BGIOSGA021869

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Revision as of 13:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021869| Description = Os06g06390-like proteinPutative NB-ARC domain-| Definition = Oryza sativa Indica Group BGIOSGA021869, complete gene.| ...")
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Gene Name

BGIOSGA021869

Description

Os06g06390-like proteinPutative NB-ARC domain-

Definition

Oryza sativa Indica Group BGIOSGA021869, complete gene.

LocusTag

OS06G0158400

Ensembl Transcript ID

BGIOSGA021869-TA

Ensembl Protein ID

BGIOSGA021869-PA

Length

3865

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3518897..3522761

Sequence Coding Region

3521814..3522761,3518897..3520942

Genome Context

<gbrowseImage1> name=IndicaChromosome06:3518897..3522761 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:3518897..3522761 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGCGCCATTGTGAGCTTGACCGAGGGCGCCGTGCGGGGGCTCCTCCGGAAGCTCGCCGGCGTGCTCGCGCAGGAGAGCTCGCCGGCGCAGCGCGTCCACGGCGAGGTGCAGTACATCAAGGACGAGCTGGAGAGCATGAACGCCTTCCTCCGCAGCGTCTCCACGTCGCCGGAGGACGCCGCCGGCCACGACGACCAGGTGAGGGTCTGGATGAAGCAGGTCAGGGAGATCGCCTACGACGCCGAGGACTGCATCGACGTGTTCGTCCGCGGCCGCAGCCACCCCGCCGCCGCCGCCGGAGACGAAGGTCGCCTCGTGGCCTCACTCCGCCGCTTCGTCCGCCTACTGGCCGGCGCGCTAGGAGTAGGAGGAGGAGACCGCTCCGTCGCGGCCCAGCTCCGGGAACTGAAGGCCCGCGCCCGCGACGCCGGCGAGCGGCGCACGAGGTACGGGGTGTCGCTGGCGGCGGCGGCGGTCAGGGGCGGCGGCGGGTCGTCGTCGTCCGGGCGGCTCGACCCCAGGCTGCACGCGCTGTTCACGGAGGAGGCGCAGCTGGTGGGGATCGACGGGCCGAGGGAGGAGCTCGTGGGGTGGGTGATGGAGGAGGAGCCGCGGCTGCGGGTGCTCGCCGTCGTCGGGTTCGGCGGGCTCGGCAAGACCACGCTGGCGAGGATGGTGTGCGGGAGCCCCCGGGTGAAGGGCGCCGCCGACTTCCAGTGCTCGCCGCCGCTCGTCGTCGTGTCGCAGACGTTCAGCATCACGGCGCTCTTCCAGCACTTGCTCAGGGAGCTCATCCAGCGCCCGCGCAAGGCAATGGCCGCCGTCGCCGCCGCCGGCGGCGGCGGCGGCGACCTTGTCGCGTACGATGCATTGCAGGGGATGGAGAGGTGGGAGACGGCAGCGCTCGCCAGCAAAGCTGAGGGAATACCTGCAAGACAAAAGTTAATTATTTTATTTGTTGCCGAGTTTGTTCATATATGTGGAACTATTACATTGTATAGGTACATTGTGATATTGGATGATATATGGTCTTCATCAGCATGGGAGAGCATCAAATGCGCATTTCCAGATAATAAAAAGGGTAGCAGGATCATAGTAACCACCAGAAACGAGGATGTCGCCAACACCTGCTGCTGCCGCCCCCAAGATCGCATCTACAAGATCCAACGCCTCTCAGATGCGGCATCGCGGGAGCTGTTCTTCAAGAGGATCTTTGGCATGGCGGATGCCGGAGCGCCAGACGACGATGAGCTGAAACAAGTTTCAGATTCCATCCTGAAGAAATGTGGAGGGCTGCCTCTAGCAATAGTGAGCATCGGTAGCCTCCTCGCAAGCAAGCCAAACAGGAGCAAAGAAGAGTGGCAGAAGGTTTGTGACAACTTGGGCTCTGAACTTGAGTCAAATCCTACTCTTGAAGGCACAAAGCAGGTGTTAACTCTGAGCTACAATGATCTGCCCTACCATCTGAAGGCATGCTTCTTGTATTTGAGTATCTTTCCTGAAAATCATGTGATCAAGAGGGGACCTTTGGTGAGAATGTGGATAGCTGAAGGTTTTGTCACCCAGAGGCATGGATTGAGCATGGAACAGGTCGGTGAAAGATACTTTGATGAGTTTGTGAGCAGGAGCATGGTTCATCTTGTCAGAATCGATTGGAGTGGCAAGGTGAGAAGCTGCAAGGTTCATGATATAATGCTTGAAGTCATCGTCTCCAAGTCACTTGAGGAAAACTTTGCATCCTTCTTCTGTGACAATGGAACCGAACTGGTTTCGCATGACAAAATCCGCCGCCTCTCCATCCGCAGCAGTAGCTACTCATCAGCTCAAAGAACAAGCAACAGTGTAGCTCATGTTCGCACCTTCAGAATGTCACCTTCAATTGACAATATCCCATTCTTCTTTCCACAATTGCGGTTGTTAAGAGTGCTGGACATGCAAGGCAGCCGTTGCATGAGTAACAAGAATTTGGACTGCATCTGCAGATTTTTCCAGCTCAAATACCTAAGCCTCAGAAACACCAGTGTGTCCATACTTCCGAGGTTAATTGGGAATCTGAATCACCTGGAGACACTGGATATAAGAGAGACACTTATCAAGAAGCTGCCTAGTAGTGCAGCTAACCTGACTTGCCTAAAGCATTTGTTAGCAGGGCACAAAGAGCAACTTACAAGGACATCCAGTGTGAAGTTTTTGAGGCCATCCTCAGGTCTAAAGATGAGCCATGGAGTGATCAGAAACATGGCAAAGCTGCAATCACTTGTCCATGTAGAGATAAAAGAACATCCATCAGTGTTCCAGGAGATCGCCTTGCTGCAAAATCTACGGAAGCTCAGTGTTCTCTTTTATGGTATAGAGGTAAACTGGAAGCCCTTTCTGGAGTTGTTGAATATGCTGAGTGGCTCTGTGCGATCACTCTCCATTGACATCTTCGACGCACAAGGAAACATCTCTATCTCATCACTGGAGATGCTTTCTTCCTTAGTGTCACCTCCCATTTTCATCACTAGCTTCAGCCTGACTGGCAAGCTTGGTAGTCTACCTCCTTGGGTAGCATCACTTAGAAGCGTCTCGAGGCTTACTCTTCGCAGGAGCCAACTCCGTGCTGATGCCATACATGTCCTTGGAGGCCTGCAAAATCTGCTCTGCCTGAAACTCTATCACAAATCATATGCTGATGATCGCCTCGTTTTTCCACAGGGAGGATTTGCCAGGGTCAAGCTTCTGATCGATGATAACCTGGTGAACCTTGAAAAGTTGCATTTCAATGAGGGATCGATGCCTAATCTTGAGAGGCTGACATTGTCATTCCTGAGAGAACCCAAGGATGGCATCTCAGGTCTGAACAATCTCCTGAAACTGAAGGAGGTAGAGTTCTTTGGCAACATCGTATCATCTGTGGTGAGCAAAGTGGTGTCATGTGTGAAGGATCATCCAAATCATCCGAGAGTTGTAGGTGACAAATGGAACATTGTGACGGTGTACAATTGA</cdnaseq>

