BGIOSGA021888

From RiceWiki
Revision as of 13:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021888| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021888, complete gene.| tag = P0529C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021888

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021888, complete gene.

LocusTag

P0529C07.45

Ensembl Transcript ID

BGIOSGA021888-TA

Ensembl Protein ID

BGIOSGA021888-PA

Length

3019

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3308413..3311431

Sequence Coding Region

3310802..3311431,3308698..3309186),complement(3308413..3308469

Genome Context

<gbrowseImage1> name=IndicaChromosome06:3308413..3311431 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:3308413..3311431 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGCCAGCCGCTGTCCATGAAGGGACCGCATGCATGGCACCTGCAGGCCTGCAGGGCGCCGGTATTCGCGGGAACTCGAGCTTGGAAGCAGCGGTCGTAGCCGAGGTCTCATCCGCGATCCAGAAGCTGTTGGTGTGGGTGTACAACACGCAGGGGAGATGGCCCAGGATAGCCGAGTACAACATGGAAGACCTCAACAGCAAGGTCCGTGAGCTCGTCAGGGTCATGGCACACGTCGGCTCCACCATGAGCGAGGCCTGGAGCAACGGGCGGCCGCCTATCCACGAGGCGGATATGTGGATCTGGAGAGGGATCAGGCTCAGGGACCGCGCCATCGATGTGCAGTCGAGGTTCGACGAGCTCGTCCGCAACGCCCCCTGCCTTTCCATCTGCAACACGCCTCAGTACCTGAGAAAGAGATGCCTGCTCAACTTCGAGGCGGTGGTGTGCCTCAACCGCATCACGGGTCACCTCGTTCGCGGGTCTCAAGAAAACTATGCGTCGGGCAGCGTGGAGCGCGTGTCGCGGCCGCCCAAGGACGATCACGAGTTCGCCTCGCTGTCCAAGTCGTCTCCTCAGGACCATAACTGGGCCTTTCCGGCGGTTTGCCAGTTCCTGGACAAGCCAAGCTCCACGGTCGCCCAAGAACCTGCGGTGACCGGGCGGACGCCGGTGCACGCGGCGGACAGCTCCGGACTCGCCCAGCAACAAGAGGAGGCGGTGGCGACGGCAGCTGGGAAGGTGCAGCTGGGAGTGTTCACGGAGGTCCCGGCCATCTCGTCCCAACGCCGCGAGAAGCTCGCCGTGATGGTACGCGTGAAGGCGCCGGCGTACACCAAGCAGACGAGGGCGCCACTGGACCTCGTCATGGTGCTGGACATCGGTGGCAGGATGAGGGAGCTGGAGCAGCTGAAGCAGGGCGCCAAGTTCATCATCCACAACCTCACGCAGCAGGACCGCCTCTCCATCGTCACCTTCGGCCCGAGGGCAGACCGGCTCTCCGAGCTCACTCCCATGACGGAACAAGACAAGAGGTCGTCCAACGACGCGGTTCAAGCCTTGGAGGCTAGCGGTGGTGTCAAAATAGGCGCAGGCTTGAATGTGGCATACCAGGGTGCTATTGAAGTCACTGCAACCACTAGGCTACATGTCCTTTTCGCTCCTAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAPPAAVHEGTACMAPAGLQGAGIRGNSSLEAAVVAEVSSAIQKLLVWVYNTQGRWPRIAEYNMEDLNSKVRELVRVMAHVGSTMSEAWSNGRPPIHEADMWIWRGIRLRDRAIDVQSRFDELVRNAPCLSICNTPQYLRKRCLLNFEAVVCLNRITGHLVRGSQENYASGSVERVSRPPKDDHEFASLSKSSPQDHNWAFPAVCQFLDKPSSTVAQEPAVTGRTPVHAADSSGLAQQQEEAVATAAGKVQLGVFTEVPAISSQRREKLAVMVRVKAPAYTKQTRAPLDLVMVLDIGGRMRELEQLKQGAKFIIHNLTQQDRLSIVTFGPRADRLSELTPMTEQDKRSSNDAVQALEASGGVKIGAGLNVAYQGAIEVTATTRLHVLFAPS</aaseq>

