BGIOSGA021844

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Revision as of 13:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021844| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021844, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA021844

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021844, complete gene.

LocusTag

OSJNBA0015I14.7

Ensembl Transcript ID

BGIOSGA021844-TA

Ensembl Protein ID

BGIOSGA021844-PA

Length

4032

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3836707..3840738

Sequence Coding Region

3839909..3840738,3836707..3838657

Genome Context

<gbrowseImage1> name=IndicaChromosome06:3836707..3840738 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:3836707..3840738 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGCGTCCTGGTGAGCGCGGCGACCGGAGTGATGAACTCCGTCCTCGCAAAGCTCACGGCCTTCCTCGGCGAGGAGTACAAGCACGCCAAGGGAGTCCGCGACGACCTCGTCTTCCTCCGGTCCGAGCTGAGCACCATGAATATAGTTCTGCAAAAGCTAGCAGATGTGGATCAGCTCGACGAGCTCAGCAGAGACTGGAGGGACAGGGTGCGGGATCTCGCCTACGACATCGAGGACTGCATCGACCTCTCCGTCCACCGCCTCCGCGGCAGCGCCGGCGAAAGCGGACTCGCTGCCAAGGTGGCGCGCATGGCCAAGAAGATCGGAGCGTTCCGTCAGATCGCGAGTCAGATCCAGAAGCTCAAGGCCCGTGTCGTGGAGGTCAGCGAGCGGCGTAACAGGTACACTCTTCATGGACTTGTACCAACTAGCTCGGATGCTTCCTCCTCGACCAAGGTTGATGTCCGGCTGTGCGCGCTCTGGACGGAAACGAAGCACCTCGTCGGCATCGATGGCCCTAGGGATGACATCATCAGTCGGTTGATGGAGCAGAAGCAGGAGTCGTTGTCATCGGTGCAGCACGGTGTCAGGATGGTATCCATCGTCGGGTGTGCGGGCTTGGGCAAGACCACTCTGGCCAAACAAGTGTACGACAAAATCAAAGGGGAATTCGAGTGCAAGGCCTTTGTTTCGGTGTCTCAGAAACCGAACATAAAGGAGCTTATCCTCAACATTTCTAATCAAGTTGGCAACAAGTCAACAAACATGTCGGATGATGTAGCAAATCTGGTGGATAATCTTAGGGAATATCTCAAGCAAAAAAGGTATATTGTCGTAGTGGATGATATATGGAACCCAGAACCATGGAACTTCATTGGAGAAGCATTGGTCAAAACTAGTCCTGGTAGCATAATAATTTTGACGACACGTGTGAAAGAAGTGGCGATGTCATCTTCATCTTCTCATGGTGGTTTTGTTTATCCGATGAAACATCTCGATGGCGCTCACTCCAAAAGGTTGTTTTACAAAAGAATTTTTGACTGTGAAGAGCAATGTCCTCCTGAATTTGAACAAGCTTCTAAAGAGATACTGGAAAGATGTGATGGTATACCCCTAGCAATCATTTCCATATCCAGCTTCTTGGCTGATCGTCAATCGTTATATCACTGGAATGAGGTAAAAAAAATTATCAGTTCTCCAATACCAGGAAATAAGGATCTTGAGACCATGCAATCAGTGTTAGCACTCAGTTATTACAACCTTCCACATGATTTAAGAAGTTGCCTATTATACTTGAGTTCATTCCCAGAAGATTGTGAAATTAGAAAGTACCGCTTGGTAAGCAGATGGATTGCAGAAGGATTTATCAATGCAAGACCAGGAGAAAATCTATATGAAGCAGGGCTGAGGTATTTCAATGTGCTGATAAACCAGAGCTTGATCCAACCATGGAATGAGCACTACGGTGAGGTGCTGAGCTGCCGTGTTCACGACGTCATTCTTAATTTCATAGTGTCCAAATCAGTAGAGGAGAACTTTATGACCTTGTTGGATCCGTCTGGTCCTGTACCTTTGCAGCATAGCAACTGCTGCAAGGTTCGTCGCATGTCTCTCCAGGGTAGCTACTGCCAAGAGAAATTTGCCTCGAGCATGAAGTCGATTAAGCCTCATGTCCGGTCACTTGCTTGTTCTATGGACTGCACAGGATTGCATCCTCTATCGGAATTTAAAGTTGCAAGAGTACTGGATCTAGAAGGGTGCGAATCATTGACAAACAACCATCTTGCTAATATAGAAAAGTTAGCCTATTTGAGGTATCTGAGCATTAGCGGAACAGGAGTAAGTGTGCTCCCCGCCAATATTGGGTGTCTCCAGCATTTGGAGACATTAGATATAATAGGTACTCAAGTTAAAGAATTACCACCATCCATTGTTCTACTTCAGCAATTGGTTCGTCTGTTTGCCAATTTTGAAGTCATGTTCCCTGCAGAAGGTGTTAGCAAGATGCAAGCATTGGAGCAGCTAACAGGTCTCTTGCCCTTCAATCAACCGGTAAGCTTTTTGAAGGAGCTAGGTGAGCTTACCAAGCTGAGAGTACTATCGGTATCTTGGATGCCTCACCATGTTAGAGATTCTGATGAGGCCCATGCCGAGCATGAAAAGAGCTACGAGAAGATTTTCATCTCCTCACTTAATGCACTGGACAGACATAGCCTTCAATATCTGTCTCTTTATTCGGATATAGCTGCAAAACGCTTCTTTGATTCGTGGTTCCCTTCCCTAAAAAACCTCCGGAGATTGAGCATCAAAAACATGTTCAAGAGGGGAACCATTCCAAGTTGGATACGCCTTGTTGCCAAGCTTGAGCAATTAAAGCTCGAAAATGTGTATGTTAGGCAGGACGACTTCGAAATGCTTGGAGATCTGAAAGCTCTCGAATCTCTTGCCCTTCCCTGTTCAGACACACAAGGATCATGGCTCACCATCAGCAACCATGGTTTCCGATGTCTCAAGTTTGCCTTTCTTTGCAACGTGTTGTTTATGCCTGATTCCATGCCTAATCTGAAGGACCTCCGAATTGACATAGTATTGGATGAGGTTGGTGAGAATGATTCCGTCTTCCAGCACCTCCCCAACACCCTCTGCAGAGTCCATGCCTGGATTTCTGGCAATCTAGATGCGGTCTCAAAACTGAAAGAAAAAATCTTGAACATTGCGAACACACATCCCAACCGTCCCTCACTCACGACTGCGACATACATTCAGGAGCACTAG</cdnaseq>