Protein Sequence

<aaseq>MEGAIVSLTEGAVRGLLRKLAGVLAQESSPAQRVHGEVQYIKDELESMNAFLRSVSTSPEDAAGHDDQVRVWMKQVREIAYDAEDCIDVFVRGRSHPAAAAGDEGRLVASLRRFVRLLAGALGVGGGDRSVAAQLRELKARARDAGERRTRYGVSLAAAAVRGGGGSSSSGRLDPRLHALFTEEAQLVGIDGPREELVGWVMEEEPRLRVLAVVGFGGLGKTTLARMVCGSPRVKGAADFQCSPPLVVVSQTFSITALFQHLLRELIQRPRKAMAAVAAAGGGGGDLVAYDALQGMERWETAALASKAEGIPARQKLIILFVAEFVHICGTITLYRYIVILDDIWSSSAWESIKCAFPDNKKGSRIIVTTRNEDVANTCCCRPQDRIYKIQRLSDAASRELFFKRIFGMADAGAPDDDELKQVSDSILKKCGGLPLAIVSIGSLLASKPNRSKEEWQKVCDNLGSELESNPTLEGTKQVLTLSYNDLPYHLKACFLYLSIFPENHVIKRGPLVRMWIAEGFVTQRHGLSMEQVGERYFDEFVSRSMVHLVRIDWSGKVRSCKVHDIMLEVIVSKSLEENFASFFCDNGTELVSHDKIRRLSIRSSSYSSAQRTSNSVAHVRTFRMSPSIDNIPFFFPQLRLLRVLDMQGSRCMSNKNLDCICRFFQLKYLSLRNTSVSILPRLIGNLNHLETLDIRETLIKKLPSSAANLTCLKHLLAGHKEQLTRTSSVKFLRPSSGLKMSHGVIRNMAKLQSLVHVEIKEHPSVFQEIALLQNLRKLSVLFYGIEVNWKPFLELLNMLSGSVRSLSIDIFDAQGNISISSLEMLSSLVSPPIFITSFSLTGKLGSLPPWVASLRSVSRLTLRRSQLRADAIHVLGGLQNLLCLKLYHKSYADDRLVFPQGGFARVKLLIDDNLVNLEKLHFNEGSMPNLERLTLSFLREPKDGISGLNNLLKLKEVEFFGNIVSSVVSKVVSCVKDHPNHPRVVGDKWNIVTVYN</aaseq>

