BGIOSGA021973

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Revision as of 13:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021973| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021973, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA021973

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021973, complete gene.

LocusTag

OSJNBA0041F13.21

Ensembl Transcript ID

BGIOSGA021973-TA

Ensembl Protein ID

BGIOSGA021973-PA

Length

4209

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2213871..2218079

Sequence Coding Region

2217989..2218079,2216394..2216494),complement(2214594..2215433,2214346..2214492),complement(2213871..2214251

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2213871..2218079 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2213871..2218079 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGATGCTGGATCTGATGCGCCTCATGTCCATCCAGCGCCAGCGGGACCAGGAGCGCCGCCGCCGCCAAGCCCAAGCTCCCCCCCGTGATGGATTGATTGCTTTACGGGCTAAAAGAAAGGGCTCACCCTGCCAACAAGACGGCGATTCTCAGGGTGCTGCTGACATAGAGATACCAAGCCTTCCAGAGGACATCTGGCGTCTTATACATTCCTTGATGCCAATGCGAGATGCTGCCCGAGCTGCCTGTGTGTCTCGTTCCTTTCTAAGTTTGTGGAGATGCCACCCCAACCTCAATTTCAGTAGTGAAGCATTTGGGTTGAACAAAAATGCATGTGGAAAGGAAGAATTGGCTGGACTTTTCTACAGCAAAGTCGACCACATTCTCAAAAGGCACTCAGGCATCGGCGTGAAAAAACTTAAGATTCAGATATATTCAGATTATAGTGGGAAAGGCTCTTCATATCTCAACAATTGGCTTCAGATTTCTGTTAAACCAGGGATTGAAGAACTCATAATTTCACTGACCCAGTTCCAGGCAAAGTACAATTTCCCATGCTCTCTTCTGTCGAATGGGAGTGGAGACTCAATCCAATATCTTCACCTTTCTAACTGTTCCTTCCACCCAACAGTCACACTTAGTGGCTTAAGAAGTCTGATGAGACTGTATCTTTGTTGTGTGCGTATTACGGAGAACGAGTTAGGCTGCCTTCTTTCCCATTCTCTTGCATTGGAGCAGTTGGAAATCAGGTACTGCGATAGGATAGTTTGCCTGAAGGTACCTTGCCTACTGCAGCGGCTCATCTCCCTGAAGGTGTTTGGGTGTGACAAGCTGAAACTGATAGAAAATGAAGCTCCTAATGTCTCCATTTTTGCATTTCAAGGGGACAAAACGGAACTGAAACTTGGAGAAACTTTGCAAATAAAGAGCCTATGCATGGTCCGCTCTGGTTATGTTTATCATGCTCGTGCTGAACTTCCATCCATCATGCCAAATCTTGAATCTCTTGCCATAAAGTCACGCAAAGAGACGGCCTTTGCACCGAAGCTGTGTAGCAAATTCCTCTGCCTCAGGCACTTGAGCATTGGCCTTATTGGATTTTTCCCAGCCTATGACTATTTATCCCTGGCTTCTTATATTTATGCTGCACCTTCTCTGGAGACTTTTGACTTGAATGTAATGCAGCGGAACGTGCAGAGTGTTTCAATTTTTGCACATCCTGCAGATCTGAGATCAATACGAGAAGAGAAGCATCACAACCTTAAGAGTGTGACGGTTACATCATTCATCTCTGTAAAGAGCTTGGTTGAGCTGACATGCCATATCCTTGAGAGTACAGCTTCACTCGAGTGCTTGACATTGGATGCTTCTCAGACTGGTTTTAGGTGTGATACTCCAGGCAGCAAAATCAGCAAATGCCCCCCACTAGATAGGGACATTATCATGGAAGGTCACAGAGGGGTCTTGGCTATCAGAAGATACATCCAGCCTAGGGTACCTTCCACAGTGAAGCTGACTGTTTTGGAGCCCTGCAGCTGCCATTCCACTGAACTTTAG</cdnaseq>

Protein Sequence

<aaseq>MGMLDLMRLMSIQRQRDQERRRRQAQAPPRDGLIALRAKRKGSPCQQDGDSQGAADIEIPSLPEDIWRLIHSLMPMRDAARAACVSRSFLSLWRCHPNLNFSSEAFGLNKNACGKEELAGLFYSKVDHILKRHSGIGVKKLKIQIYSDYSGKGSSYLNNWLQISVKPGIEELIISLTQFQAKYNFPCSLLSNGSGDSIQYLHLSNCSFHPTVTLSGLRSLMRLYLCCVRITENELGCLLSHSLALEQLEIRYCDRIVCLKVPCLLQRLISLKVFGCDKLKLIENEAPNVSIFAFQGDKTELKLGETLQIKSLCMVRSGYVYHARAELPSIMPNLESLAIKSRKETAFAPKLCSKFLCLRHLSIGLIGFFPAYDYLSLASYIYAAPSLETFDLNVMQRNVQSVSIFAHPADLRSIREEKHHNLKSVTVTSFISVKSLVELTCHILESTASLECLTLDASQTGFRCDTPGSKISKCPPLDRDIIMEGHRGVLAIRRYIQPRVPSTVKLTVLEPCSCHSTEL</aaseq>

