BGIOSGA021980

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Revision as of 13:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021980| Description = Enolase 1| Definition = Oryza sativa Indica Group BGIOSGA021980, complete gene.| tag = P0001H02.35| tid = BGIOSGA021...")
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Gene Name

BGIOSGA021980

Description

Enolase 1

Definition

Oryza sativa Indica Group BGIOSGA021980, complete gene.

LocusTag

P0001H02.35

Ensembl Transcript ID

BGIOSGA021980-TA

Ensembl Protein ID

BGIOSGA021980-PA

Length

4737

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2101751..2106487

Sequence Coding Region

2106419..2106487,2106201..2106264),complement(2105556..2105620,2105119..2105166),complement(2104920..2105006
,2104735..2104815),complement(2104552..2104653,2104393..2104473),complement(2104244..2104318
,2103404..2103466),complement(2103214..2103294,2102895..2103089),complement(2102750..2102800
,2102572..2102660),complement(2102435..2102486,2102295..2102351),complement(2101751..2101831

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2101751..2106487 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2101751..2106487 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTGACGATCCAGTCCGTGAAGGCGAGGCAGATCTTCGACAGCCGCGGGAACCCCACGGTGGAGGTGGACGTGGGACTCAGCGATGGCAGCTTCGCGAGGGGCGCCGTGCCGAGCGGTGCTTCCACCGGAATATATGAGGCCTTGGAGTTAAGAGATGGAGGATCCGACTATCTTGGCAAAGGTGTACTCAAGGCTGTGAGCAATGTAAACACTATTATTGGGCCAGCACTCATCGGAAAGGATCCCACTGAGCAAGTTGACATTGATAACTTCATGGTTCAACAGCTTGATGGAACCTCCAACAACTGGGGCTGGTGCAAACAAAAGCTTGGAGCAAATGCTATTCTTGCTGTTTCACTTGCTGTGTGCAAAGCAGGAGCCATGGTGAAGAAGATTCCCCTTTACCAGCACATTGCAAATCTTGCTGGAAACAAGACTCTCGTGCTGCCTGTACCCGCTTTCAATGTGATCAATGGAGGATCCCATGCTGGAAACAAACTTGCCATGCAGGAGTTCATGATCCTCCCTACTGGTGCATCCTCTTTCAAGGAGGCCATGAAGATGGGAGTTGAGGTGTACCACCACTTGAAGAGTATAATCAAGAAAAAGTATGGCCAAGATGCCACAAATGTGGGGGATGAAGGTGGCTTTGCTCCTAACATTCAGGAAAACAAAGAGGGCCTCGAACTGTTGAAGGCCGCAATAGCTAAGGCTGGCTACACAGGCAAAGTGGTCATAGGAATGGATGTTGCAGCTTCTGAATTTTACAGTGAAAAGGACAAGACTTACGATCTTAACTTCAAGGAGGATAACAACGACGGTTCACACAAAATTTCAGGTGACAGCCTGAAAGATGTGTACAAGTCCTTTGTTTCTGAGTACCCTATTGTGTCGATCGAAGATCCATTCGATCAGGATGACTGGGCTACCTATGCCAAGCTTACTGATGAGATTGGACAGCAAGTGCAGATTGTTGGGGATGACCTTCTTGTTACTAATCCCACAAGGGTTGCCAAGGCAATTAGTGAAAAGACTTGCAATGCTCTTCTCTTGAAGGTGAATCAAATAGGCTCAGTTACTGAGAGCATTGAGGCTGTTAGAATGTCCAAGCGTGCTGGATGGGGAGTGATGGCAAGCCATAGGAGTGGTGAGACAGAGGATACCTTCATTGCTGACCTCTCAGTTGGTCTGTCTACGGGTCAAATTAAGACAGGAGCTCCCTGTCGGTCAGAGCGTCTGGCTAAATACAACCAGCTGCTCAGGATAGAAGAAGAGCTGGGCGATGCTGCAGTTTACGCTGGAGAAAAATTCAGAGCCCCTGTGGAGCCGTACTAA</cdnaseq>

