BGIOSGA021878

From RiceWiki
Revision as of 13:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021878| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021878, complete gene.| tag = P0046E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021878

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021878, complete gene.

LocusTag

P0046E09.2

Ensembl Transcript ID

BGIOSGA021878-TA

Ensembl Protein ID

BGIOSGA021878-PA

Length

2848

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3383528..3386375

Sequence Coding Region

3385788..3386375,3384740..3385067),complement(3384429..3384634,3384252..3384314),complement(3383528..3383542

Genome Context

<gbrowseImage1> name=IndicaChromosome06:3383528..3386375 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:3383528..3386375 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCGCCTCCGCCGCCGCGTTCACGGACAACCCGGCGGCGACAGCCACGGTGGCGGCGCGACACGGCGTCGACGGCGGCGGCAGCAGGGTGGTCGTGCCGCTGTTCCTGGTCACCGTGTCCCTGTTCTTCGTCACATACCAGCTCTTCGGCGTGGCCGCGGCGGCCGGCGCCATGGTGCTCGACGTCTGCGCCGTCGCCCTCGCCGCGCTCAATGTCACGGTCACCCGCGCGCGCCGCTTCCCCTTCCTGCGCCTGTCGCTCGGCGGGGAGGAAGGCCATGGTGGTGGTGGTGGCGCCGGCGGTGGTGGCGTGGCGCCGGCGGCGGCCGGGATGGACGCGGCGGCGATCATGGCGCTCCCGGCGGCCTTCGGGTACAAGCGGGAGCAGACGGCGGCGGCGGCGGGGGGATGGGCGCAGTGCTCGATATGCCTCGGCCTGGCGCGCGTCGGCGAGGCCGTGCGGCGGCTGCCGTCGTGCGGGCACCTGTTCCACGCCGGCTGCGTCGACGAGTGGCTGCGCGCGCACGCGACGTGCCCGCTGTGCCGCGCCGCCGTGTGCGCCGCCGGGCCGGAGCCGGAGCTGCCCGATGACAATGAGGTGGATTCATGGGTGAAGAAAGAATCTGAATGGGAGGAAGCAGGAGATGGAGAGGAAGACGATTATTCAGACGAAACCGAATATGATGATGATGATGATGAATCTTCAGATGAAGACAACGATTACTTCTCAATGGAAAATCGGGATGTCCGCTTCGCTTCGGAGGAGAAGTGGGAGAGCCAAATCATGGAACAGATGAAATTCTCTGTCTCCACTGCTGATCCATTTGATATCAGGACGATTTGGAAGGGGTCTCTGCACGTCGACGGGCCGTGCCAATCTCTCGATCCAAACCTCTTATCTATGAACAATTTCATGCCTCAGTTACCACTGAGAATGAAGAAGAAGAATAATGAGGAGCCTTGCCGTCGAGCCATCCAGGTGTTTGGTCTGACTGTATCTTCTCCTGACAATGTTGTTCAGGAGATCTATGGTATGTTTGCATTCAGAGATATACGAAACAGCCAAGAACGCAATTTCATCTTTGAATACCCAAGAGACAGACCATTTACACTTAAGCCGGGTTCTGATAAGGTGCAACCCCTGATTCAGCCTCCTCGCGGCATTTACGCAATAGGGCCAGTGGTTCGTATATGTTAA</cdnaseq>

Protein Sequence

<aaseq>MLASAAAFTDNPAATATVAARHGVDGGGSRVVVPLFLVTVSLFFVTYQLFGVAAAAGAMVLDVCAVALAALNVTVTRARRFPFLRLSLGGEEGHGGGGGAGGGGVAPAAAGMDAAAIMALPAAFGYKREQTAAAAGGWAQCSICLGLARVGEAVRRLPSCGHLFHAGCVDEWLRAHATCPLCRAAVCAAGPEPELPDDNEVDSWVKKESEWEEAGDGEEDDYSDETEYDDDDDESSDEDNDYFSMENRDVRFASEEKWESQIMEQMKFSVSTADPFDIRTIWKGSLHVDGPCQSLDPNLLSMNNFMPQLPLRMKKKNNEEPCRRAIQVFGLTVSSPDNVVQEIYGMFAFRDIRNSQERNFIFEYPRDRPFTLKPGSDKVQPLIQPPRGIYAIGPVVRIC</aaseq>