Gene Sequence

<dnaseqindica>1..630#2246..2734#2963..3019#ATGGCGCCGCCAGCCGCTGTCCATGAAGGGACCGCATGCATGGCACCTGCAGGCCTGCAGGGCGCCGGTATTCGCGGGAACTCGAGCTTGGAAGCAGCGGTCGTAGCCGAGGTCTCATCCGCGATCCAGAAGCTGTTGGTGTGGGTGTACAACACGCAGGGGAGATGGCCCAGGATAGCCGAGTACAACATGGAAGACCTCAACAGCAAGGTCCGTGAGCTCGTCAGGGTCATGGCACACGTCGGCTCCACCATGAGCGAGGCCTGGAGCAACGGGCGGCCGCCTATCCACGAGGCGGATATGTGGATCTGGAGAGGGATCAGGCTCAGGGACCGCGCCATCGATGTGCAGTCGAGGTTCGACGAGCTCGTCCGCAACGCCCCCTGCCTTTCCATCTGCAACACGCCTCAGTACCTGAGAAAGAGATGCCTGCTCAACTTCGAGGCGGTGGTGTGCCTCAACCGCATCACGGGTCACCTCGTTCGCGGGTCTCAAGAAAACTATGCGTCGGGCAGCGTGGAGCGCGTGTCGCGGCCGCCCAAGGACGATCACGAGTTCGCCTCGCTGTCCAAGTCGTCTCCTCAGGACCATAACTGGGCCTTTCCGGCGGTTTGCCAGTTCCTGGACAAGGTACGCATATACCTGCATACTCCCTCGGTAAAAAAAAAAAAAAAAAAAAAAAACAAACCCTGGATTTACGTGTCTAACTTTGACTGTCCGTCTTATATGAATTTTTTTTATAATTTGTATTTTTATTGGTGTTAGATGATAAAACATGATTAATACTTTGTGCGTGACTTTTTTTTAATTTTTTTTCATATTTTTTTCAAATAAGACGGACGGTCAAACATTTGGCACGGAAACCAGGGTTTGTCTTTTTTTGAGACGGAGAGAGTACGTCTATATATGTATACATAAAAGTAAATGCTATTTCAATTTTTTTTTGTTATTATACGGTTTAGTTAGGGTAAAATTCACTGTGAAAATTTGCTTCGATATTTTTTTTAGAAAATTATAAGCTGCAATTAGGAGTTTGTATTTCATCTAAGTTAGCATACAAGTTCCTTTTTTAAAGAGCTTTCTTATATGATTTCTTTTATATTTCCAAAAGCAAATGAGTTTAAAATTCAAATCAAACACGGATTTGTATTTCTAAAAGTGAACGAGCTTAAAAAACCGACTCAAACACAGATGACATATCAAAATACCGATAAAAATATCTTCAATTTTTATAATAGTAGAGATAGATATGTAAACCGACAACAAACGTGTTTTAGCTTCTTCATTTCTCATCTAGATTAATTTATTAACATACATATGAATTTGGACACAAATATGAAGCATGCACGTACTCCCTCCGTCCCTAAATATTTGATGCCGTTGACTTTTTTAAACATATATGACCGTTTGTCTTATTCAAAATCTTTTGTGAAATATGTAAAACTATATGTATACATAAAAGTATATTTAATAAATTAGTTCAATTTTTTAATAAAACGAGGTCAAACATGTTTAAAAAAGTCAACGGCGTCAGATATTCAGGGACGGAGGTAGTACAACATTTAGGGCAGTCCCAACCCATAGTGTCCATAAGTAGTGTCTATGGTGCCATGTCAATAAGACATCACAATAGAAACTACACTCCACAACCCATGATTTCTTAAAGTGGGCCATTAATAAATACACCGTCTATCTTCTCTGCCAATCATATTTATTCTTCATCTATTATGAAGACACTATTATCTCCCAATGCAAAACCTGATAGTGTCTAGTGCATAGGTTCTCGTGTTGAAGCTGTGTCTTGCATGAGACCCAGTTTCTTCCTCTCTTCACTCTCTCTCTTAATTAATATAGTGCCACATAAGCTAAAAGTTCTACATGGCAATGTAGTTAATGCCATAGACACCATCCTAGATGGAGGGTTGGAACTGCCCTTATGGATGTATGAGCCTATTCATCCAAGTCTAAAACGTCATATAATGTGACTTCCATTTTAAAATATAGCCATTTCTACATACATATATATACTTTTAAAATATATCTGGATATCGGATGCTTATATATAGCTACTCCCCCTGTCTCATATTTTAAGACTTTCTAGCATTGCTCTTATTCATATAGTTGTTAATGAATCTAGAAATATATAATTATGGATAGTTCTAAAAAGTGTGAAACGGAGGAAGTAGCTAGTGTGCTGTGCGTATGTTTTATCCGATGATCTATGTTAATAATTATAATGTTCCAGCCAAGCTCCACGGTCGCCCAAGAACCTGCGGTGACCGGGCGGACGCCGGTGCACGCGGCGGACAGCTCCGGACTCGCCCAGCAACAAGAGGAGGCGGTGGCGACGGCAGCTGGGAAGGTGCAGCTGGGAGTGTTCACGGAGGTCCCGGCCATCTCGTCCCAACGCCGCGAGAAGCTCGCCGTGATGGTACGCGTGAAGGCGCCGGCGTACACCAAGCAGACGAGGGCGCCACTGGACCTCGTCATGGTGCTGGACATCGGTGGCAGGATGAGGGAGCTGGAGCAGCTGAAGCAGGGCGCCAAGTTCATCATCCACAACCTCACGCAGCAGGACCGCCTCTCCATCGTCACCTTCGGCCCGAGGGCAGACCGGCTCTCCGAGCTCACTCCCATGACGGAACAAGACAAGAGGTCGTCCAACGACGCGGTTCAAGCCTTGGAGGCTAGCGGTGGTGTCAAAATAGGCGCAGGCTTGAATGTGGCATACCAGGTACGTTACGTACTCCGCTTTTTTTTTTTTTTTTAGCGAGAAGTATTTTTTATCCGGACTTCTACATCTAATCAGATATATGCAGTCTTTTTAAATTAGAAATTTAGCTTATCATACAAGGACTTAGCCATTTTTAAATTAGAAACTTAGCTATCATACAGGGAACTTAGCCCTCAAATAAATCAATCTAAAATTCGCTCGTATGAAGATTTAAATTTATTATCTTAGGGTGCTATTGAAGTCACTGCAACCACTAGGCTACATGTCCTTTTCGCTCCTAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021888