BGIOSGA021967

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Revision as of 13:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021967| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021967, complete gene.| tag = OsI_215...")
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Gene Name

BGIOSGA021967

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021967, complete gene.

LocusTag

OsI_21568

Ensembl Transcript ID

BGIOSGA021967-TA

Ensembl Protein ID

BGIOSGA021967-PA

Length

4417

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2262793..2267209

Sequence Coding Region

2267158..2267209,2265788..2266251),complement(2265629..2265733,2265058..2265333),complement(2262793..2264868

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2262793..2267209 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2262793..2267209 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGGAGGAGGAGGTGGTGGTAGCGCCGCCGCGCGGCCAGCACTCGGCAAGATCACTGATGCTGCGTGCATCTCCAGTGAGAGGGACGCTCTGCTTGCTTTCAAAGCCGGTTTCGCTGATCCTGCTGGAGGGGCGCTGCGTTTCTGGCAAGGCCAAGACTGCTGCGCATGGAGCGGGGTGTCCTGCAGCAAAAAGATCGGCAGTGTTGTCAGCCTGGATATCGGCCATTATGATCTCACTTTCAGAGGTGAAATCAACTCATCTCTGGCTGTTCTGACACATCTAGTGTACCTTAACCTGAGTGGAAATGATTTCGGTGGGGTGGCCATCCCAGATTTCATAGGCTCCTTCGAGAAGCTGAGGTATCTTGATCTTTCGCATGCTGGTTTTGGAGGGACAGTTCCTCCTCGGCTTGGTAATTTGTCAATGCTCAGCCACCTTGATTTGAGCTCACCAAGTCATACAGTTACTGTCAAAAGCTTCAACTGGGTGTCTCGCCTCACTTCACTGGCTACAAATACGCTTCCTTTGCTTAAAGTCCTCTGCTTGAATCATGCGTTTCTTCCTGCCACAGACTTGAATGCTCTTTCTCATACCAACTTCACAGCCATTAGGTTGAAGATTCTTGACCTTGCACTCAATAATCTAACCGGGAGTCTGTCTGGTTGGGTCAGGCACATAGCAAGTGTAACTACTCTTGATCTTAGTGAGAACTCATTATCCGGACGAGTATCAGATGATATTGGCAAGTTATCAAACTTAACCTACTTAGATCTTTCAGCCAATTCATTTCAAGGCACACTGTCCGAACTCCACTTTGCTAATCTGTCCAGGCTGGATATGCTAATTTTAGAGTCCATTTATGTGAAGATTGTCACTGAAGCAGACTGGGCTACAAATACGCTTCCTTTGCTTAAAGTCCTCTGCTTGAATCATGCGTTTCTTCCTGCCACAGACTTGAATGCTCTTTCTCATACCAACTTCACAGCCATTAGGGTACTTGATCTGAAGAGTAACAACTTCAGTTCACGAATGCCAGATTGGATTTCAAAGCTAAGTTCTCTTGCATATTTGGACTTGTCTAGCTGTGAGCTTTCAGGCTCACTTCCCAGGAACCTTGGGAACTTGACATCCCTCAGTTTTTTTCAATTACGAGCGAACAACCTTGAAGGTGAAATACCTGGATCCATGAGTAGGTTGTGCAACCTACGCCACATTGATTTATCTGGAAACCATTTCTCAGGAGATATTACAAGACTTGCTAATACCTTGTTCCCCTGCATGAACCAGTTGAAGATTCTTGACCTTGCACTCAATAATCTAACCGGGAGTCTGTCTGGTTGGGTCAGGCACATAGCAAGTGTAACTACTCTTGATCTTAGTGAGAACTCATTATCCGGACGAGTATCAGATGATATTGGCAAGTTATCAAACTTAACCTACTTAGATCTTTCAGCCAATTCATTTCAAGGCACACTGTCCGAACTCCACTTTGCTAATCTGTCCAGGCTGGATATGCTAATTTTAGAGTCCATTTATGTGAAGATTGTCACTGAAGCAGACTGGGTGCCACCATTCCAACTCCGAGTCCTAGTACTTTATGGATGTCAGGTAGGACCACACTTCCCAGCATGGCTGAAGTCACAAGCCAAAATTGAAATGATCGAGTTAAGCAGAGCACAGATCAAGAGCAAGTTACCTGATTGGCTCTGGAACTTCTCATCAACAATTAGTGCCTTGGATGTCTCAGGAAATATGATTAATGGAAAGTTGCCCAAAAGTTTAAAGCACATGAAAGCGCTGGAGTTACTTGACATGAGTTCGAACCAACTGGAGGGATGCATTCCTGATCTGCCATCTAGTGTGAAAGTATTGGATCTGTCAAGTAACCACTTATATGGACCATTGCCACAAAGACTGGGTGCCAAAGAAATATATTATCTATCACTCAAAGACAACTTCCTCAGTGGAAGCATCCCTACGTACCTATGTGAGATGGTTTGGATGGAACAGGTTCTTCTATCACTAAACAACTTCTCAGGTGTACTCCCAAATTGCTGGAGGAAAGGTTCAGCGCTGAGAGTTATAGATTTCTCAAACAATAACATTCACGGAGAAATATCTTCAACCATGGGTCATCTAACTTCCCTTGGATCATTGTTACTCCACAGGAACAAGTTATCTGGTCCACTCCCCACCTCACTGAAGCTATGCAACAGATTAATCTTTCTTGATCTTTCAGAAAATAATTTGTCCGGAACCATACCAACCTGGATAGGTGACAGCCTGCAGTCTCTGATTCTCCTCAGTTTAAGGTCCAACAACTTTTCTGGTAAAATTCCCGAGCTACTATCTCAGCTTCACGCTCTTCAAATTTTAGATATTGCTGATAACAATCTATCAGGCCCTGTACCCAAATCCTTGGGAAATTTAGCAGCCATGCAGTTAGGCAGGCACATGATACAACAGCAATTTAGCACCATTTCGGACATCCATTTCATGGTTTATGGTGCAGGTGGTGCAGTCTTGTATCGGTTGTATGCATACTTATACTTGAATAGTCTACTTGCTGGCAAGCTTCAATATAATGGAACTGCCTTCTATATTGATCTCTCTGGTAACCAATTAGCAGGGGAGATTCCTATTGAAATTGGATTTCTATCTGGACTAACGGGTTTAAATTTGTCAGGAAATCACATAAGAGGGAGCATTCCAGAGGAGTTGGGAAACTTAAGAAGTTTAGAGGTGCTTGATCTCTCCAGGAATGATCTGTCAGGCCCAATTCCACAGTGCTTCCTGTCATTGTCTGGTTTGAGCCATCTGAATTTATCATACAATGACCTTTCAGGAGCTATACCATTTGGAAATGAACTTGCAACTTTTGCAGAAAGCACATACTTTGGTAATGCACATACAACTGTCAAGAAGCTGTTTGTACCACAAAAGGAAGCATCAACTAAACTTTGA</cdnaseq>