Gene Sequence

<dnaseqindica>1..948#1820..3865#ATGGAGGGCGCCATTGTGAGCTTGACCGAGGGCGCCGTGCGGGGGCTCCTCCGGAAGCTCGCCGGCGTGCTCGCGCAGGAGAGCTCGCCGGCGCAGCGCGTCCACGGCGAGGTGCAGTACATCAAGGACGAGCTGGAGAGCATGAACGCCTTCCTCCGCAGCGTCTCCACGTCGCCGGAGGACGCCGCCGGCCACGACGACCAGGTGAGGGTCTGGATGAAGCAGGTCAGGGAGATCGCCTACGACGCCGAGGACTGCATCGACGTGTTCGTCCGCGGCCGCAGCCACCCCGCCGCCGCCGCCGGAGACGAAGGTCGCCTCGTGGCCTCACTCCGCCGCTTCGTCCGCCTACTGGCCGGCGCGCTAGGAGTAGGAGGAGGAGACCGCTCCGTCGCGGCCCAGCTCCGGGAACTGAAGGCCCGCGCCCGCGACGCCGGCGAGCGGCGCACGAGGTACGGGGTGTCGCTGGCGGCGGCGGCGGTCAGGGGCGGCGGCGGGTCGTCGTCGTCCGGGCGGCTCGACCCCAGGCTGCACGCGCTGTTCACGGAGGAGGCGCAGCTGGTGGGGATCGACGGGCCGAGGGAGGAGCTCGTGGGGTGGGTGATGGAGGAGGAGCCGCGGCTGCGGGTGCTCGCCGTCGTCGGGTTCGGCGGGCTCGGCAAGACCACGCTGGCGAGGATGGTGTGCGGGAGCCCCCGGGTGAAGGGCGCCGCCGACTTCCAGTGCTCGCCGCCGCTCGTCGTCGTGTCGCAGACGTTCAGCATCACGGCGCTCTTCCAGCACTTGCTCAGGGAGCTCATCCAGCGCCCGCGCAAGGCAATGGCCGCCGTCGCCGCCGCCGGCGGCGGCGGCGGCGACCTTGTCGCGTACGATGCATTGCAGGGGATGGAGAGGTGGGAGACGGCAGCGCTCGCCAGCAAAGCTGAGGGAATACCTGCAAGACAAAAGGTTAGTACTCCCTTCATTTCAGATTATAATCAGATTATAAGTTGTTTTAACTTTAGTTAAAATCAAATTGCTTTAAATTTGATTAAGTTTGTAAAAAAAAAAGTAATATTTTCGACCTAAAATAAATATATTATGGAAATATATTCAACTATTGATTTAATGAAACTGATTTGGTGTTGTAAATATTACTATATTTGTCTATAAACTTATTCAAACTTGAAGTAGTTTGATTTTGATCAAAGTCAAAAAAGACTTATAATCTGAAACGCGAGGAGTATTTCCTTTCCTTGTTCAACTTAATTTCTCGAGTTACAACAATGTAGTACTACTATACTAACCAGTATTACTATAACAACTAAGAAAAAGAACATTAGTATTACTATACTAAGAAAAAGAAAATGTTCAAGTAACTAAGAACACTACTTCAGCTAAGTTTGACTTTATAGAAAAACCGTAGTAATACCAAATTAGTTTTATTAAATCAAACATTAAATATATTTTGATACTATATTTGTTTTGTGTTCAAAATGTTGCTACATTTTTCTATAAAATTGCTTAAAGTTAAAAATGTTTGACTTAGAAAAACCAAAATGTCTTATAATATAGGGGGAGAATTAATGAGTTACAGTAACACAAAATTGTTTCCAACAATGACACTCTTCCATTGAATTTATCCTATTAGTTTTATTAGGTAGGTTTGATGAAGTTCAACCTTCTCCTGCTCGGGTTATTTGTTCTCTATTAGAGAATCATAATCTATTGATTAGTTGAACCAAACTCGATTTTACTACTATTCAACTCAGTCTTGCCGGTTGTACAAAATTTCCTTCCAGTAGCAGGTAGTAGCTAAAAAAACAGATCATATATGTAGTTAATTATTTTATTTGTTGCCGAGTTTGTTCATATATGTGGAACTATTACATTGTATAGGTACATTGTGATATTGGATGATATATGGTCTTCATCAGCATGGGAGAGCATCAAATGCGCATTTCCAGATAATAAAAAGGGTAGCAGGATCATAGTAACCACCAGAAACGAGGATGTCGCCAACACCTGCTGCTGCCGCCCCCAAGATCGCATCTACAAGATCCAACGCCTCTCAGATGCGGCATCGCGGGAGCTGTTCTTCAAGAGGATCTTTGGCATGGCGGATGCCGGAGCGCCAGACGACGATGAGCTGAAACAAGTTTCAGATTCCATCCTGAAGAAATGTGGAGGGCTGCCTCTAGCAATAGTGAGCATCGGTAGCCTCCTCGCAAGCAAGCCAAACAGGAGCAAAGAAGAGTGGCAGAAGGTTTGTGACAACTTGGGCTCTGAACTTGAGTCAAATCCTACTCTTGAAGGCACAAAGCAGGTGTTAACTCTGAGCTACAATGATCTGCCCTACCATCTGAAGGCATGCTTCTTGTATTTGAGTATCTTTCCTGAAAATCATGTGATCAAGAGGGGACCTTTGGTGAGAATGTGGATAGCTGAAGGTTTTGTCACCCAGAGGCATGGATTGAGCATGGAACAGGTCGGTGAAAGATACTTTGATGAGTTTGTGAGCAGGAGCATGGTTCATCTTGTCAGAATCGATTGGAGTGGCAAGGTGAGAAGCTGCAAGGTTCATGATATAATGCTTGAAGTCATCGTCTCCAAGTCACTTGAGGAAAACTTTGCATCCTTCTTCTGTGACAATGGAACCGAACTGGTTTCGCATGACAAAATCCGCCGCCTCTCCATCCGCAGCAGTAGCTACTCATCAGCTCAAAGAACAAGCAACAGTGTAGCTCATGTTCGCACCTTCAGAATGTCACCTTCAATTGACAATATCCCATTCTTCTTTCCACAATTGCGGTTGTTAAGAGTGCTGGACATGCAAGGCAGCCGTTGCATGAGTAACAAGAATTTGGACTGCATCTGCAGATTTTTCCAGCTCAAATACCTAAGCCTCAGAAACACCAGTGTGTCCATACTTCCGAGGTTAATTGGGAATCTGAATCACCTGGAGACACTGGATATAAGAGAGACACTTATCAAGAAGCTGCCTAGTAGTGCAGCTAACCTGACTTGCCTAAAGCATTTGTTAGCAGGGCACAAAGAGCAACTTACAAGGACATCCAGTGTGAAGTTTTTGAGGCCATCCTCAGGTCTAAAGATGAGCCATGGAGTGATCAGAAACATGGCAAAGCTGCAATCACTTGTCCATGTAGAGATAAAAGAACATCCATCAGTGTTCCAGGAGATCGCCTTGCTGCAAAATCTACGGAAGCTCAGTGTTCTCTTTTATGGTATAGAGGTAAACTGGAAGCCCTTTCTGGAGTTGTTGAATATGCTGAGTGGCTCTGTGCGATCACTCTCCATTGACATCTTCGACGCACAAGGAAACATCTCTATCTCATCACTGGAGATGCTTTCTTCCTTAGTGTCACCTCCCATTTTCATCACTAGCTTCAGCCTGACTGGCAAGCTTGGTAGTCTACCTCCTTGGGTAGCATCACTTAGAAGCGTCTCGAGGCTTACTCTTCGCAGGAGCCAACTCCGTGCTGATGCCATACATGTCCTTGGAGGCCTGCAAAATCTGCTCTGCCTGAAACTCTATCACAAATCATATGCTGATGATCGCCTCGTTTTTCCACAGGGAGGATTTGCCAGGGTCAAGCTTCTGATCGATGATAACCTGGTGAACCTTGAAAAGTTGCATTTCAATGAGGGATCGATGCCTAATCTTGAGAGGCTGACATTGTCATTCCTGAGAGAACCCAAGGATGGCATCTCAGGTCTGAACAATCTCCTGAAACTGAAGGAGGTAGAGTTCTTTGGCAACATCGTATCATCTGTGGTGAGCAAAGTGGTGTCATGTGTGAAGGATCATCCAAATCATCCGAGAGTTGTAGGTGACAAATGGAACATTGTGACGGTGTACAATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021869