Protein Sequence

<aaseq>MEGVLVSAATGVMNSVLAKLTAFLGEEYKHAKGVRDDLVFLRSELSTMNIVLQKLADVDQLDELSRDWRDRVRDLAYDIEDCIDLSVHRLRGSAGESGLAAKVARMAKKIGAFRQIASQIQKLKARVVEVSERRNRYTLHGLVPTSSDASSSTKVDVRLCALWTETKHLVGIDGPRDDIISRLMEQKQESLSSVQHGVRMVSIVGCAGLGKTTLAKQVYDKIKGEFECKAFVSVSQKPNIKELILNISNQVGNKSTNMSDDVANLVDNLREYLKQKRYIVVVDDIWNPEPWNFIGEALVKTSPGSIIILTTRVKEVAMSSSSSHGGFVYPMKHLDGAHSKRLFYKRIFDCEEQCPPEFEQASKEILERCDGIPLAIISISSFLADRQSLYHWNEVKKIISSPIPGNKDLETMQSVLALSYYNLPHDLRSCLLYLSSFPEDCEIRKYRLVSRWIAEGFINARPGENLYEAGLRYFNVLINQSLIQPWNEHYGEVLSCRVHDVILNFIVSKSVEENFMTLLDPSGPVPLQHSNCCKVRRMSLQGSYCQEKFASSMKSIKPHVRSLACSMDCTGLHPLSEFKVARVLDLEGCESLTNNHLANIEKLAYLRYLSISGTGVSVLPANIGCLQHLETLDIIGTQVKELPPSIVLLQQLVRLFANFEVMFPAEGVSKMQALEQLTGLLPFNQPVSFLKELGELTKLRVLSVSWMPHHVRDSDEAHAEHEKSYEKIFISSLNALDRHSLQYLSLYSDIAAKRFFDSWFPSLKNLRRLSIKNMFKRGTIPSWIRLVAKLEQLKLENVYVRQDDFEMLGDLKALESLALPCSDTQGSWLTISNHGFRCLKFAFLCNVLFMPDSMPNLKDLRIDIVLDEVGENDSVFQHLPNTLCRVHAWISGNLDAVSKLKEKILNIANTHPNRPSLTTATYIQEH</aaseq>