Protein Sequence

<aaseq>MAAGGGGGGSAAARPALGKITDAACISSERDALLAFKAGFADPAGGALRFWQGQDCCAWSGVSCSKKIGSVVSLDIGHYDLTFRGEINSSLAVLTHLVYLNLSGNDFGGVAIPDFIGSFEKLRYLDLSHAGFGGTVPPRLGNLSMLSHLDLSSPSHTVTVKSFNWVSRLTSLATNTLPLLKVLCLNHAFLPATDLNALSHTNFTAIRLKILDLALNNLTGSLSGWVRHIASVTTLDLSENSLSGRVSDDIGKLSNLTYLDLSANSFQGTLSELHFANLSRLDMLILESIYVKIVTEADWATNTLPLLKVLCLNHAFLPATDLNALSHTNFTAIRVLDLKSNNFSSRMPDWISKLSSLAYLDLSSCELSGSLPRNLGNLTSLSFFQLRANNLEGEIPGSMSRLCNLRHIDLSGNHFSGDITRLANTLFPCMNQLKILDLALNNLTGSLSGWVRHIASVTTLDLSENSLSGRVSDDIGKLSNLTYLDLSANSFQGTLSELHFANLSRLDMLILESIYVKIVTEADWVPPFQLRVLVLYGCQVGPHFPAWLKSQAKIEMIELSRAQIKSKLPDWLWNFSSTISALDVSGNMINGKLPKSLKHMKALELLDMSSNQLEGCIPDLPSSVKVLDLSSNHLYGPLPQRLGAKEIYYLSLKDNFLSGSIPTYLCEMVWMEQVLLSLNNFSGVLPNCWRKGSALRVIDFSNNNIHGEISSTMGHLTSLGSLLLHRNKLSGPLPTSLKLCNRLIFLDLSENNLSGTIPTWIGDSLQSLILLSLRSNNFSGKIPELLSQLHALQILDIADNNLSGPVPKSLGNLAAMQLGRHMIQQQFSTISDIHFMVYGAGGAVLYRLYAYLYLNSLLAGKLQYNGTAFYIDLSGNQLAGEIPIEIGFLSGLTGLNLSGNHIRGSIPEELGNLRSLEVLDLSRNDLSGPIPQCFLSLSGLSHLNLSYNDLSGAIPFGNELATFAESTYFGNAHTTVKKLFVPQKEASTKL</aaseq>

