BGIOSGA021963

From RiceWiki
Revision as of 13:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021963| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021963, complete gene.| tag = P0535G0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021963

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021963, complete gene.

LocusTag

P0535G04.4

Ensembl Transcript ID

BGIOSGA021963-TA

Ensembl Protein ID

BGIOSGA021963-PA

Length

2674

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2318062..2320735

Sequence Coding Region

2320223..2320735,2319999..2320139),complement(2319801..2319905,2319099..2319198),complement(2318602..2318694
,2318062..2318327

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2318062..2320735 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2318062..2320735 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCATCCACCTCCGCGCCCACGCCTTCGCGGCGAGCCCTCTGCGCGGCCTCTCCGCCTCCACCGCCGCCGTCTCCCCGTCGGCCGCGGCCGACGCCCTCCGCTCCCTCCTCGACGCGGGGGCCGGGGCAGCCGACGCCGCGCACCCGCACCCGCACCCGCACCTCTCCAAGATCCTCCCCTTCCGCCGCGGCCGCCCCCTCGCGCGCTCCTACGACTCTCCTCCTCCCCCCGCTGCCGCGGCCGCGGCGCCGCCGCCTCCTCCCGCCTGGCGCCTCGCGTGGCTCCCGCCCGCGCGCGTCCCCGACGTGCCCTCGGACGCCTTCGTGTTCCTGGGCGCGCACGGCGAGGAGGAGGGGAAGGAGGCCGCGGCGTACTGGGCCGTCGATGTGAGCGAGCGCGACGGGGAGGGCGCCGGGGATGGGTCGGCGTTTGTGGATTTGAGGACGCTCATGGTGGCCACGGACTGGAGGGACAAGGACGCCATGGGAGACCTCGCCATCGCGGGCCACGCTCGGGCGCTGCTAGAATGGCATAGCACAGCAAAATTCTGCGGAGCTTGTGGATCAAGGGCTGTTCCTGCTGAAGCCGGAAGACGGAAGCAGTGCAGCAATGAATCCTGCAAGAAGAGGATATACCCTCGAGTTGATCCCGTTGTGATTATGTTGGTCATAGATAAGGAAAACGATCGTGCGCTCTTAAGCCGCCAGTCGAGATTTGTGCCTCGAATGTGGAGCTGTCTTGCTGGTTTTATAGAGCCAGGAGAAAGCTTGGAAGAGGCAGTGAGAAGGGAAACGTGGGAAGAGACTGGTATTCAAGTTGGGGAAGTCATTTATCACAGTTCTCAACCGTGGCCTGTTGGGCCGAGTACTATGCCATGCCAACTGATGGTGGGATTCTTTGCTTACGCTAAATCATTGGAGATACATGTTGACAAGAAAGAGCTTGAAGATGCCCAATGGCACAGCCGTGAGGATGTCAAGAAAGCACTAACATTTGCAGAATACGAGAAAGCTCAGAGAACAAATGCGCTCAAGGTCAATCAAATATGCAAGGGTGTTGAGAAAAGGCAGAGCATCTCTGCTGACCTCAAAATCGAAAGTGAGGAGCCTGCTCCAATGTTCGTTCCTGGGCCCTATGCGATTGCTCACCACCTCATATCATCATGGGCTTTTGAAGGAGCACCAAAGGCACCTAGCTCCTTCTCCAACCTATGA</cdnaseq>

Protein Sequence

<aaseq>MSIHLRAHAFAASPLRGLSASTAAVSPSAAADALRSLLDAGAGAADAAHPHPHPHLSKILPFRRGRPLARSYDSPPPPAAAAAAPPPPPAWRLAWLPPARVPDVPSDAFVFLGAHGEEEGKEAAAYWAVDVSERDGEGAGDGSAFVDLRTLMVATDWRDKDAMGDLAIAGHARALLEWHSTAKFCGACGSRAVPAEAGRRKQCSNESCKKRIYPRVDPVVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIQVGEVIYHSSQPWPVGPSTMPCQLMVGFFAYAKSLEIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRTNALKVNQICKGVEKRQSISADLKIESEEPAPMFVPGPYAIAHHLISSWAFEGAPKAPSSFSNL</aaseq>

