BGIOSGA021927

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Revision as of 13:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021927| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021927, complete gene.| tag = P0036F1...")
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Gene Name

BGIOSGA021927

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021927, complete gene.

LocusTag

P0036F10.11

Ensembl Transcript ID

BGIOSGA021927-TA

Ensembl Protein ID

BGIOSGA021927-PA

Length

2878

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2723473..2726350

Sequence Coding Region

2726091..2726350,2725642..2725724),complement(2725453..2725550,2725223..2725296),complement(2724704..2724754
,2723473..2724100

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2723473..2726350 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2723473..2726350 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGACGTACGGTTTGGTGAAGGATGAGCTGCTTCACGGCATCGGAGGAGGGCAGGGGCGCCTGTACTGCGAGGTTAAGCCGACAGCAGCGCCGGCGGTGATCACAGCTGCCGGTGGCGGCGCTAAGAGCGTGAAGAGAAGGAAGAGAGAGCCATCGGCGGCGGCGATGTCGGCTGTGACAGTGGCCGGCAATGGCAAAGAGGCCGGCGGTAGCAATGCGGCTAACAAGAGAAGCTCAAGGTTTAGGGGTGTGAGCAGGCACCGTTGGACAGGCAGATTTGAGGCACACCTGTGGGACAAAGGGACATGGAACCCAACGCAGAAGAAGAAAGGGAAACAAGTTTATCTCGGGGCTTACAACGAGGAAGATGCGGCAGCGAGAGCTTACGATCTGGCGGCGCTCAAGTACTGGGGACCTACCACCTACACAAACTTCCCTGTCGCTGACTATGAAAAAGAGCTGAAACTGATGCAGGGTGTATCCAAGGAGGAGTACCTAGCCTCAATAAGAAGGAAGAGCAATGGCTTCTCTCGTGGAGTTTCCAAGTACAGAGGCGTTGCACGGCACCACCACAACGGCAGGTGGGAGGCTCGGATCGGCAGGGTGTTCGGCAACAAGTACCTCTACCTGGGCACCTACTCCACCCAGGAGGAGGCCGCCCGCGCCTACGACATCGCCGCCATCGAGTACCGCGGCATCAACGCCGTCACCAACTTCGATCTCAGCACCTACATCCGCTGGCTCAAGCCCCCCTCCTCCTCCTCCGCCGCCGGCACGCCCCACCACCACGGCGGTGGCATGGTCGTCGGCGCCGACCGCGTGCTCGCCCCGGCGCAGAGCTACCCGATCAGCGCCGCCGCCGACGACGACGTGGCCGGCTGCTGGCGGCCGTTGCCGTCGCCGTCGTCGTCGACGACCACGGCGCTCAGCCTGCTGCTCCGGTCGTCGATGTTCCAGGAGCTCGTGGCGCGGCAGCCCGTTGTGGAAGGCGACGACGGACAGTTGGCGGTGGTGTCGGGCGACGACGCCGACGCCGACGCCGACGTGAAGGAGCCGCCGCCGGAGAGCGAGTACGGCGAAGTGTTCAAGAGCGACGAGGCGGCGGCGGCGGCGGCGTACGGGTGCTCCATGTACGAGCTGGACGACAGCTTCACCCTCATCGATGACTCGGTGTGGAACTGCTTGATCTGA</cdnaseq>

Protein Sequence

<aaseq>METYGLVKDELLHGIGGGQGRLYCEVKPTAAPAVITAAGGGAKSVKRRKREPSAAAMSAVTVAGNGKEAGGSNAANKRSSRFRGVSRHRWTGRFEAHLWDKGTWNPTQKKKGKQVYLGAYNEEDAAARAYDLAALKYWGPTTYTNFPVADYEKELKLMQGVSKEEYLASIRRKSNGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPPSSSSAAGTPHHHGGGMVVGADRVLAPAQSYPISAAADDDVAGCWRPLPSPSSSTTTALSLLLRSSMFQELVARQPVVEGDDGQLAVVSGDDADADADVKEPPPESEYGEVFKSDEAAAAAAYGCSMYELDDSFTLIDDSVWNCLI</aaseq>