Gene Sequence

<dnaseqindica>1..52#959..1422#1477..1581#1877..2152#2342..4417#ATGGCGGCGGGAGGAGGAGGTGGTGGTAGCGCCGCCGCGCGGCCAGCACTCGGTGAGTGACCAACCAACCCGCCTTCCCCCCCCCCCCCGCCCCCTACCCCTCTTCCCCCGTTACCCGCGCTTCTCGTGCAGTCGTGCGCTCGATGTGGTTCCTGTTTCGCTTCACTGTGCTCGCATAGTCGCATCGAAGCGGACGCCTGGCTGCGCGCGTGCGCGATTTGGATCAACGCGGAAAGGTATATCGAATGAGAGAAGCTGAAAAAGCGAGAAATGACCTGGTTATTGTTACTGCAGATTGCGTCTGGTTTCCTGTGAAATTTTCTTCCCGCAAAACGTCAGGGTTTAACTTGGTAAAACTGGGAATAGAGGAAAGCTCCCTGTGCTGACTTTGAAACTATCGTCTTTAACTTGAAGCCTCTTTTAAGTTGAAGCCGCCGTTTAGATTGAGACTAACTATATTTATGGCGTCACAATTTCTTTTACCAAAAAAGAGACTGCAAATGAACATATATTTACATTGTGTAGTAATTTTGTTGTAACTTATAAAAATTACACTGTCAATTTCAGTACTGACATTGTAATTGTAAATTTTCGAGTACACACCATATAAGAGAAAGAGGGAATATCGATTGATTACCTACCTGATAAAGGAGATGTAAGAGATAGAAAACATATTTACATATAAGAAAAAAAAATGTAGCAATCACATAGGGAAAAAAATGACTGAAATCGAATCGAAACTGTGGCGCTATTTCTTTTTAGCAAAAATGCTTTAACTTACATCTTTTTATGCATATAAGGTAGGGCGACTTTAACTTACCTTTGCTCCAGGGAAACTAAAGCTTGCTCTAGTTGGAAGCTAACTTGAGCTGAATTAGCCAATTAGCCATCAGAGGAATGATGCAAGGGATAATGCTTGCAGCGTTGCTTGTTCTTTGCCAGTTGATCAAAAATGCAGGCAAGATCACTGATGCTGCGTGCATCTCCAGTGAGAGGGACGCTCTGCTTGCTTTCAAAGCCGGTTTCGCTGATCCTGCTGGAGGGGCGCTGCGTTTCTGGCAAGGCCAAGACTGCTGCGCATGGAGCGGGGTGTCCTGCAGCAAAAAGATCGGCAGTGTTGTCAGCCTGGATATCGGCCATTATGATCTCACTTTCAGAGGTGAAATCAACTCATCTCTGGCTGTTCTGACACATCTAGTGTACCTTAACCTGAGTGGAAATGATTTCGGTGGGGTGGCCATCCCAGATTTCATAGGCTCCTTCGAGAAGCTGAGGTATCTTGATCTTTCGCATGCTGGTTTTGGAGGGACAGTTCCTCCTCGGCTTGGTAATTTGTCAATGCTCAGCCACCTTGATTTGAGCTCACCAAGTCATACAGTTACTGTCAAAAGCTTCAACTGGGTGTCTCGCCTCACTTCACTGGTCTATCTAGACCTTAGTTGGTTGTATCTTGCTGCTTCCTCTGATTGGTTGCAGGCTACAAATACGCTTCCTTTGCTTAAAGTCCTCTGCTTGAATCATGCGTTTCTTCCTGCCACAGACTTGAATGCTCTTTCTCATACCAACTTCACAGCCATTAGGGTACTTGATCTGAAGAGTAACAACTTCAGTTCACGAATGCCAGATTGGATTTCAAAGCTAAGTTCTCTTGCATATTTGGACTTGTCTAGCTGTGAGCTTTCAGGCTCACTTCCCAGGAACCTTGGGAACTTGACATCCCTCAGTTTTTTTCAATTACGAGCGAACAACCTTGAAGCCTGAAATACCTGGATCCATGAGTAGGTTGTGCAACCTACGCCACATTGATTTATCTGGAAACCATTTCTCAGGAGATATTACAAGACTTGCTAATACCTTGTTCCCCTGCATGAACCAGTTGAAGATTCTTGACCTTGCACTCAATAATCTAACCGGGAGTCTGTCTGGTTGGGTCAGGCACATAGCAAGTGTAACTACTCTTGATCTTAGTGAGAACTCATTATCCGGACGAGTATCAGATGATATTGGCAAGTTATCAAACTTAACCTACTTAGATCTTTCAGCCAATTCATTTCAAGGCACACTGTCCGAACTCCACTTTGCTAATCTGTCCAGGCTGGATATGCTAATTTTAGAGTCCATTTATGTGAAGATTGTCACTGAAGCAGACTGGGTGCCACCATTCCAACTCCGAGTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCAAGTCATACAGTTACTGTCAAAAGCTTCAACTGGGTGTCTCGCCTCACTTCACTGGTCTATCTAGACCTTAGTTGGTTGTATCTTGCTGCTTCCTCTGATTGGTTGCAGGCTACAAATACGCTTCCTTTGCTTAAAGTCCTCTGCTTGAATCATGCGTTTCTTCCTGCCACAGACTTGAATGCTCTTTCTCATACCAACTTCACAGCCATTAGGGTACTTGATCTGAAGAGTAACAACTTCAGTTCACGAATGCCAGATTGGATTTCAAAGCTAAGTTCTCTTGCATATTTGGACTTGTCTAGCTGTGAGCTTTCAGGCTCACTTCCCAGGAACCTTGGGAACTTGACATCCCTCAGTTTTTTTCAATTACGAGCGAACAACCTTGAAGGTGAAATACCTGGATCCATGAGTAGGTTGTGCAACCTACGCCACATTGATTTATCTGGAAACCATTTCTCAGGAGATATTACAAGACTTGCTAATACCTTGTTCCCCTGCATGAACCAGTTGAAGATTCTTGACCTTGCACTCAATAATCTAACCGGGAGTCTGTCTGGTTGGGTCAGGCACATAGCAAGTGTAACTACTCTTGATCTTAGTGAGAACTCATTATCCGGACGAGTATCAGATGATATTGGCAAGTTATCAAACTTAACCTACTTAGATCTTTCAGCCAATTCATTTCAAGGCACACTGTCCGAACTCCACTTTGCTAATCTGTCCAGGCTGGATATGCTAATTTTAGAGTCCATTTATGTGAAGATTGTCACTGAAGCAGACTGGGTGCCACCATTCCAACTCCGAGTCCTAGTACTTTATGGATGTCAGGTAGGACCACACTTCCCAGCATGGCTGAAGTCACAAGCCAAAATTGAAATGATCGAGTTAAGCAGAGCACAGATCAAGAGCAAGTTACCTGATTGGCTCTGGAACTTCTCATCAACAATTAGTGCCTTGGATGTCTCAGGAAATATGATTAATGGAAAGTTGCCCAAAAGTTTAAAGCACATGAAAGCGCTGGAGTTACTTGACATGAGTTCGAACCAACTGGAGGGATGCATTCCTGATCTGCCATCTAGTGTGAAAGTATTGGATCTGTCAAGTAACCACTTATATGGACCATTGCCACAAAGACTGGGTGCCAAAGAAATATATTATCTATCACTCAAAGACAACTTCCTCAGTGGAAGCATCCCTACGTACCTATGTGAGATGGTTTGGATGGAACAGGTTCTTCTATCACTAAACAACTTCTCAGGTGTACTCCCAAATTGCTGGAGGAAAGGTTCAGCGCTGAGAGTTATAGATTTCTCAAACAATAACATTCACGGAGAAATATCTTCAACCATGGGTCATCTAACTTCCCTTGGATCATTGTTACTCCACAGGAACAAGTTATCTGGTCCACTCCCCACCTCACTGAAGCTATGCAACAGATTAATCTTTCTTGATCTTTCAGAAAATAATTTGTCCGGAACCATACCAACCTGGATAGGTGACAGCCTGCAGTCTCTGATTCTCCTCAGTTTAAGGTCCAACAACTTTTCTGGTAAAATTCCCGAGCTACTATCTCAGCTTCACGCTCTTCAAATTTTAGATATTGCTGATAACAATCTATCAGGCCCTGTACCCAAATCCTTGGGAAATTTAGCAGCCATGCAGTTAGGCAGGCACATGATACAACAGCAATTTAGCACCATTTCGGACATCCATTTCATGGTTTATGGTGCAGGTGGTGCAGTCTTGTATCGGTTGTATGCATACTTATACTTGAATAGTCTACTTGCTGGCAAGCTTCAATATAATGGAACTGCCTTCTATATTGATCTCTCTGGTAACCAATTAGCAGGGGAGATTCCTATTGAAATTGGATTTCTATCTGGACTAACGGGTTTAAATTTGTCAGGAAATCACATAAGAGGGAGCATTCCAGAGGAGTTGGGAAACTTAAGAAGTTTAGAGGTGCTTGATCTCTCCAGGAATGATCTGTCAGGCCCAATTCCACAGTGCTTCCTGTCATTGTCTGGTTTGAGCCATCTGAATTTATCATACAATGACCTTTCAGGAGCTATACCATTTGGAAATGAACTTGCAACTTTTGCAGAAAGCACATACTTTGGTAATGCACATACAACTGTCAAGAAGCTGTTTGTACCACAAAAGGAAGCATCAACTAAACTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021967