BGIOSGA022023

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Revision as of 13:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022023| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022023, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA022023

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022023, complete gene.

LocusTag

OSJNBA0038F22.14

Ensembl Transcript ID

BGIOSGA022023-TA

Ensembl Protein ID

BGIOSGA022023-PA

Length

6439

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1602743..1609181

Sequence Coding Region

1609110..1609181,1608934..1609030),complement(1608671..1608845,1608494..1608599),complement(1608314..1608393
,1607521..1607553),complement(1606915..1607047,1606070..1606187),complement(1605783..1605863
,1605596..1605660),complement(1604839..1604895,1604294..1604365),complement(1603927..1604172
,1603211..1603314),complement(1603019..1603111,1602743..1602884

Genome Context

<gbrowseImage1> name=IndicaChromosome06:1602743..1609181 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:1602743..1609181 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCCGCCGCCGCCGCAGCAGCAGTACCCGGCGACGCCAAGCTAGACTCCTTCCTCCAATGGCTCCAGGCCAACGGCGCCGACCTCCGCGGCTGCACGATCCGCCGCTGCGGCCGCGAGGGCTACGGCGTCTTCTCCACCGCCGCCGAGGCCGGCGCCACCGACGAGGTGGTGATGGTGGTGCCGCTCGATCTCGCCATCACTCCGATGCGGGTGCTGCAGGACCCGCTCGTCGGGCCGCGGTGCCGCGCGCTCTTCGAGGAAGGTGGCGTCGACGACCGCCTCCTCGTCATGCTCTTCCTCATGGTCGAGCGACTCCGCCCTAGCTCCCTCTGGAAGCCGTATTTGGATATGCTTCCAAGCACCTTCGGAAGCTCCATTTGGTTCACCGAAGATGAGCTTGCTGAGTTGGAAGGGACCACACTTCACCGGGCAACCGTGATGCAGAGGAAGTCATTGCAAACCTTATTCGATAATAAGGTTAAAGGTCTGGTTGGGGAGCTCTTAAACGTCGATGAATCAGGAAGCTCAATTGAAGTGCGGTTCGAAGACTTCCTTTGGGCAAACTCAATATTCTGGACTCGAGCATTGAATATACCATTGCCTCGTTTTTATGTTTTTCCGGAATCACTAGACGAAAAGCGGGCCAACATTGGTGATGATTGTGGTGATTCTAGTCTCAGTGCCCCTCAGGGAACTGGGACTGCCATTACAGCTAAGAATATCAGTGGCAATGATAATCCTAAATCAAGTAATACAGAGTCAATTTGGGTTGAGGGCCTTGTCCCTGGAATCGACTTTTGTAATCATAATGTAAAGGCGCTGGCAACATGGGAAGTTGATTCCATGGGACATGTTACTGGATGTCCTTCTTCAATGTACCTTGTACTAGCTGATAAAAGCTTTGTGAAGGCTGAAACAGAGATCTGCATAAATTATGGCAACAAAGGAAATGAGGAACTACTATACCTCTATGGATTTGTAATTGACAACAATCCTGACGATTATCTCATGATTCATTATCCAGTAGAAGCTCTTCGACAGGTTCAATCTGCTGATATTAAGATGAAGCTACTGGAGATACAGAATGCCGAATTGCGATGTCTTTTACCTCGTAGTTTGCTTGAAAATGGATTTTTTGGTAGCTGTTCTGGTGAAAACAAGGAGAACAAAAATAATACAAGTCCTTTTTCTAGTTATAGCTGGAGTGGTCAACGCAAGGTTCCATCATATATCGAGAAAATTGTTTTCTCTCAGGAATTTATAAGTACCCTGCGTACAATTGCTCTGCAAGAACATGAGCTTGAGCATACCGCTTCATTGCTTGGAGAGATTGGATCTAATGAAGATAGAGATGATGAGCTCCGGAGTGCTATATGGGAGGTCAGTGGTGATAATGGAGCACTGAGTTTGCTTGTGGATCTTCTTAGAGTCAAAATGACTGAACTTGAAGAGGGCACTGGAACTGAAGCATCTGACAGCCAACTACTTGAGAAATTCGATCTCAGTGATTCAGAAGACGCAACGAGAAGTGACGAGAGCAACGAGACCAAGTCAAAAGTAAATATTAGGACGTGCATAGTGTACCGCAGAGGCCAAAAGCAGCTGACAAAGTTGTTCTTGAGGGAGGCAGAACATCTTCTGGAGCTGTCGTCAAAAGAAGAGAACTAA</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAAAVPGDAKLDSFLQWLQANGADLRGCTIRRCGREGYGVFSTAAEAGATDEVVMVVPLDLAITPMRVLQDPLVGPRCRALFEEGGVDDRLLVMLFLMVERLRPSSLWKPYLDMLPSTFGSSIWFTEDELAELEGTTLHRATVMQRKSLQTLFDNKVKGLVGELLNVDESGSSIEVRFEDFLWANSIFWTRALNIPLPRFYVFPESLDEKRANIGDDCGDSSLSAPQGTGTAITAKNISGNDNPKSSNTESIWVEGLVPGIDFCNHNVKALATWEVDSMGHVTGCPSSMYLVLADKSFVKAETEICINYGNKGNEELLYLYGFVIDNNPDDYLMIHYPVEALRQVQSADIKMKLLEIQNAELRCLLPRSLLENGFFGSCSGENKENKNNTSPFSSYSWSGQRKVPSYIEKIVFSQEFISTLRTIALQEHELEHTASLLGEIGSNEDRDDELRSAIWEVSGDNGALSLLVDLLRVKMTELEEGTGTEASDSQLLEKFDLSDSEDATRSDESNETKSKVNIRTCIVYRRGQKQLTKLFLREAEHLLELSSKEEN</aaseq>

