BGIOSGA022011

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Revision as of 13:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022011| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022011, complete gene.| tag = OsI_214...")
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Gene Name

BGIOSGA022011

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022011, complete gene.

LocusTag

OsI_21485

Ensembl Transcript ID

BGIOSGA022011-TA

Ensembl Protein ID

BGIOSGA022011-PA

Length

6596

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1779131..1785726

Sequence Coding Region

1785506..1785726,1784927..1785045),complement(1784037..1784186,1783757..1783913),complement(1783240..1783348
,1782805..1782852),complement(1782169..1782269,1781989..1782064),complement(1781178..1781287
,1780798..1780867),complement(1780410..1780475,1780268..1780330),complement(1780112..1780186
,1779131..1779355

Genome Context

<gbrowseImage1> name=IndicaChromosome06:1779131..1785726 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:1779131..1785726 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGCGACGACGAGGATATGCGCGACGTCTCGTCCACGTCGTCCTCCTCCTGCGGCGGAGGGGAGGGCGCGGGGTTCGAGGAGGGGATGGGGGAGGGGGTGATGGTGATGGAGGTGAGGTGGTTCGAGGTGGACCTGGAGTACGAGTTCGACGCGCCCAGGTGGTTCGACCTCGCCGTGGAGGAGTCGCCGGTGGAGGCGGCGGCGGCGCAGCTGTGTTTGATTGTCAACCGCAATGAGTCCATTTTCCTGATAATAAATGAAGAAGAAAAAGCTATGCTGTTCTCAAGGAAAACTGATGTTCTTGAGATGTTAATGGTAGAGAAGGCACCCACAGCCTTAATTGCCAAGATGTTGGCTGAAGATCTTGGGTTGCAAAGTTTAAGAAGCACTGTGGATATAGATGCAGCACATTGCTCTAAATCCTCTCATGAATGTTCCAATGGTGCTGAACAAACGATCCATCGGCCACATATACCAAATGAAGGAAGGATACCTTGCCATCAAGTTTCAGCGAACGAGCGAAAACATGGCGTTCGAACTATTGGAAAAGGAACTATCCCAAAGAGGTCTACACTGATGAAGCCTACAGCCAGTCAATTAGCCAGGCAAAACAGACAAATTGAAGTGAAGAACTCCACACAGAGTAAAAAGTCGGTTGGGGTGAGAAGTGATAGAAGTACCATGAGCTCCAATGACTGCACCTACCAAGCTGCTAAAAGGCAGAGACTAGAAAGAGGGCATCTCAACAAGGTTGTTTCAACTAATCAACCTGAGTTGATCCATAAGAATCATGCAAAGAATGTTATGACTAGTAGCTCTGATCATGCCATTGCTGTACCAAAATTGAAGATTACAATTCCCAGAGAACCTGAATTGGCAACAAAGCTAAGAGCAGAGAGGCCAACTAATTCAAAGCAGCTAAACAAACAGGCGGCACAATCCATTTCTATGACACAAGCGTCATCGATTAGAAAGGTTGTGCAACCTTCTGGGCGCAATGATCATCAGCATGCAAGTGTTCCACATCGCGGTATTGGGTCAAATGTGCCAGTGTGTACTGCTAATCGTCCAAGGCATCTTGACAACATTTGCAAAACGCCGGATGAGTGCAGAGATGACCTGTTTAAATTTAAAGCTCGACCAGTGGATAAAAAGATACTAGGAAGCAAAGGAGATATTGGTGTATTTCAAAATGCCAAAAGGAGCACAACAGTTCCTAAGGAATTTAAGTTGTCAACTGGTAGGAAGGGTAAGCAGGCTCCATTATCTGAACTCTTCAACAAGCTCACTTTAACTACTGAAGCACGCCGTGCTTTAGATCACCGGACTGCTGATCTTCCAAATTATATTACCACCAAGCAAAGTTGCTTGCTTGCTTCTCTCTCCTTGCATCGTTCAAATTACTGGGAAAACAATGTTAGCCAGGAACCATGGAGATATAGTCACAGAGATACTAACTCCATGGGACCCGTAGCTCTGAATTCTGATGCTGGTCGGGCAAAGACGGGCATACAGGCTTGTCCAACCAGAAAAATACTGTGGCATGGTCAGGGTGAGCACCTGATGGCTGATGACCTGACCTGA</cdnaseq>