Gene Sequence

<dnaseqindica>1..513#597..737#831..935#1538..1637#2042..2134#2409..2674#ATGTCCATCCACCTCCGCGCCCACGCCTTCGCGGCGAGCCCTCTGCGCGGCCTCTCCGCCTCCACCGCCGCCGTCTCCCCGTCGGCCGCGGCCGACGCCCTCCGCTCCCTCCTCGACGCGGGGGCCGGGGCAGCCGACGCCGCGCACCCGCACCCGCACCCGCACCTCTCCAAGATCCTCCCCTTCCGCCGCGGCCGCCCCCTCGCGCGCTCCTACGACTCTCCTCCTCCCCCCGCTGCCGCGGCCGCGGCGCCGCCGCCTCCTCCCGCCTGGCGCCTCGCGTGGCTCCCGCCCGCGCGCGTCCCCGACGTGCCCTCGGACGCCTTCGTGTTCCTGGGCGCGCACGGCGAGGAGGAGGGGAAGGAGGCCGCGGCGTACTGGGCCGTCGATGTGAGCGAGCGCGACGGGGAGGGCGCCGGGGATGGGTCGGCGTTTGTGGATTTGAGGACGCTCATGGTGGCCACGGACTGGAGGGACAAGGACGCCATGGGAGACCTCGCCATCGCGGGCCACGTGCGTGGCGATTATTTTGTTGTTATCAGAGACATTCGAATTACTACATTTTTTGTGGTTGATTGGATTTCTGATTCGAGCAGGCTCGGGCGCTGCTAGAATGGCATAGCACAGCAAAATTCTGCGGAGCTTGTGGATCAAGGGCTGTTCCTGCTGAAGCCGGAAGACGGAAGCAGTGCAGCAATGAATCCTGCAAGAAGAGGATATACCCTCGAGTTGATCCCGTATGATTTGTGCTCAATTCCTGACCTATCTTGCAGTTGGAGATGGCACCTGTTGAATTTGACGTTTTGTTATCCCTATTTGGTGTATTGCAGGTTGTGATTATGTTGGTCATAGATAAGGAAAACGATCGTGCGCTCTTAAGCCGCCAGTCGAGATTTGTGCCTCGAATGTGGAGCTGTCTTGCTGGTTTTATAGAGGTGCAAATTAGCTCTTAGTTTTCATGATTTCTTATGTTTAATGTTCAGATCTTTTCTTCATAATAATATGTGCTTAGTTCCATTCCTTTCACTTGTAATTTTCTTATGCTGGTTTTGGTTTGGATGAAACAGAAGGATGCTATAGATAACTTGGTTGTATTACACCCATTGTTACTGCATACTGCACAATCCTGGTTAGATCTTATTTGTGAGTTGGTGGGATGGTTAGATCTTATTTGTTAGTTGGTGGGAGGACCGGAGGAGTGTATGTACACACCCACCACACAAGTTTGGATCCTCTAGGGCTAACTTGGATTCATCTTCCCCCGTGGGTATCCTCATTTTATTTATTTTTTTAAAAAAAGAGTTACCATATCCTCATTAGCCATGCTTGTAATTTGTAGGAGATTATTTAGAGCACTTCACTATCCTAACTATGATGAATTCATTCCAAATACTGAAAAGTAACTTGTTTTCTTGTTTAAGTTTTGTCCTATGCTTATGCTAACTTCAACTTTCTGTGGTACTAGCAAGTTCATTTCATTATCATCTTGCCGTGCACTGAAAGAAGCTTACACATGCTGCAACTGTTCTTTTTGTAGCCAGGAGAAAGCTTGGAAGAGGCAGTGAGAAGGGAAACGTGGGAAGAGACTGGTATTCAAGTTGGGGAAGTCATTTATCACAGTTCTCAACCGTGGCCTGGTAATGAATTGTTCTTACCATATATCTTTCGAATGAAAAACACAGGAAAGGATAACACTAGAAGATAAGAAATATGTTTTAACCTTTCTAATTATCGTATCAAAATACAGAAGTACTTATAATGAAAGATACTAGGCAAGAACTATATCAAATTAAAGTAATAAGAAGAAATAGGTAGAGGACTTGGGCGGTGGTGGTGGTGTACATGCATACCAAGAGACATGTATTAGGGCTCCCTTTGGCATTAGAGTGTATTCTCAAAACAAAATTATTTGTGCTTTGGGATATATTATGAGCTGTTATCGTCTTTTTCTTGAGTTGTAGAGAAAAGTCTTAATAGAATCAGTGACAATCTCCCTAACCCACTCTGATAGTATCCATGTTGCTTCCGATGCTTTTTTCAGTTGGGCCGAGTACTATGCCATGCCAACTGATGGTGGGATTCTTTGCTTACGCTAAATCATTGGAGATACATGTTGACAAGAAAGAGCTTGAAGGTTTGTCAGTATGAAATGTTATTTTTTTTCCTACTCTTTTTTGCAACTGATTGGCCTGGTCCATCCATATAATCCTACGTTTCAGTCGGTCTTCTGTTATTTTTCTTATGCAATCTTACAAGAATATTTAGATACTAACTGAGTAAAACTTATCTAATTGTTAAATTGGTGATCTGTAATACATCGAAGATACTTTTCTACAATGAACTTCATAATAGTTCTGCGCAGACCTTTTAGTTCTCATCTCTCGAATGCCATTCTTTTACCAATGTAGATGCCCAATGGCACAGCCGTGAGGATGTCAAGAAAGCACTAACATTTGCAGAATACGAGAAAGCTCAGAGAACAAATGCGCTCAAGGTCAATCAAATATGCAAGGGTGTTGAGAAAAGGCAGAGCATCTCTGCTGACCTCAAAATCGAAAGTGAGGAGCCTGCTCCAATGTTCGTTCCTGGGCCCTATGCGATTGCTCACCACCTCATATCATCATGGGCTTTTGAAGGAGCACCAAAGGCACCTAGCTCCTTCTCCAACCTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021963