Gene Sequence

<dnaseqindica>1..588#1309..1636#1742..1947#2062..2124#2834..2848#ATGCTCGCCTCCGCCGCCGCGTTCACGGACAACCCGGCGGCGACAGCCACGGTGGCGGCGCGACACGGCGTCGACGGCGGCGGCAGCAGGGTGGTCGTGCCGCTGTTCCTGGTCACCGTGTCCCTGTTCTTCGTCACATACCAGCTCTTCGGCGTGGCCGCGGCGGCCGGCGCCATGGTGCTCGACGTCTGCGCCGTCGCCCTCGCCGCGCTCAATGTCACGGTCACCCGCGCGCGCCGCTTCCCCTTCCTGCGCCTGTCGCTCGGCGGGGAGGAAGGCCATGGTGGTGGTGGTGGCGCCGGCGGTGGTGGCGTGGCGCCGGCGGCGGCCGGGATGGACGCGGCGGCGATCATGGCGCTCCCGGCGGCCTTCGGGTACAAGCGGGAGCAGACGGCGGCGGCGGCGGGGGGATGGGCGCAGTGCTCGATATGCCTCGGCCTGGCGCGCGTCGGCGAGGCCGTGCGGCGGCTGCCGTCGTGCGGGCACCTGTTCCACGCCGGCTGCGTCGACGAGTGGCTGCGCGCGCACGCGACGTGCCCGCTGTGCCGCGCCGCCGTGTGCGCCGCCGGGCCGGAGCCGGAGCTGCCCGTGTGACCGTCAGCCGCGGTGATTGTTCTCATTGTTAGGTCGATCATGCTGTAGAGAAAGTATAACAGTAGAGCTTTTTTCTTCCATTTTATTAGTGTTGGTGATTGGTGATGATTTTATCTCAAATCAAGGTAGCCTTCCTGTTCTTCTATCGTCCTCAGTGACATCTGTAAATTCCGTCCAAATTATGTCAGTGCAGTTAAAGTACTCTTAATAGCTACTCCCCGTTTTATATTATAAGTCATTTTAACTATAGTTAAATTACTTAAACTACTACAAGTTTGTTCAAGTTTGTAAATAAATACAGTAATATTTACAACATCAAATTAGTTTCACTAATCTATAATTGAATATATATTTTAATAATATATTTGTCTTGGAGTGAAAATGTTACTGTTTTTTTTTACAACTCAAACGATTATAATATGAAGCAGATGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCACGGCTCTTCTCGATCACCTCAACCCAGTTGAGAGATCACCTCGAGATCATCGAGCGAGCCTGATCGATTCGAGATCAAGATCATGACGCGCGGTGGCAGAGGAGGTTAGTTATTGCCTTCAATTTCAGTTTCGCTACATGTTCCTCACCTTCCCTGGATCTCTTGACAGTATCATGATCTTGGGGACTAATTTGGTTTTTTTCTCTTTTTTTTCTGTTCGATAGAGGATGACAATGAGGTGGATTCATGGGTGAAGAAAGAATCTGAATGGGAGGAAGCAGGAGATGGAGAGGAAGACGATTATTCAGACGAAACCGAATATGATGATGATGATGATGAATCTTCAGATGAAGACAACGATTACTTCTCAATGGAAAATCGGGATGTCCGCTTCGCTTCGGAGGAGAAGTGGGAGAGCCAAATCATGGAACAGATGAAATTCTCTGTCTCCACTGCTGATCCATTTGATATCAGGACGATTTGGAAGGGGTCTCTGCACGTCGACGGGCCGTGCCAATCTCTCGATCCAAACCTCTTATCTATGAACAATTTCAGTAAGTTCATCGTTTCACATACCAATCTTTTTCAAGAAAAGAAAAAAATATTTAACTTTATATGTTCTTGAACTTTACCATATTTACTGGTTATTTCTGCTGCAGTGCCTCAGTTACCACTGAGAATGAAGAAGAAGAATAATGAGGAGCCTTGCCGTCGAGCCATCCAGGTGTTTGGTCTGACTGTATCTTCTCCTGACAATGTTGTTCAGGAGATCTATGGTATGTTTGCATTCAGAGATATACGAAACAGCCAAGAACGCAATTTCATCTTTGAATACCCAAGAGACAGACCATTTACACTTAAGCCGGTGAGCACTTTATCAACTCTTCTTTTTTTATGCAATCGTTTTAATTAGTTTATTCCTTAAGCATTCAAGTTTTTATCTCACAGGTGTAACTCTATATCATACATATATATGCAGGGTTCTGATAAGGTGCAACCCCTGATTCAGCCTCCTCGCGGCATTTACGCAATAGGGCCAGTGGTAATGGAGTATCACCTAATGATCAAAGGTCAAGAAGAACAAGAAGATAGAGTATTGGTAGATGGTTACTCCATCTACTGTCCATCTTTCTACAAAGAACGTTCAAGGTTCCACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACGTCATATATTGTGCAAGGAGGTAGTAAGTCTTAAATACGTAAAAATTACAATATATGACTAACATATTTGGAGAAACCAAAATATGAAATAAGTCTAATATTTTTGGAAGGAGGGAGTAGATTCTAGTGTCCACGAATATGGCTTGGTTCTTGCGTCTAAGCCGGCTTTAAGTTTACAGCCCGTTTCTCCTCTCTCTCCTCTCTTCTCTCCTACACTTCAGCATTTAGTCAGCTTATAGCCTACTATTATACTTGCTCTAAGGCTGTGTTACCTTCAAACTTCCAACTTTTCTGTCATATCAAATGTTTGGACACATGCATGGAATATTAAATGTGGATGAAAAAACCAATTGCATAGTTTACATGTAAATTGCAAGACGAATCTTTTGAGCCTAATTGCGCCATGATTTGACAATGTAGTGCTACAGTAAATATTTGCTAATGATGGATTAATTAGGCTTAATAGATTCGCCTCGCAGTTTACTGGTGAAATCTGTAATTTGTTTTGTTATTAATCTACGTTTAATACTTCATATAGGTTCGTATATGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021878