Protein Sequence

<aaseq>MDGDDEDMRDVSSTSSSSCGGGEGAGFEEGMGEGVMVMEVRWFEVDLEYEFDAPRWFDLAVEESPVEAAAAQLCLIVNRNESIFLIINEEEKAMLFSRKTDVLEMLMVEKAPTALIAKMLAEDLGLQSLRSTVDIDAAHCSKSSHECSNGAEQTIHRPHIPNEGRIPCHQVSANERKHGVRTIGKGTIPKRSTLMKPTASQLARQNRQIEVKNSTQSKKSVGVRSDRSTMSSNDCTYQAAKRQRLERGHLNKVVSTNQPELIHKNHAKNVMTSSSDHAIAVPKLKITIPREPELATKLRAERPTNSKQLNKQAAQSISMTQASSIRKVVQPSGRNDHQHASVPHRGIGSNVPVCTANRPRHLDNICKTPDECRDDLFKFKARPVDKKILGSKGDIGVFQNAKRSTTVPKEFKLSTGRKGKQAPLSELFNKLTLTTEARRALDHRTADLPNYITTKQSCLLASLSLHRSNYWENNVSQEPWRYSHRDTNSMGPVALNSDAGRAKTGIQACPTRKILWHGQGEHLMADDLT</aaseq>