Gene Sequence

<dnaseqindica>1..91#1586..1686#2647..3486#3588..3734#3829..4209#ATGGGGATGCTGGATCTGATGCGCCTCATGTCCATCCAGCGCCAGCGGGACCAGGAGCGCCGCCGCCGCCAAGCCCAAGCTCCCCCCCGTGGTAAAGAAACTACTCCTCATAAGCTTCCTCTCCCACCTCCCTCTGTCACTCTCTGGTCAAGCGGCGGCAGCAGCAGCAGCTTCTTGCGTTTACGGTGGGGGAAGGGAACCAGATGGACTTGCTTGCGCCTCTTTTTCCTGTTTCGTTGGGTGGGTGTTTATTTAGTTTTCTTCACACTAGTTTGTGTCGATTATTCGAATCTGTATATATGTAGTACTAGTATATACACAAACCAAAAAGAAAAAAAAACATGTTTTTATTGAGCGCAAGGTAGGAGATCAAAGGTGGTTTATCCGATCCGCCATGGCTGGTGGCCGGCCACCACCGTCTTGTTCCTTTTCTCTTTAACTAGATTGACGAGACGTAGGGAGAGAGACTACACTGTAACTATAAGGTACCCGCGTGTTGCTGCGGGAATTCTTAGAACAATATTTGTGCGTATGGTCGCATGGATAGCAAAAACACTGAATTGCATTGAAGTAAGACAACCTCTTTTTGTGTGAATATGGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGAATATGGAGTTACGGTTTGTTCAACATTCAAATCAGTTGTGAAATATGAGGATATATATCTTGGTAGCTGACAATTTAGATATTACCGTGGGCAACAGAAAAAGAAAAATGTTTAGTAATACTGTGAGAACTTGGCTAATGATGATAATTCAAAATCATATACATTGCTCCCCAAGTTGGATAACAGGGTTAGCAAAAAAAAATTCATATTCAGATATGAAAGAAGGTTCAGCAGATAAACATGGCTATTAAAATTCAGTTACCGAACAAGGTTCACCAACTAAAAATTTCCATCAAAATTAAGAGTTTTACGCACCTCAATATTATACTTAGACTACGAATCAACCAACTGATGGTCTTGTTTCCTGCATTCTTCAATTGCTTAAAAAGAAGAAAAGGATCTGACAATGAAACCACAGCTACATAGGGCATCGACAGAAAGTGGTTAAAGTTGTAACTGCATATCTACATAGCAGCATACGATAGACACATAATTGAAAGGTCCAGATTAGCATAGCTTCAAGCATCATAAAACATGAAGCTAGTCATGGGTGGAAAGATTCTGTGGAAGGACAGGGATAATAAGCATATTGATTTGAACCTGCGGGAGTGGCATATCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCACTAATTGGGGATAATTGTATTGGTTTATAGGATACTATGCTATGCAAAATAAGAAAAATACTATATGACATGCTGAACTTCAGCCATTTCCCCTTAAATTGATAACATGTTGGTTTCTTTTACAAACTGTTAGTGTTGTTGTACAAAAGGGGACAAAAAAAAAATAACGGATTGCCATGTGTGCAATGGTGTGCTTGCTTGAATTTTCTGTTTATTCCTCAAATGGATGTAAACCATGCATCTTGTGCTGCAGATGGATTGATTGCTTTACGGGCTAAAAGAAAGGGCTCACCCTGCCAACAAGACGGCGATTCTCAGGGTGCTGCTGACATAGAGATACCAAGCCTTCCAGAGGTACACCATAAATAAAATGTTGATGATGAAACATCTTACTAGTAGTGTAGTACAAGTAAATTATGACGATTACTGCTTGAATCGCACAAATCGGTCGACCAACGTTATTAAAGTTTATGAACGGAGCACTTTGATGCTATAACCTCCTACAGCTGCTGCATCGGAACTGTTTTTCCAGCTGTTGCACTTACTTTCAATCACAAATTGTCTACACATAATGCTTTCTTCTAAGCTGGTGGTTCTTAGGCTGGGAGTTTCTCAAGTCAACATCAATGATGAGCTTTTGCCACTAGTCTCCATGCTGTTTCTAACTTCCTTAAATTGTACCATCTCAAAAACGGTTCCGTGCTAACAAATGTTATCTCCGTTAGACCATTGCAGTCAGTACATGGTAATTTTGTGAGCCGCATGTCCTTGTAGGATGGCATTCTTGTTTGATTCCCCGCATCTCCCCATCCTGACTCCCCGCATCTTCCCCATCCTGAGTTCCTGACCTAGTGTATGAAAATCCAAGCAAGTAACCAAACACACCTTAATGTTTCTAACTTCATATCAATTTATTTTAACACTGTAGCTGCCAAAAGTTATTTGATTCTGATACATATTTAACTGAGCTTTCTGGTTGTTTATATATTCAGATATTGGTACCCTATGCAAAGTGCATGTCCATTTCTGTTCCTTTTCTGCCATTAGACAATTAAACATCATTCCATCCATTTTATCTGGCACAATTGCAAAGAAACAAATAGTGCTGAGCACTTAATACATGATTTGGGTAAGAACATATTTGCCTAGCGGAAGTCAACTATATAATTCATAGTAATAGTACATAATCAGGCAGGTAGCACTGGACCAGTTAAAGTGTTACTCCATAAGTTACCATTTTTTTCTTCCATCTAATTCAACCATTTGTCTTCACAATTCCAATGTTTAACTTCTCTCCCATGCTTGTGCAAGCAGGACATCTGGCGTCTTATACATTCCTTGATGCCAATGCGAGATGCTGCCCGAGCTGCCTGTGTGTCTCGTTCCTTTCTAAGTTTGTGGAGATGCCACCCCAACCTCAATTTCAGTAGTGAAGCATTTGGGTTGAACAAAAATGCATGTGGAAAGGAAGAATTGGCTGGACTTTTCTACAGCAAAGTCGACCACATTCTCAAAAGGCACTCAGGCATCGGCGTGAAAAAACTTAAGATTCAGATATATTCAGATTATAGTGGGAAAGGCTCTTCATATCTCAACAATTGGCTTCAGATTTCTGTTAAACCAGGGATTGAAGAACTCATAATTTCACTGACCCAGTTCCAGGCAAAGTACAATTTCCCATGCTCTCTTCTGTCGAATGGGAGTGGAGACTCAATCCAATATCTTCACCTTTCTAACTGTTCCTTCCACCCAACAGTCACACTTAGTGGCTTAAGAAGTCTGATGAGACTGTATCTTTGTTGTGTGCGTATTACGGAGAACGAGTTAGGCTGCCTTCTTTCCCATTCTCTTGCATTGGAGCAGTTGGAAATCAGGTACTGCGATAGGATAGTTTGCCTGAAGGTACCTTGCCTACTGCAGCGGCTCATCTCCCTGAAGGTGTTTGGGTGTGACAAGCTGAAACTGATAGAAAATGAAGCTCCTAATGTCTCCATTTTTGCATTTCAAGGGGACAAAACGGAACTGAAACTTGGAGAAACTTTGCAAATAAAGAGCCTATGCATGGTCCGCTCTGGTTATGTTTATCATGCTCGTGCTGAACTTCCATCCATCATGCCAAATCTTGAATCTCTTGCCATAAAGTCACGCAAAGAGGTATGAGAAATTTTGCCTGACACACTAATGATAGGCATATCTAATGAGACTAGATTCTGTCTTATGGGTTGTAGCATAATTAATTTGACCTCTTTATGCAGACGGCCTTTGCACCGAAGCTGTGTAGCAAATTCCTCTGCCTCAGGCACTTGAGCATTGGCCTTATTGGATTTTTCCCAGCCTATGACTATTTATCCCTGGCTTCTTATATTTATGCTGCACCTTCTCTGGAGACTTTTGACTTGAATGTGAGTAGCTGTTCATATATTATTACTGCTATGAATGAAATTAGTAGCTGTGTGGTGGAAATGTCACTTAAAATTTCTCCCTTTCACATCCTAGGTAATGCAGCGGAACGTGCAGAGTGTTTCAATTTTTGCACATCCTGCAGATCTGAGATCAATACGAGAAGAGAAGCATCACAACCTTAAGAGTGTGACGGTTACATCATTCATCTCTGTAAAGAGCTTGGTTGAGCTGACATGCCATATCCTTGAGAGTACAGCTTCACTCGAGTGCTTGACATTGGATGCTTCTCAGACTGGTTTTAGGTGTGATACTCCAGGCAGCAAAATCAGCAAATGCCCCCCACTAGATAGGGACATTATCATGGAAGGTCACAGAGGGGTCTTGGCTATCAGAAGATACATCCAGCCTAGGGTACCTTCCACAGTGAAGCTGACTGTTTTGGAGCCCTGCAGCTGCCATTCCACTGAACTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021973