BGIOSGA021909

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Revision as of 13:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021909| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021909, complete gene.| tag = OsI_216...")
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Gene Name

BGIOSGA021909

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021909, complete gene.

LocusTag

OsI_21667

Ensembl Transcript ID

BGIOSGA021909-TA

Ensembl Protein ID

BGIOSGA021909-PA

Length

5474

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2930117..2935590

Sequence Coding Region

2935567..2935590,2935297..2935427),complement(2935091..2935213,2934405..2934474),complement(2934057..2934178
,2933692..2933831),complement(2932721..2933315,2932349..2932547),complement(2930554..2930891
,2930117..2930456

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2930117..2935590 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2930117..2935590 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGGAAGTAAATAAGGAGGAGGATATCCGTTTAGGGTTGCATCGATCTGATTACATGCTGGATTCTGGAACCAATTCACTTCTCCAAATTGAGCTCAACACTATTTCATCATCATTTCCTGGTCTTAGTTCCCTTGTAAGCGAACTTCACAGGACCCTACTTAATCGACATGGCAAGGTTTTAGGCCTTGATTCCAAAAGGATTCCTCAGAACTGGGCTGCCACCCAATTTGCTGAAGCATTGAGCATGGCTTGGACTGAGTTTAATAACAAGAGAGACGGACAGACAGTTTCTGTTGTGTATTTCAGAGCTGGATATTCTCCAAATGATTATCCTTCTGAAGCGGAATGGAGAGCCAGGCTTTTGATGGAGCAGTCATCTGCTATAAAGTGCCCTTCAATATCCTACCATTTAGTGGGAACGAAAAAGATCCAGCAAGAACTAGCAAAACCTAATATTCTTGAAAGATTCCTTAACAACAAGGAGGACATTGCCAAGCTACGGAAATGCTTTGCAGGCTTATGGAGTTTAGATAATGAAGAAATAGTGAAGACTGCAATAGAAAAACCTGACTTGTTTGTCCTGAAACCTCAGCGAGAAGGCGGAGAATCGCCGGCGGTGCATGCCGACGAGGTGACGACACCCATGGCAATCGGCGCTGGCGGCGACCGCCTGTCCGCCCTCCCCGACGACCTCCTCCTCCGCGTCCTCCACTTCGCGAACGCCGTGGAGGCCGCGTCCACCAGCTTGCTCTCGCGGCGGTTCGGCGCGCTCTGGCGCTCATCCGGCGCGGTCAACCTCGCCGCGCGCGTCCCCGGCGCCGGCGGCAGAGACGCCTTCGTCCGTGCCGCTGATGCGGCGCTCGCCGCCGCCGGCCGCGTCGTCACGAGGCTCACCTTACACGTCGACGACGGAGATCACAGCGGCTACTGCACCTCCATGTACAACTTGCTCAGAGATCACGACGTGGTCGACGCCGTGGTCTCCCACCCGGCGGCGCGCCGCGTCGAGGAGCTCCGCGTCGCCGTCGCCGTGCACCCTTTCGGGCACGACAAGATTAATACCATGATCAGTAGCGGCAGCGTCAGGATCTACGACATCAAGCTCGCCTCCCTTCCGTCGAAAACCCTCCGCGTGCTGGACCTCACCAACTGCCGCAACCTCACGCCGGCCTCCGCCGCCGCCGCCGCCACCGCCTTCCCCGACATGGTGTTCTTGAGAGTGTTCCCCAACATCGAGCACCTCGAGCTCGACGGAGCTTACGACACCTGGAACAAGACGGCGGCGGCGGTCGCGAGCATCCTCCATTGCTGCCCGGTGCTTCGCGAGCTCAAGCTGAATCTCGTCGGCACCTCCAAGAACTCCAAACGAGTGCAGCATTTCTTTCGAAGAAATTCTCAGCTGGGAAGGTCCTCCACCACCCGCCTCCGCTTCCCGGCTGCCACCGCGCTCACGCTGATCAACTGCCTCACCAACGGCGGCATGAGCGGCAGCGTTATCGACGCGCCGAGGCTACGATCCTTGACATACAAGGGGGCGGCGAGGTCGCAGTTCGAGCTAACCTCGCCGGCGCCGGACATGAAGATGGTGCACCTCCACTTCAACCACTACTTCCATCAACGTGATTACCTTCGTTTCATCCATAACTTCACCAAGGTCAAGGTGCTCAAGCTAAAGGCGGAGCATGGCTGTCCATGGCGTATTCTTCCCCAACATTGCTCGCCTCGAGCTCGACGGAGCACGGTGTCACCTGACTATTTCAAGAACTCGAAGCAAGTTCAGCATTTCTTTCAAAGAAAATCCCAGCTTGATTTCGACAGGTCGATCGATGATTTCATGCGAAACAGCATATCAAAGCGTGGTGATCATCGCCATAACGGCGATGAGGTTTCTGGATTCATCCCTGGATTGACTGCCTGCTCCTTCACCTGCTTGCAGAACAATCTGAGAAGAGTTAGCCTGCAATTCAGGTTGGATGAGAATTCTGAGAATTTTGGAGTTCGTCTGGTAAAATTCTTCGCTGAAAACGCAATGGTTCTCGAAGAATTGCGCGTATTGACAGTGGAAACTGAAACCTGA</cdnaseq>