Gene Sequence

<dnaseqindica>1..221#682..800#1541..1690#1814..1970#2379..2487#2875..2922#3458..3558#3663..3738#4440..4549#4860..4929#5252..5317#5397..5459#5541..5615#6372..6596#ATGGACGGCGACGACGAGGATATGCGCGACGTCTCGTCCACGTCGTCCTCCTCCTGCGGCGGAGGGGAGGGCGCGGGGTTCGAGGAGGGGATGGGGGAGGGGGTGATGGTGATGGAGGTGAGGTGGTTCGAGGTGGACCTGGAGTACGAGTTCGACGCGCCCAGGTGGTTCGACCTCGCCGTGGAGGAGTCGCCGGTGGAGGCGGCGGCGGCGCAGCTGTGGTTCGCCTCCGCGCCCAGCTACCCGCCCTCTCGTGCGTGCCCATCCATCCCTACACCTCTTAATTTATTGTGATGTTTTTCTGCATGGCGGGGATGATTCGGGAAGGGGGGTTGGGTCCTTGGGGATGGGATTTAGTTCGATCGATCGATTCGCGGTTGAAATCGTCGATTTAGTATGTGCGCCATTGGTGGGATTTCTATTATGCAGTGTGTTCTCCCTTGCATTATTGATCCGAGAAAGGAGGTTTGGGAGTCCCTAATTTCGAAGTGCTTCTAGGGGCAGCATGCACATGAATTTTCTGAAATACTCCCAACATTTTCAGACCAGCATGATTCAATAGAGTGTGAAATGGTTGAGTGTCATCAATTCGGGTCAGCATTGATCACTTAGATGGATGAGGGATGCATTTAACAGAGATTTTCCTGTTTCTAATTGTGTAATTTGGCCTCGATGTTAAAGTTTGATTGTCAACCGCAATGAGTCCATTTTCCTGATAATAAATGAAGAAGAAAAAGCTATGCTGTTCTCAAGGAAAACTGATGTTCTTGAGATGTTAATGGTAGAGAAGGCACCCACAGGTATCCAGGCCCATAGCAAAAAGGAATGTATGATGTAGCAAGGCAATGGCCATTGGCCTTTTAGGTTTCTTTCATGAGCATCCACAACTAAGAGACATCTTGGAACATGTGACTGCAACAAACAGACTTTGGTTAGTTGCAACTAATTTGGTGTATTCACCCTAAAACTTTGACAACTAATGCTAGATATAAATTGTAAGCTGGTAGAGTTATGTTTGTTAGTATATACTTTCCTGGTATTTCTGGTCTTCTGGAATTGATTAAATTTACATGTGTTACAAACCCAAAATGATATGGGAGGTGAAAGTGAAATATCATCCTTGGTTGTATGCATCAATTTTTGGACAAAACTACGATGGATAGTTCATTGTTTTACTACTCAAGCCTTTTCTATTATCATTAATATGTAAGTACAAATATTTTTTTGGTTATTTCTGTAGTTTTAATGTTTAGCTCATGACAAAGATAGAACTATCATATTACATGACAGGGAAACTTATGGTTACAACACTAGCAAGGTAGCATAAAAAACAGTAACAAGAAGTGAATAAAATATGTACTACTACTATAATGACACTTGTTTGATTATTTGACCTGTATGAATTATGGAAACGTTAGATGTTATTTTTACAGTTTAACTCGCTATTGAACTGTCATTACATTCATTTTTCCTTTTTAATTGGTTATTGCCCTTTGTTGTCAACTTAATATGACTGAAATTTTCTCTGTTGTTTCTGCAGCCTTAATTGCCAAGATGTTGGCTGAAGATCTTGGGTTGCAAAGTTTAAGAAGCACTGTGGATATAGATGCAGCACATTGCTCTAAATCCTCTCATGAATGTTCCAATGGTGCTGAACAAACGATCCATCGGCCACATATACCAAATGAAGGTCCCTATAAGCCCAAAGTTTTCTCCATTATGTTTTTTCCTATTGCATTTCTTACCATATTTGAGCATTTCATTTAGCCTGTTATGCTTTGATCTTTTACCCAGCTTCTTTTATGTAAAATAGGAAGGATACCTTGCCATCAAGTTTCAGCGAACGAGCGAAAACATGGCGTTCGAACTATTGGAAAAGGAACTATCCCAAAGAGGTCTACACTGATGAAGCCTACAGCCAGTCAATTAGCCAGGCAAAACAGACAAATTGAAGTGAAGAACTCCACACAGTATGTAAATGTTATGCCTTATGCTAATTCATATTCTTTAGCTGTCCTAGGGTTGGTACATACAAAATTTGGAGTATTATTCTCTGTTGGATGATTTTATAACAATTTTCTGATTTTGAAGAGATGCATTTACCCTGCCATACTTGCAGTTCCATGAACATGTGTTTCTTGTTGGTTTACTCACCTGCCATTCTTGATGAATTAACCATCCACTAGCATTGATCTTAACCGTTTATGTCAGTATATGCTTGTGTAGCCATCACGTTTTTCTCTTTCACTTCATTATTTCCGGACTTTCACCACCTTTCCTTTTGTTTTAGATTTGCACTGCAAGGATTTTTCAATACATTTAAAGCAAATGCTGTCTTCATGTTTCTGAACTTATGTACCAATTTGCTTTACTATCAGGAGTAAAAAGTCGGTTGGGGTGAGAAGTGATAGAAGTACCATGAGCTCCAATGACTGCACCTACCAAGCTGCTAAAAGGCAGAGACTAGAAAGAGGGCATCTCAACAAGGTATTTTGCTGTTTTTTATTTTCTGGGGGGTATGACCACCCCAAATTATCTGGTGAAGTTGTTTCTTAACTGTAAAACACAGTGAAGTTTGTCGGTACAGTTTTAACTTGAAATACCACATAATTTTGGTAGGGCATTTACCTTTAGTTTTGAGATTGCATACTAGAAACTAGATTATATTTGTCTGGATTAATCGAGAATACTTAATTGACTACAGTCATGGTTCTCATGGCAACTGACAATGGCAGCTAATTTTTTCTGTTAGCATCGCCAAAGTAATAGCCACAAAACCATTTATACTGTTTTTTCACTACAGAGTGATCAGTGCCTATTTGATATTGATTTGTTGCATAACTAGTCACTGAAGCTTCTTTACTTATTGCACAGGTTGTTTCAACTAATCAACCTGAGTTGATCCATAAGAATCATGCAAAGGTCAAGACACCTCAAACATTTACTTCTCTCTCATTTCCTAGGAATATTTCAGCTGTTCCATTTCAATTCTATAGAAAAAATTAGAAAATTATTTGGACTTTTTATACTATAGTTTTTCTTAAAGTGCTTGACATACTCCTGCAACTAGCCAATCATAGCTGTTATACTATGCATTAACAATTAGGGATGCAAGCGGGCCGACCCGCAAGTTCACTTATAGGTCAAATAAATGATAATTCATGGGTTTTCGCGTCGTGGTCCGGTTTGCCGCATCTAGATATGCAAGTGGATCGATCCATAAATCCATTTATAGGTCAAATTAATAGGTAACCCGCTGGTCAAACCCGCGGGTTACGTACTAATTTTGCCTATAAGCGGGTTCGCGGACAAGCCCACTTGCACCCCTATTAACAATCTCTAATATAGAATATACCTTTTATGATACAAAACATGCTCATCGTGCAAGTTTATACATGATTTCTCTGAGGCTGTGCCTCAAATTTTGCTTGACGATGCTTTCTCATGGTTGACACAGAATGTTATGACTAGTAGCTCTGATCATGCCATTGCTGTACCAAAATTGAAGATTACAATTCCCAGAGAACCTGAATTGGCAACAAAGCTAAGAGCAGAGAGGTCAAGGATACTCAGAGCAGTGTAAAGTCATTTTCTCTCGCTCTCCTGTTTGCCTGAATGTCAAGTACTTCTAGGCAGCTCATGTCCTTTTCTTGAAATTTCAGGCCAACTAATTCAAAGCAGCTAAACAAACAGGCGGCACAATCCATTTCTATGACACAAGCGTCATCGATTAGAAAGGTGGATTACATTACTGTTGGGTTTTTGCAGCTTGTTCTGGTTGTCTTCACTAACTATTAAAAAATAAAGTAGGTTACTCACACTTACATACATGAGCGAGCCCTGCCAGACAATATGTATGACTCATTCTATGGTTTTCAATTTTTGGAGGATGGCAATACTCAGTTTGTTTGATAGAGTTCCCTAATCTCAAAGAATTTTAGAAGACGGTGGCACCTGTGAGGCCACAGAAATATTCATAGCAGAGATGTACATGTCAAGATCTCAAGAGAATGTTGCTTTTTTAATGTATAATAGCACAGCGTCTTGGTGGCTGATAGTGTAACTGTAACTGTGACAGTTCAGAAATGGTTTCATTTATGTTTTGTCCAAAGAAACAAATAATTTGTAGAAATATTTAGAAAAAAAACATTCAGTTCAATCAGTGAAAGTCATACACATAGTTTTTAAATCATCTTTTCCAATTTATTATGTGCCCTTGTACACTATTCTGGATCTAATTGCATGGTTGAAGCTGTTCTGTTTACTGCTATTTTCTGCCCTCAAAGTTGAATCATTGTCCTGTACTAGGACAGGCACCTCTACATTTAGATGGTTAACTTTTAATTTGCACTATATAATCTTTATTCTCTGTGAATAGGTTGAAACGACTTATCATATACACACTATCCATGCCTACTAAAAACTTGGTTCTCTGGCAGGTTGTGCAACCTTCTGGGCGCAATGATCATCAGCATGCAAGTGTTCCACATCGCGGTATTGGGTCAAATGTGCCAGTGTGTACTGCTAATCGTCCAAGGCATCTTGACAAGTAAGGCTTGTTTTTTATATACCTCCTCACTTCTAGTCCCATTACTATTTACATAATATCCATCCTATTCGGCAGTACAAAGGAAAGTAAAATATACCTCCTACTATTCTCTTGTAAGTATTTCCTGTAATTTTCTAGTTTTGGTCAGGACAGGTTTCTTCATGGAACCAAATAATGCAATAGTAAAGACTGTTATGCTTTTGATTCTACCCAGTACCTATGATTTTCCCAAGGCAGTGAAACTTCAGAATGATGTGATCTTCTGTAAATAGAGCTGAACTTGTGGCTATTTTCTGTGCTCTGTTAACAGCATTTGCAAAACGCCGGATGAGTGCAGAGATGACCTGTTTAAATTTAAAGCTCGACCAGTGGATAAAAAGGTTGGTGCTGTGGATGGATCTTCTATGCTTGCTTTGAATCTTTTAGTTCATACTGCTCTGGACCTGTTTATCTTTGAAGTTTGAACCCTAGTTTCCAATGGCCTGGATAGCGCCTAGTTGTATTGATTGATATACCTGTTGCAATTTCATGTTCTGGGTGTCAGTGGCCCTACTTTTATAATACAGATAGGAATTAATTGCTGAATATGCAGTTGCTTAAGAAACAACCCTACAGACAGAATATAGGAAAGTTCTAGTTTCACATATTTGATTAACTGCAAATGCAGCCATTGAATCTTACATTTTCTTTGCCTTGGAACAGATACTAGGAAGCAAAGGAGATATTGGTGTATTTCAAAATGCCAAAAGGAGCACAACAGTTCCTAAGGTTCTCTCTTTCTCTGTGTGTGTGTGTGTTGTGGTTTGTTATAAATTCCTCACTCATATTTCTTGCTTGAAAATCCTAGGAATTTAAGTTGTCAACTGGTAGGAAGGGTAAGCAGGCTCCATTATCTGAACTCTTCAACAAGGTACGTACTGATAGAACAGAAACTGATTGCCCTTACTCCTTAGATTATTTGCTCTGATGTTTACTCGTATTATTTTTGAAGCTCACTTTAACTACTGAAGCACGCCGTGCTTTAGATCACCGGACTGCTGATCTTCCAAATTATATTACCACCAAGGTTCTTTCCTTGTTTCAATTTAGCTTGTTTTTACTCCCTTGCGCCTTTAAACAAAGTAACTAAAATATCACTCCTAATCTAATGCAAGGACTGCAAAGAGAACATGATTGGTAACATGCAAAGCTAGCTATGGTAGGTAAGTAATATTTCACTGCCATACGGGGCATTTATCATGTCGCTTCTCAAGTTAGAAACAAGTGCATCACACCCTTCCACATTTTACCATTTTTCAGATCCAGTCAGTCAAGACATACAAAACATAGGAATTCTTCTCTTTGACAATTCCTGGTTCAGATTCCTTTTCTCCACCTGAACAAAGGTAAACGTTAACTCCTAATATTTCAGGTTTCATGATTCGCAATTTCGCACAGTGCATCATGTCATTTCACACCCTGGCAACTTTCCATTATTTTTCAGCAATACATTTGGGTATTTTCATGACACTGATACTTGGGGTGAACTACTGCATTGACATTGCTCTCTACTACCATGTAGGCTAAGCGTCTGTTTTGGACAGTAGGATCTCGACTTCATTTGAGTTTTGACAAAGATGGAGCGATACATTATTTTGACTTGAAGGCACCGACCAAGGCACCGTCCCGGCCATCCCCGGCAACCTCCCGTCTCCGCTGCCGTGCAGCTGAACATAATTCCGTACCTGCTCGCGGCCATGGCGGAGATCGATTTGTACAGAGAAACTAACCATGACGCCGGTGTGTACTCCAGATCTGTAACTTGTTGCCAATCATCATCCAGCAAAGTTGCTTGCTTGCTTCTCTCTCCTTGCATCGTTCAAATTACTGGGAAAACAATGTTAGCCAGGAACCATGGAGATATAGTCACAGAGATACTAACTCCATGGGACCCGTAGCTCTGAATTCTGATGCTGGTCGGGCAAAGACGGGCATACAGGCTTGTCCAACCAGAAAAATACTGTGGCATGGTCAGGGTGAGCACCTGATGGCTGATGACCTGACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022011