtgggggtgattatctctttgcattccgcatgttcatggtattgtttcggcgtgaattatcatttggggactcactatacctttgggaggtaaacactgctggtcattctgacatgtcgtactaaatcttaaacatcctattcattcatctgaagagatttgatctattaaccaacacaattgatgttttatgcagtcggtcatattatcaaaaacatttttttactacagtagataattaattgatgatcatattttcttctgaaacttgtttgcagatgatgtgggctctagaatatgatcctgacatcttctccacatatgaacatattgatgctgcaactggtgtaactccaggacataggcaaaaagtaaaatcaattcgccaatttggcaagtacgagagagacaatatgaagaatggggctactagtgacaacgatggtcctgttccgatttctgttttcctggttgctagtgttctgaaggagaacagtgcgaagctcctgcaggaagctcgagggattgatgatgttattagggtaagttggatcgatccattcctattatcttctttagaaaaagaatccataagattgcttcattgtcagatgaacataacatataatatacgttctaaactaacttggagtaccatataagaaaactcacaatcattgatttcagattttgaatgatgttaatgggaatttggatgcgaaaaaggcttgcgctgttgcattgaaacttcacaggaaataccttaaaaaggtaactaccagttacaagttcctctttactgcagcttattaccacacattgcaatgcttgatgaagtattaaggtatactggtttaccaatcgttgttctttacttctcttggcagatccagggaaagaagccataacaacgagctccgggttactcctggttttgatcgtggctctgttttactcctgcttttctcctaatttgtgagaaaaatgtacaaagttcgttaatttgtggctggtaagaattctaccactaaactatagccaccatataacacacggagaatattacatgtaacattatttattgatgaatcaatggaggccaaagggaaacaac</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0587500, RefSeq:Os11g0587500