Protein Sequence

<aaseq>MMEVNKEEDIRLGLHRSDYMLDSGTNSLLQIELNTISSSFPGLSSLVSELHRTLLNRHGKVLGLDSKRIPQNWAATQFAEALSMAWTEFNNKRDGQTVSVVYFRAGYSPNDYPSEAEWRARLLMEQSSAIKCPSISYHLVGTKKIQQELAKPNILERFLNNKEDIAKLRKCFAGLWSLDNEEIVKTAIEKPDLFVLKPQREGGESPAVHADEVTTPMAIGAGGDRLSALPDDLLLRVLHFANAVEAASTSLLSRRFGALWRSSGAVNLAARVPGAGGRDAFVRAADAALAAAGRVVTRLTLHVDDGDHSGYCTSMYNLLRDHDVVDAVVSHPAARRVEELRVAVAVHPFGHDKINTMISSGSVRIYDIKLASLPSKTLRVLDLTNCRNLTPASAAAAATAFPDMVFLRVFPNIEHLELDGAYDTWNKTAAAVASILHCCPVLRELKLNLVGTSKNSKRVQHFFRRNSQLGRSSTTRLRFPAATALTLINCLTNGGMSGSVIDAPRLRSLTYKGAARSQFELTSPAPDMKMVHLHFNHYFHQRDYLRFIHNFTKVKVLKLKAEHGCPWRILPQHCSPRARRSTVSPDYFKNSKQVQHFFQRKSQLDFDRSIDDFMRNSISKRGDHRHNGDEVSGFIPGLTACSFTCLQNNLRRVSLQFRLDENSENFGVRLVKFFAENAMVLEELRVLTVETET</aaseq>