Protein Sequence

<aaseq>MAVTIQSVKARQIFDSRGNPTVEVDVGLSDGSFARGAVPSGASTGIYEALELRDGGSDYLGKGVLKAVSNVNTIIGPALIGKDPTEQVDIDNFMVQQLDGTSNNWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFKEAMKMGVEVYHHLKSIIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKAAIAKAGYTGKVVIGMDVAASEFYSEKDKTYDLNFKEDNNDGSHKISGDSLKDVYKSFVSEYPIVSIEDPFDQDDWATYAKLTDEIGQQVQIVGDDLLVTNPTRVAKAISEKTCNALLLKVNQIGSVTESIEAVRMSKRAGWGVMASHRSGETEDTFIADLSVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGDAAVYAGEKFRAPVEPY</aaseq>

Gene Sequence

<dnaseqindica>1..69#224..287#868..932#1322..1369#1482..1568#1673..1753#1835..1936#2015..2095#2170..2244#3022..3084#3194..3274#3399..3593#3688..3738#3828..3916#4002..4053#4137..4193#4657..4737#ATGGCGGTGACGATCCAGTCCGTGAAGGCGAGGCAGATCTTCGACAGCCGCGGGAACCCCACGGTGGAGGTATACGCGAGACATTCATTCGATCCCCTGGAATTGGAATTTCAAATTTTGTTGCGTCGATTCGGTTCTGTTTTTGTATCTATCCGGTTCTTGATTTTGAAGCGCTGAGAAGTTTTCTGTTTGTGTTCAAATCTGGGGTTTGCGCTGTGCGCAGGTGGACGTGGGACTCAGCGATGGCAGCTTCGCGAGGGGCGCCGTGCCGAGCGGTGCTTCCACCGGTAAGCAGATGGCTGAGGCACTGGCTCTTCCATTCTGAAGAACAATGGGTGTTTTTTTTTGTAGTGATAATTCGTTATATGTTAATACCATTTGATCTTCGATTTCCAAGAAACGCGTATCTTCGATATCATCGAATGGTTGGTCCCAATAATTCTTGGGCATGGCAGTAATGAATTGGTGTGTGCGTGGAAAGAGATGTTTGCATAGTTATTTAGATGGGACAGGGGATTGATGATTTTTGAAAACACTCAAACAGTAATAGTAACACGATCATCTCTGTCTGTCAAGGCTGTGTATTGAAATTCATTAGCTCATCGCCCAAAGCACTTGCAATGTGGACCGTAACTGAAACAAGAGAAACCTCTTCAGTTTTTGTTTTTTTAAGAAAGTTGAAATATCTTCAGTTTGTTATAAACTTATAGAGATGACAATATTAGCACGTTATTCAAGCGCTGATGGTTTCCTTCTTAAAGATCTTAGTTCATGTGTTTTTTTACGCTGATCTTAGATTTGTCGTTTACCTTGGCAAAGGTGTACTTAAAATTCATTAGATTTTTCTGTTTCCTGCTTTGACTGTAGGAATATATGAGGCCTTGGAGTTAAGAGATGGAGGATCCGACTATCTTGGCAAAGGTGTACTCAAGGTTAGCTTATTGGCTTTCCCTCGAATGTTAGGACTATTTTACAATCTATAAATAACTTGTTCGTTTATATTGCATTTTGATTGAGCAGATCATATTTCAGCTGAACAGTTAACAATCCAAAGTCTCTGTAATTTATGTTTAAGTAAGGCAGCGTGTACGAAGATAACCGTCATATGTTTGTCTATCTCTTGTGTGGGTCACAAAATTGGTTCAAAGGAACTATTTGGACCTGCATTTTTCAATTTGCAAGTGCGAGAAAATCATTGAACTTTTGTTGGAAAAACTGATTGTTAGGTGTTTTCTACCATTTTCTAACAACTGATGGCACCTATGTATGCCAATCAAGTAAGTCCTCCATGTCTAATGGTGATAATGTCCTCTTTTGGCAGGCTGTGAGCAATGTAAACACTATTATTGGGCCAGCACTCATCGGAAAGGTATGCATCCCATACTACATGATTTTATTGATATCATACACACACACACACACACACACAACAAAGAAAAAAAAAGGATAGCTTTCTTAACTAATGGTGTTTTTTGTTGCAGGATCCCACTGAGCAAGTTGACATTGATAACTTCATGGTTCAACAGCTTGATGGAACCTCCAACAACTGGGGCTGGTGCAAACAAAAGGTATTACTCCATTACTTGTGTAGTAACAATGCTTTTGGATCTAATTGCATCAGACACTGTACTCTTTGCACTGACTTCCTTTGATGTGGTAAAAACAATGACAGCTTGGAGCAAATGCTATTCTTGCTGTTTCACTTGCTGTGTGCAAAGCAGGAGCCATGGTGAAGAAGATTCCCCTTTACCAGGTCTGTTAAACAACTGCATCGGTATATAACTTTGTTCTTCTGAAACTTCAGAACCTATGCTAAAACATCAAGAAATTGCAGCACATTGCAAATCTTGCTGGAAACAAGACTCTCGTGCTGCCTGTACCCGCTTTCAATGTGATCAATGGAGGATCCCATGCTGGAAACAAACTTGCCATGCAGGTAAAATATTGCTTGAATAACAAGACCATGTCGATGCATGATTCAGTCATATTCTCTGCTCATTTAGCTGCTGTACAGGAGTTCATGATCCTCCCTACTGGTGCATCCTCTTTCAAGGAGGCCATGAAGATGGGAGTTGAGGTGTACCACCACTTGAAGGTGAAAAAAAAAAATCAACCTTTTCATTTTGTATCTGAAACTTCAGAATGTGTTATCTGAACTTCTTTATACAGAGTATAATCAAGAAAAAGTATGGCCAAGATGCCACAAATGTGGGGGATGAAGGTGGCTTTGCTCCTAACATTCAGGTAATCCTCCATAAATCTCTGCACGGCTTTCAAGTCAATAAAACTTCTTAGAATGTCCCAGTATTTTTTAGGCAAATCTGACGGGTTTCTCATTATGAAGTAGTAGAAGTGTAGAACTGATCGTAAACATAAGCAGTTAACGTCACTTAAGATGTTCTGAGAATATGAGTAAAGCTAAACTATTCAGATACTATCAACTAAACAACATCTGTATTAGTAAAACTAAGTAGCTTTATTTAAAAGTTTTGACAAGAGTTTTCAAATGTTTTAAATAAGGTGGTGGTATTGGTTCCGTTCAGAATACTTTATTAGAGTAGTAGTACAGCGAGTTGGACCGTACGTACTTGGGCCGTCTACGGCTAATTTCGGCCGGATGTACACAAACCAGCCCAACTAATATGAGCCAGGACCGCACCCTGTTCTGGGCCTAGTGGTATGGGCCGCATAAACACCACTGATCCCATTCAGGTCCAACTAATATGGGCCGCACCATCACACCGGAGGAATAAGTTCACTTTGGCTCCCTTAACTATTGGCCGAATCTGATTTATACCCCTAAACCACGATACCGGAATCTCGTTCCAGCCGAAGTAGTATGGACTATGGACAAAACATTAATCTGGGCCGGATACGTGGATCTAACGATGGATGGTAGTCGGGGCCCACTGGTCAGTCTCATGTGTCCAAAATTGTGCGACCCCTTGGATCTTAGTGAAGCAATATTTGCAGTTACTTTTCATTTTTGTTGCATACATGAACTGAAATATTCATGTGCAGGAAAACAAAGAGGGCCTCGAACTGTTGAAGGCCGCAATAGCTAAGGCTGGCTACACAGGCAAAGTAATTCCCTTTTTTCTCTTAATTTAGCTCATAATTCAAGCATCTCTTTGATTGTATTTGCGTGATCATTATGATTCATCAATATCTATTGATTTCGTTTATATGGCAGGTGGTCATAGGAATGGATGTTGCAGCTTCTGAATTTTACAGTGAAAAGGACAAGACTTACGATCTTAACTTCAAGGAGGATGTAAGATCGGCCTGCAACTTCTTGTCAAATCTTTATCTGCACATAGTTCTTTGTGTTGTTCCATGAAACTACAATAAGAAATAAAACTCAGTGTGTATTAACATGTCTTAAATTTCTTGACCAGAACAACGACGGTTCACACAAAATTTCAGGTGACAGCCTGAAAGATGTGTACAAGTCCTTTGTTTCTGAGTACCCTATTGTGTCGATCGAAGATCCATTCGATCAGGATGACTGGGCTACCTATGCCAAGCTTACTGATGAGATTGGACAGCAAGTGCAGATTGTTGGGGATGACCTTCTTGTTACTAATCCCACAGTAAGTTACAGTTAGTTAATTAATTAATTGCTACTAATCTCAGTTAGTTCTCTCGAAGTTTATGTTTTAACAATGCAATACTTGCCTTTTACAGAGGGTTGCCAAGGCAATTAGTGAAAAGACTTGCAATGCTCTTCTCTTGAAGGTATTGTATGCTGTTCAGAGTTGCTAGTTCTTTTGCTAGGACATTGAATGTAGTGCAATATTGATTATACCATCTGTTTATGCTGTCAGGTGAATCAAATAGGCTCAGTTACTGAGAGCATTGAGGCTGTTAGAATGTCCAAGCGTGCTGGATGGGGAGTGATGGCAAGCCATAGGAGGTAAGAGTTGCAAGTTGTAACTCTTTCAGCTGTTTTCATTGTTTGTAGGATTTGTTTCATTTAACTATTTTTGTCATCTTTTCAGTGGTGAGACAGAGGATACCTTCATTGCTGACCTCTCAGTTGGTCTGTCTACGGTATGGGTTTTGGTTAAACTTGAATTTGATTGTTCTGAGTACCTTCAATGGTAATAACATCATATCCCACAATTTTGTTTCAGGGTCAAATTAAGACAGGAGCTCCCTGTCGGTCAGAGCGTCTGGCTAAATACAACCAGGTAAGCCTCTTGCCTCAAACCCAAATTAGTCATTACTACCTCCTTTGCAGCCAAATACACTTTGAATCTCTGCTTGTTTTCATGGAGCCTTACTCACTAGCCACTACTAGTAATTCATCCGACAAGACCATTAAAATACTCCTTTTGCTGTGTGATTTTGTAATCTATAGTGGAAGTGATTATGTGTGTGAATTAAATTACATTTCATTTAGCATGGCTTGATAGTTTAAGCAGGAATCTATGATAGAACACTGGGCAAAGAACGGCGATTTGCAAACTTGTCACTAGGTAGTATTATGTTTCAGCGGGAGTCTGTTTGCTTGTCCTGGAAGGAGCATCATTTTTTTTTTCCAGAGAATTATTTTAGACTTTTTTTCCCAGAAAATTCAATGAAGAGGTTCCACACAACACTATTGTTTTGGTGATATATACAATTTGTGTCGTTGCTTGCTTGTGGTTGCAGCTGCTCAGGATAGAAGAAGAGCTGGGCGATGCTGCAGTTTACGCTGGAGAAAAATTCAGAGCCCCTGTGGAGCCGTACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021980