BGIOSGA021912

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Revision as of 13:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021912| Description = BGIOSGA021912| Definition = Oryza sativa Indica Group BGIOSGA021912, complete gene.| tag = | tid = BGIOSGA021912-TA|...")
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Gene Name

BGIOSGA021912

Description

BGIOSGA021912

Definition

Oryza sativa Indica Group BGIOSGA021912, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA021912-TA

Ensembl Protein ID

BGIOSGA021912-PA

Length

963

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2887962..2888924

Sequence Coding Region

2888423..2888924,2887962..2888284

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2887962..2888924 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2887962..2888924 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAAGCTCTCCATGGTGACCTCTCTCCTCTGCGCCATCACTGTCGCGGTTCTTGCCGTGGCGGTGGTCAGCGGCGAGGCGGCTGTGGTGGAGCACACCTTCGTGGTGCACGAGATGAACGCGACGCACCTGTGCAACACGACCAAGATCTACGTGGTGAACGGACAGTTCCCGGGCCCCACGGTGGACGTGACGGAGGGCGACACGGTGGTTGTCCACGTCATCAACAAGCTGCCATTTGGGCTTACCATCCATTGGCATGGTGTCCGCCAGATGAGGAGCTGCTGGGCTGATGGGGCTGGCTTTGTCACCGAGTGTCCTATCCCACCAGGAAACGAGCACACCTACCGCTTCAACGTCACCGGCCAGGTCGGCACGCTGTGGTGGCACGCCCACGTCACCTGCCTCCGGGCCACCATCAATGGTGCCTTCATCGTTCGCCCTCGTGATGGGAAGTACCCCTTCCCGACACCGGCCAAGGACGTGCCGATCATCATAGGAGAATGGTGGGAGCTTGACCTCATCGAGCTAGATAGAAGGATGATGGATGGCAACTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTGTCGCCTCCGTCGACTACCGCCTTGCGCCTAAGCACCGCCTCCCTGCCGCGTTTGAGGACGCCGCCGACGCGGTTCGGACGGTGTGCTCGTACGCCACGGGCTCGCCCGGCTGCAGGCCCCTGTTCCTGATGGGCAGCCACGCCGGCGCGAGCATCGCGTTCCACGCGGCGCTGGCGGGGTGGACGAGGGCATGGAGCTACGTGAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MEKLSMVTSLLCAITVAVLAVAVVSGEAAVVEHTFVVHEMNATHLCNTTKIYVVNGQFPGPTVDVTEGDTVVVHVINKLPFGLTIHWHGVRQMRSCWADGAGFVTECPIPPGNEHTYRFNVTGQVGTLWWHAHVTCLRATINGAFIVRPRDGKYPFPTPAKDVPIIIGEWWELDLIELDRRMMDGNFXXXXXXXXXXXXXXXXXVVASVDYRLAPKHRLPAAFEDAADAVRTVCSYATGSPGCRPLFLMGSHAGASIAFHAALAGWTRAWSYVS</aaseq>

Gene Sequence

<dnaseqindica>1..502#641..963#ATGGAGAAGCTCTCCATGGTGACCTCTCTCCTCTGCGCCATCACTGTCGCGGTTCTTGCCGTGGCGGTGGTCAGCGGCGAGGCGGCTGTGGTGGAGCACACCTTCGTGGTGCACGAGATGAACGCGACGCACCTGTGCAACACGACCAAGATCTACGTGGTGAACGGACAGTTCCCGGGCCCCACGGTGGACGTGACGGAGGGCGACACGGTGGTTGTCCACGTCATCAACAAGCTGCCATTTGGGCTTACCATCCATTGGCATGGTGTCCGCCAGATGAGGAGCTGCTGGGCTGATGGGGCTGGCTTTGTCACCGAGTGTCCTATCCCACCAGGAAACGAGCACACCTACCGCTTCAACGTCACCGGCCAGGTCGGCACGCTGTGGTGGCACGCCCACGTCACCTGCCTCCGGGCCACCATCAATGGTGCCTTCATCGTTCGCCCTCGTGATGGGAAGTACCCCTTCCCGACACCGGCCAAGGACGTGCCGATCATCATAGGTAATGAACAGTCCAGATCGATCGTTGAGCTATGCACCGGTTGATCTTGACCGTTGATTAATTGAATTTGTTTGGTTGGAATAATTTTGGTACTTACGAATCCACTTACTTAAGAAATATGTATCGTCCCATTTGTAGGAGAATGGTGGGAGCTTGACCTCATCGAGCTAGATAGAAGGATGATGGATGGCAACTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTGTCGCCTCCGTCGACTACCGCCTTGCGCCTAAGCACCGCCTCCCTGCCGCGTTTGAGGACGCCGCCGACGCGGTTCGGACGGTGTGCTCGTACGCCACGGGCTCGCCCGGCTGCAGGCCCCTGTTCCTGATGGGCAGCCACGCCGGCGCGAGCATCGCGTTCCACGCGGCGCTGGCGGGGTGGACGAGGGCATGGAGCTACGTGAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021912