Gene Sequence

<dnaseqindica>1..24#164..294#378..500#1117..1186#1413..1534#1760..1899#2276..2870#3044..3242#4700..5037#5135..5474#ATGATGGAAGTAAATAAGGAGGAGGTAATTAACTATATTTGTGTTTAATTTCTGATTCTGAAGTATGATACATACATCTTTTAAATTATCCTTTTTATTTCGTGTGTTGTGTGTGGCACATGTCAGTTCATAAGGTACTGAAAAGTTATTAATAAACCATCAGGATATCCGTTTAGGGTTGCATCGATCTGATTACATGCTGGATTCTGGAACCAATTCACTTCTCCAAATTGAGCTCAACACTATTTCATCATCATTTCCTGGTCTTAGTTCCCTTGTAAGCGAACTTCACAGGTCAGGTTAATTTCTACAGATTTGCCTTGTTTTAATCTTCTAATGTGTTAACCTGATTAGTAGTATTGTTTTGCTAACTACAGGACCCTACTTAATCGACATGGCAAGGTTTTAGGCCTTGATTCCAAAAGGATTCCTCAGAACTGGGCTGCCACCCAATTTGCTGAAGCATTGAGCATGGCTTGGACTGAGTTTAATAACAAGAGGTCTAAACTTTACCTATGCACTATGAGTTTGTGTTAATTCAGTTATTATAAAACACAAGCTTCAACTAACACGTGTTTCTTCCATTTGATTGCCAGTGCTGTAATTATGATGGTTGTTCAACCTGAAGAAAGAAACATGTATGACCAATACTGGCTTATCAATCATTTGAAGGAATCATATCCTTTGATTATTTGTTTCTTTTTGTGCTGTAATGTTGAGCTGTTAACTTCTGAAATATTGAAACTTCAATCATTTCCTATTCATTTTCTAATGTGTTGATTTTTGTTCATATGATTTAAGTTTTCCTTTTCTCGGGGATGTGATTTAAGTATTGACATGTTGCCTGACTTTTATTAGGAAAATAATTCTTGGGCTTGGTAAGCACTTGTTTTTAATACTTATGTGATTACCACAGTTAAAATCATGGAAATAGGTATTCCTTAACTATCTGTTACGCATGGTGTGAAGACCATTAGGAAAACATTGGCACAGGTAGAGGCTGAAGGGCAGGTTCTTCCAGATGGAACGCTTGTGGTGTATGTGTCCTGTGTAGGCATGAAGGCAGGGTTACTGTTCTCTATTAGCATTCTAATATTTAAATGTGTGAAAATGCAGAGACGGACAGACAGTTTCTGTTGTGTATTTCAGAGCTGGATATTCTCCAAATGATTATCCTTCTGAAGCGGTATGCGCTACTGCATTTGTGTGGTGAATACCCTTTTTCATTAGAGAGGAGATTCCTATTTTGGATTCCTATTTTTGTATTAATCACGAAGTTCCTTGGAAGAGGTTTTGCTTCAGAAGCATTTGTATTTTTGTTTTCTGGTTCATGTTTCATAGCTTCCTGTTTCTTCAGAGAAAAAGGAATGCTTATTCACATTTCACCATGGTGTCTTTTCTTTATATTGTAGGAATGGAGAGCCAGGCTTTTGATGGAGCAGTCATCTGCTATAAAGTGCCCTTCAATATCCTACCATTTAGTGGGAACGAAAAAGATCCAGCAAGAACTAGCAAAACCTAATATTCTTGAAAGGTAATGGTCATTTTTATTACCATTGGATGATTATTATTTTCTAATATCCCTGTGGTGCTCTGCATATTACTTTTTAGATCTATTGAATTTGTTACTCACTTTGGTCAATATGCATCTTTTTGAATGAACAGTATATCATTTTTTTTATTTCTAGCGCTATACTTCTAGAGTTCAGTTTGTTTAGCCATGTGTTACTGACCACTATCTGATTCTATTTGTCTGCAGATTCCTTAACAACAAGGAGGACATTGCCAAGCTACGGAAATGCTTTGCAGGCTTATGGAGTTTAGATAATGAAGAAATAGTGAAGACTGCAATAGAAAAACCTGACTTGTTTGTCCTGAAACCTCAGCGAGAAGGCGGAGGTCTGTTTTCATGGCACTTAAGAACACCCTTTTGTTCACTATAAATCTTCTGGAAACGTGCTGTTACTAATATTTGTTTTCAGGAAACAACATATATGGTTATGATCTGCGAGAAACGCTGGTCAGACTCCAGAAGGAGCAGGGAGAGGCACTTGCAGCCTACATACTGATGCAAAGGATTTTTCCAAGAGCTTCTCTTACTCATCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGAACGTAGACGCGGACGATTTATTCTGGCCGATTCGCCGCCACAATACTTACCCGATCGATACATGTCATCCTCGACAGCAAGATCGATCTGATCTCCGTCGCCGCGTCGTGTAGAATCGCCGGCGGTGCATGCCGACGAGGTGACGACACCCATGGCAATCGGCGCTGGCGGCGACCGCCTGTCCGCCCTCCCCGACGACCTCCTCCTCCGCGTCCTCCACTTCGCGAACGCCGTGGAGGCCGCGTCCACCAGCTTGCTCTCGCGGCGGTTCGGCGCGCTCTGGCGCTCATCCGGCGCGGTCAACCTCGCCGCGCGCGTCCCCGGCGCCGGCGGCAGAGACGCCTTCGTCCGTGCCGCTGATGCGGCGCTCGCCGCCGCCGGCCGCGTCGTCACGAGGCTCACCTTACACGTCGACGACGGAGATCACAGCGGCTACTGCACCTCCATGTACAACTTGCTCAGAGATCACGACGTGGTCGACGCCGTGGTCTCCCACCCGGCGGCGCGCCGCGTCGAGGAGCTCCGCGTCGCCGTCGCCGTGCACCCTTTCGGGCACGACAAGATTAATACCATGATCAGTAGCGGCAGCGTCAGGATCTACGACATCAAGCTCGCCTCCCTTCCGTCGAAAACCCTCCGCGTGCTGGACCTCACCAACTGCCGCAACCTCACGCCGGCCTCCGCCGCCGCCGCCGCCACCGCCTTCCCGTGGCTGGACACGCTACGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATGGCGATCAAGGTGCTCAAGCTGAAGGCGCCGGCGTCGCGCCACCTCAGCGACATGGTGTTCTTGAGAGTGTTCCCCAACATCGAGCACCTCGAGCTCGACGGAGCTTACGACACCTGGAACAAGACGGCGGCGGCGGTCGCGAGCATCCTCCATTGCTGCCCGGTGCTTCGCGAGCTCAAGCTGAATCTCGTCGGCACCTCCAAGAACTCCAAACGAGTGCAGCATTTCTTTCGAAGAAATTCTCAGGTTGGTTTTTGACTCGTTTATCGATCATTTCTTGCGAGATCATTGCGATGACGACGATGGATTCCTCCCTGGATTGAGTTACTACTCATTCAGCATGACTTGAAGAACAGCTTGAGGAGGAGTTATCACCGCGCTTCTCAATTTGGCCAATGATAACTCCAAGTCTTTTGGAGTTCGTCTGGTCAAATTCTTCGCTGAAAACGCAGTTGTTCTAGAGGAATTACGCATATTGACAGTGGGAAATTAACAGAAAGCTGAGCTAGGACAATAATCTGGATGTTGAAAGGATGGATGACGCTAGCACAAATTAAAGAAAAACACACTGGAGTCTCCTAAGAGCCTGCCTACAACGATGCATTACCGAGGCAACTCTTTGGGCAGAGAACTTAACGGAAGATGATCGATTTGTAATCTCTGTTTGGAAACAGATCTTCTCCTCCCCCTTACAATGTATCAATCTTTTGTAATGAACTTCTTACCTCTAATTGCAATGACAAATTCAGGTGGGGAATCTCTCCCCCGGTGATTTAGTAAAAAAAAAAAAAACACTGGAGTCTCCTGGCTAGCTCCACAAGACGGTGGGCTAGATGTCCTAGTTCGAAACTTCACCCCTTCTAATTATTTGATATTAGGTCCTTCCTAATATTCGTATCTTTTTTTTCTAGCACAAATTAATCATCCAAGGCTAGTCGTCGTTGTCGGAGCCAGGTAATATTTTTGTAGGGTATTGAGTACATCTGGATTTGTGTGTGCCTCACACAACGTGTGAAAGGTGAATGATCAAGATACGTATGGATTGCATGTTTGCTCACTGAAGTTGGATTAATGTAGTGTTCTCATGTGGATTTGATGGCTAATTTACGGTTATTGTTGCGGTTATATTTTTAGCATCTTGTGGAAAATGGAAACACGTGGTTTTGTAAAAAAATAAAATAAAGTGCAGTGTTTGGGAATTCAAATTAAATATGAGTAAACCTATGACAATCAACCTTTTGACTGTCATACTAGCTCCATTTTTTGAAAAAAAAGGTGCAGTGTTTAGTAATTCAAATTAAATATCAGTAAACTTGTGGCAATCAACTTGTGGCAAGGCGTGTGTGGTTTAAATATAAACTTGTTTGCAATTTTTTTTCCTGCTCTATCAATATAAACTTCACACCGTGTGATGTGAGTTGTTTTTTTTTAAAAAAAAACAAACCCATCACCCTCATAATTTTGTCTTAAAAAAATATTTTGAGGATGTCTCTCTCTTCAAATCTCGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGGGGGAGACGCGCGGCTGGACACGCACGGGAACATCGACGATCTCCACCGCATCATCGACGCCGCGCCGGAGCTCGCCGCCGTGCGCCTCGAGTTCGTCCATCTCATATCCAACATCCGCGATGTCCACTTCCTGGTGCAGCTGGGAAGGTCCTCCACCACCCGCCTCCGCTTCCCGGCTGCCACCGCGCTCACGCTGATCAACTGCCTCACCAACGGCGGCATGAGCGGCAGCGTTATCGACGCGCCGAGGCTACGATCCTTGACATACAAGGGGGCGGCGAGGTCGCAGTTCGAGCTAACCTCGCCGGCGCCGGACATGAAGATGGTGCACCTCCACTTCAACCACTACTTCCATCAACGTGATTACCTTCGTTTCATCCATAACTTCACCAAGGTCAAGGTGCTCAAGCTAAAGGCGGAGCATGGCTGTCCATGGCGTATTCTTCCCCAACATTGCTCGCCTCGAGCTCGACGGAGGTTTCAACCGTTGGAGCAAGACGGCGAAGGCCGCCGCGATCGCGAGCATGCTCCATTGCTGCCCAGTGCTCTGCGACCTCAACCTGAATCTCATCAGCACGGTGTCACCTGACTATTTCAAGAACTCGAAGCAAGTTCAGCATTTCTTTCAAAGAAAATCCCAGCTTGATTTCGACAGGTCGATCGATGATTTCATGCGAAACAGCATATCAAAGCGTGGTGATCATCGCCATAACGGCGATGAGGTTTCTGGATTCATCCCTGGATTGACTGCCTGCTCCTTCACCTGCTTGCAGAACAATCTGAGAAGAGTTAGCCTGCAATTCAGGTTGGATGAGAATTCTGAGAATTTTGGAGTTCGTCTGGTAAAATTCTTCGCTGAAAACGCAATGGTTCTCGAAGAATTGCGCGTATTGACAGTGGAAACTGAAACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021909

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021909&oldid=44434"