Gene Sequence

<dnaseqindica>1..830#2082..4032#ATGGAGGGCGTCCTGGTGAGCGCGGCGACCGGAGTGATGAACTCCGTCCTCGCAAAGCTCACGGCCTTCCTCGGCGAGGAGTACAAGCACGCCAAGGGAGTCCGCGACGACCTCGTCTTCCTCCGGTCCGAGCTGAGCACCATGAATATAGTTCTGCAAAAGCTAGCAGATGTGGATCAGCTCGACGAGCTCAGCAGAGACTGGAGGGACAGGGTGCGGGATCTCGCCTACGACATCGAGGACTGCATCGACCTCTCCGTCCACCGCCTCCGCGGCAGCGCCGGCGAAAGCGGACTCGCTGCCAAGGTGGCGCGCATGGCCAAGAAGATCGGAGCGTTCCGTCAGATCGCGAGTCAGATCCAGAAGCTCAAGGCCCGTGTCGTGGAGGTCAGCGAGCGGCGTAACAGGTACACTCTTCATGGACTTGTACCAACTAGCTCGGATGCTTCCTCCTCGACCAAGGTTGATGTCCGGCTGTGCGCGCTCTGGACGGAAACGAAGCACCTCGTCGGCATCGATGGCCCTAGGGATGACATCATCAGTCGGTTGATGGAGCAGAAGCAGGAGTCGTTGTCATCGGTGCAGCACGGTGTCAGGATGGTATCCATCGTCGGGTGTGCGGGCTTGGGCAAGACCACTCTGGCCAAACAAGTGTACGACAAAATCAAAGGGGAATTCGAGTGCAAGGCCTTTGTTTCGGTGTCTCAGAAACCGAACATAAAGGAGCTTATCCTCAACATTTCTAATCAAGTTGGCAACAAGTCAACAAACATGTCGGATGATGTAGCAAATCTGGTGGATAATCTTAGGGAATATCTCAAGCAAAAAAGGTGCACTCTCATGTTCCGTTTTGTTTTCCGCTGACCTTTCTCGCTTTGCTGCAGAATATAAGGATGGATTTATGTTGAATGTTGTAGAACTTATCTTTTTTTAAGGATAGATTTTTTTTGGGTTAAATATTGTGAAAATAATGTGAGAAATATAAGTTAGTATGCTTGTATGTTGAGGTTTACAATATAATGAATTGTAGGAGTAATTGCTATGCATACATGATGGGTTTTATATTACTTCCTCCTTTTCATATTATAAGACTTTCTAGCATTGCCCACATTTATATATATATTAATGAATCTAGACATATATGTGTGATTAGATTCATTAACATCTATATGAATATGGACAATGTTAGAAAGTCTTATAACCTGAAACGGAGGGAGTAGGTTCTTAGTAGGTTAATGTTGCATGCTTGCGTTTTAACCTTTAGAGTGTACTAATAACTACTATGCGTACTGTGCTTGCATGTTAAGCTTTAGATGTTTAGTAGGTTGTAACTTTATAGAAGATATAGATTATAGTCTATTTTTTTATCTTTAACTTTGCTTCAAGCCCTATGCATGAACTCAAAATTATATATTCTTAAGTTTTCATCAACACTTTCCTAAACATCCTTCAACTATACAAAACTTGGAACTTAGCTAAAGACTGAAGGAGGCATTAATTTTATTATGTGCTACGATTAATAGACAATAAACACTGCCAAGAAGACCTACTAGTTCAGTTACAAAAATAGTTGGACAAAAACAAAGAAAAAATAAATCCTTTTGCATTTTATTAGTTCAGTTACAGAAAATAGTAGGCTCAAAACAAACAATTATTTGGTTTGTTTTCAACATGAGATAAAAACAAGTGCCCCAGTTTGATGTATTTTGTTCTAAGCACTGAGTGGGCCAAGCTTTCCTAAGTATTTTGCTGTGAGGCAAAGGTAGCTCAAATGCTGATGTTGTAATTCTAAGCACTGTTTTTCTTTTCTGGGACACAGAACCCTGATGTATACTTGTTGCGAACCAGAGTAAACTATTGTTTAATGTTATGTAAGCTATAGTTACCTCGTAATACAAAGGGTAAAACCAATTTCAAGAATTTTGTAAATCAACACCCAACCAAACATGTGAGCATGCTTTGAAAATCTAATTCTGGTTCTTTGCAAGGGTATCATTTATAATTTCGGTCCTTTGAAAATCTATACATCAATTATACTTTAATTTTCTTTTCCATGATAAAATTAAAATTACATGTGGCAGGTATATTGTCGTAGTGGATGATATATGGAACCCAGAACCATGGAACTTCATTGGAGAAGCATTGGTCAAAACTAGTCCTGGTAGCATAATAATTTTGACGACACGTGTGAAAGAAGTGGCGATGTCATCTTCATCTTCTCATGGTGGTTTTGTTTATCCGATGAAACATCTCGATGGCGCTCACTCCAAAAGGTTGTTTTACAAAAGAATTTTTGACTGTGAAGAGCAATGTCCTCCTGAATTTGAACAAGCTTCTAAAGAGATACTGGAAAGATGTGATGGTATACCCCTAGCAATCATTTCCATATCCAGCTTCTTGGCTGATCGTCAATCGTTATATCACTGGAATGAGGTAAAAAAAATTATCAGTTCTCCAATACCAGGAAATAAGGATCTTGAGACCATGCAATCAGTGTTAGCACTCAGTTATTACAACCTTCCACATGATTTAAGAAGTTGCCTATTATACTTGAGTTCATTCCCAGAAGATTGTGAAATTAGAAAGTACCGCTTGGTAAGCAGATGGATTGCAGAAGGATTTATCAATGCAAGACCAGGAGAAAATCTATATGAAGCAGGGCTGAGGTATTTCAATGTGCTGATAAACCAGAGCTTGATCCAACCATGGAATGAGCACTACGGTGAGGTGCTGAGCTGCCGTGTTCACGACGTCATTCTTAATTTCATAGTGTCCAAATCAGTAGAGGAGAACTTTATGACCTTGTTGGATCCGTCTGGTCCTGTACCTTTGCAGCATAGCAACTGCTGCAAGGTTCGTCGCATGTCTCTCCAGGGTAGCTACTGCCAAGAGAAATTTGCCTCGAGCATGAAGTCGATTAAGCCTCATGTCCGGTCACTTGCTTGTTCTATGGACTGCACAGGATTGCATCCTCTATCGGAATTTAAAGTTGCAAGAGTACTGGATCTAGAAGGGTGCGAATCATTGACAAACAACCATCTTGCTAATATAGAAAAGTTAGCCTATTTGAGGTATCTGAGCATTAGCGGAACAGGAGTAAGTGTGCTCCCCGCCAATATTGGGTGTCTCCAGCATTTGGAGACATTAGATATAATAGGTACTCAAGTTAAAGAATTACCACCATCCATTGTTCTACTTCAGCAATTGGTTCGTCTGTTTGCCAATTTTGAAGTCATGTTCCCTGCAGAAGGTGTTAGCAAGATGCAAGCATTGGAGCAGCTAACAGGTCTCTTGCCCTTCAATCAACCGGTAAGCTTTTTGAAGGAGCTAGGTGAGCTTACCAAGCTGAGAGTACTATCGGTATCTTGGATGCCTCACCATGTTAGAGATTCTGATGAGGCCCATGCCGAGCATGAAAAGAGCTACGAGAAGATTTTCATCTCCTCACTTAATGCACTGGACAGACATAGCCTTCAATATCTGTCTCTTTATTCGGATATAGCTGCAAAACGCTTCTTTGATTCGTGGTTCCCTTCCCTAAAAAACCTCCGGAGATTGAGCATCAAAAACATGTTCAAGAGGGGAACCATTCCAAGTTGGATACGCCTTGTTGCCAAGCTTGAGCAATTAAAGCTCGAAAATGTGTATGTTAGGCAGGACGACTTCGAAATGCTTGGAGATCTGAAAGCTCTCGAATCTCTTGCCCTTCCCTGTTCAGACACACAAGGATCATGGCTCACCATCAGCAACCATGGTTTCCGATGTCTCAAGTTTGCCTTTCTTTGCAACGTGTTGTTTATGCCTGATTCCATGCCTAATCTGAAGGACCTCCGAATTGACATAGTATTGGATGAGGTTGGTGAGAATGATTCCGTCTTCCAGCACCTCCCCAACACCCTCTGCAGAGTCCATGCCTGGATTTCTGGCAATCTAGATGCGGTCTCAAAACTGAAAGAAAAAATCTTGAACATTGCGAACACACATCCCAACCGTCCCTCACTCACGACTGCGACATACATTCAGGAGCACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021844