Gene Sequence

<dnaseqindica>1..260#627..709#801..898#1055..1128#1597..1647#2251..2878#ATGGAGACGTACGGTTTGGTGAAGGATGAGCTGCTTCACGGCATCGGAGGAGGGCAGGGGCGCCTGTACTGCGAGGTTAAGCCGACAGCAGCGCCGGCGGTGATCACAGCTGCCGGTGGCGGCGCTAAGAGCGTGAAGAGAAGGAAGAGAGAGCCATCGGCGGCGGCGATGTCGGCTGTGACAGTGGCCGGCAATGGCAAAGAGGCCGGCGGTAGCAATGCGGCTAACAAGAGAAGCTCAAGGTTTAGGGGTGTGAGCAGGTACAGTAACTGAAACTCTGAAAGTAACTGAAAAAAAAAATCAGCACTTGATAGTCTCTGTGTCCTGACTGTATATGTCGTTCTTCACTATCATAAATGTTTTGATGTTTATTTGATGTTTAGATAAGTTTCACTTGATACAGCAACTGAATCTTGTCCTAAAACGTCAAATACTTTTTAACGAAGTTAGTACACCTTTTGCACTCAAAGATTATTCACTATTGTGTTACACAGATTAGCTTGTAGTAGGACAAAAAAAAACAAAAATCAGATTTGATTTGCATGCATATACTATATGTATGTTGATCTGAATATCTGTGATCATGTTTACTGTTGAGTAATATATATATATTGCCATAAGAGCAGGCACCGTTGGACAGGCAGATTTGAGGCACACCTGTGGGACAAAGGGACATGGAACCCAACGCAGAAGAAGAAAGGGAAACAAGGTTATGATCACTGAATATACATATATATGCTTGTTGCAAACTTGACCAGAATGCTGAATATTTGGCTTGTACTACATATAAATTCATGCAGTTTATCTCGGGGCTTACAACGAGGAAGATGCGGCAGCGAGAGCTTACGATCTGGCGGCGCTCAAGTACTGGGGACCTACCACCTACACAAACTTCCCTGTATGTACAAAAATCTTATGCTCATCTGTTCAGATTTTAGCTGTACTAGTAGTGATTTTGATGATTATTCCAAATTTCCAATCAATGTGTTGTGCTATGCAAAGGGACAAAGAAAATGATCGGTGATTCTGTTGTTATTATGCCTGGATGCAACAGGTCGCTGACTATGAAAAAGAGCTGAAACTGATGCAGGGTGTATCCAAGGAGGAGTACCTAGCCTCAATAAGAAGGTGAGCATGTACCTGCACCTGGCTAACTTGTTATTGCAGGAATGCCATCCTTTTCAATTTTTTCAAAAGATCACACTAGTTTCTGAGTTGTATGTCTCTCAAAAAAATTATTAGTCCCTCCCAAAAAAAATATTTCCTTCAATCATAAATATTTGACGCTGAAGAACAAGATTTGGTTAACTTTTAAAAGTTTGACAATTAACGGTTTCTCGAATTATTAACTTAAAAATAAAAATAGTATGGGTAGATTTACCTTAAATATAATACTATAAACTTATTAGATTTTATAAACTTTTTAATATAAAATTGATGATCCGAGTTTTAAAATTTTGACTGAATCTTAATAGTAAAAATAAAATATTTGAATTTAGTAAAAAAAATATTAAATATTTGTGAACTGAACGAGTAAGTTGTATCGCTGCAGTTTTTTAGTAATTCCATTGTATAATTGCCTCCGCATGTATGCAGGAAGAGCAATGGCTTCTCTCGTGGAGTTTCCAAGTACAGAGGCGTTGCACGGTAAGTGCAACTTTTTTTTTTTTTTTGTGCTTTGGAAGATTCTGTTTAGAGGTGCTTAAGATTACGAGGATTTAGAGAACCTGAAAAATCAAACTTTTCAGAATCTTGACGAAAACTATGTTGTTTGAAAAGTTTTTAATTTTGGAGTCAGAAGCTCTATAAATACTTTATCCATTCATAATATAAATCGTTTTTGACTGTTATAAAGTCAAATCTTTTAAAAGTTTAATCAAGCTTATAGATAAATATCACAATAATAGCACTCAATTAGTTTTATTAGATATAATATTGAATATATTTTGATATTTTTTATTTTATGTTAAAAACATTACTATATTTTTTATAAATTCCATCAAAATTAAAAAAGCTTAATGTAGAAAAATGAAAATAACTTGTACTCCCTCCGTTTCATAATGTAAGTTATTTTAGTATTTTTCACATTTATATTGATGTTAATCAATCTAGACATATTGATGTTAATAAATCTATATGAATGTAGAAAAAGCTACTTAGAATGATTTATATTGTGAAACGGAGGAAGTATTATGAAAACGGATGGAGGTGGTAAGTCATAACCGACACTTCCCATGCATCGATGAGCAGGCACCACCACAACGGCAGGTGGGAGGCTCGGATCGGCAGGGTGTTCGGCAACAAGTACCTCTACCTGGGCACCTACTCCACCCAGGAGGAGGCCGCCCGCGCCTACGACATCGCCGCCATCGAGTACCGCGGCATCAACGCCGTCACCAACTTCGATCTCAGCACCTACATCCGCTGGCTCAAGCCCCCCTCCTCCTCCTCCGCCGCCGGCACGCCCCACCACCACGGCGGTGGCATGGTCGTCGGCGCCGACCGCGTGCTCGCCCCGGCGCAGAGCTACCCGATCAGCGCCGCCGCCGACGACGACGTGGCCGGCTGCTGGCGGCCGTTGCCGTCGCCGTCGTCGTCGACGACCACGGCGCTCAGCCTGCTGCTCCGGTCGTCGATGTTCCAGGAGCTCGTGGCGCGGCAGCCCGTTGTGGAAGGCGACGACGGACAGTTGGCGGTGGTGTCGGGCGACGACGCCGACGCCGACGCCGACGTGAAGGAGCCGCCGCCGGAGAGCGAGTACGGCGAAGTGTTCAAGAGCGACGAGGCGGCGGCGGCGGCGGCGTACGGGTGCTCCATGTACGAGCTGGACGACAGCTTCACCCTCATCGATGACTCGGTGTGGAACTGCTTGATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021927