Gene Sequence

<dnaseqindica>1..72#152..248#337..511#583..688#789..868#1629..1661#2135..2267#2995..3112#3319..3399#3522..3586#4287..4343#4817..4888#5010..5255#5868..5971#6071..6163#6298..6439#ATGGCTGCCGCCGCCGCCGCAGCAGCAGTACCCGGCGACGCCAAGCTAGACTCCTTCCTCCAATGGCTCCAGGTTGCTCCTCGTCCCTCCTGCACATCCCCTTCTACTCGCGTGCACGCCAAATCCCTAAACCCCTGGCTCCTCTCCGCAGGCCAACGGCGCCGACCTCCGCGGCTGCACGATCCGCCGCTGCGGCCGCGAGGGCTACGGCGTCTTCTCCACCGCCGCCGAGGCCGGCGCCACCGACGGTAACATTTGCTATTCCACCTCTTCTCTCGGAGGTTTTAGGAGCTCGTCCTCCGCGCTGACTCGCGCGTTGGCTGTGTCTCGTTGCAGAGGTGGTGATGGTGGTGCCGCTCGATCTCGCCATCACTCCGATGCGGGTGCTGCAGGACCCGCTCGTCGGGCCGCGGTGCCGCGCGCTCTTCGAGGAAGGTGGCGTCGACGACCGCCTCCTCGTCATGCTCTTCCTCATGGTCGAGCGACTCCGCCCTAGCTCCCTCTGGAAGCCGTATGGTCGCAATCCACATCTCTCCATGTTAAACAACTTGATCAGTGATTGAATTTTGGTAATTTCTCTAGGTATTTGGATATGCTTCCAAGCACCTTCGGAAGCTCCATTTGGTTCACCGAAGATGAGCTTGCTGAGTTGGAAGGGACCACACTTCACCGGGCAACCGTGATGCAGGTTCATCAGTAGTGCAAACCTTTTCTTTCAGTTCCTTGGGGATATTTTGGGGAGCCAAGAGCAAATTCGTTTAAACGAACATGCTGCAATTTTGTTTCAGAGGAAGTCATTGCAAACCTTATTCGATAATAAGGTTAAAGGTCTGGTTGGGGAGCTCTTAAACGTCGATGAATCAGGAAGGTTTGTACTGATTTCGCATCATTTTCCAGCGCTGCTGCAACTTTATCACTATATTTCTGTATCAAGCACACATGCATAGTTTCTTTTACATTTTAGTATACACTTCTGTACTGGGGTTCTGCGATACATGGGGATTGCACCCCAAAGTATGATATGAAGAATAGCTTCTCATATAAAGTGATTTGGGGTAACGCATGTTCCATATCTTCATGTGTATGAGTGCACCATTTGTTGTCATCTGGGATAGCGCCTATGTTTTTATTTAATTTTATAGAAATGAGAATCACCAAGATGGCAATGCTGCACTATGAGATAAATTGCTACTTTTATTTTACAGAACATTTATGAATTTTGTTGACATGGCATAGGTTTAACTTATAAATACGTTAGAAATCATTTTAATGCACTGTATACTGGGCTTTGTGTACCTTTGAAATATTTTGATCTGAATATTCTTTTCAGCCAACCCTATTAAATGAATATTTTCTTGTGAAGGCTTCTAGTGCTAAGTAGAGTGTATCCAGCATGATTTTTGTTTATTGATTCTGTGCGTACTTAAAACCCATGAATCCACAAGCAATATCACTCAAATATTGTTCTGTTATACATCTGTATGCCCACCTACCGAGTTTGTGATTTTTACTGTCTAGTATGGCAATGATATACCAATATGGCTAATTCTCATGACTCCCTATCATATGTTTACTGACAAAGAAATTCGTTTTATTTAACAGTAATACTATCAAAATATTGTTTGCAGCTCAATTGAAGTGCGGTTCGAAGACTTCCTTTGGTATGTATAATTATGCTTTGCATTTGCAGTGATAATGTCATATTATAAGGCTTACATTTTTTTGGGGGGAATAATATAAGCCTTACTGATACTGTAGTTTCATAGTATTGACATGGCATATCATGTTAATTTCGTGTGCAAAAGATTCAGTGTGCTAATTTTTTTTTGGACAAATTAGGCATTAGTTTACAAAATGGTGGGGATGTTTTTGTACCTAGCATCAACTAACCTTTGCTACTATTACAATTTTCAAGCCATCAAGGTGGAAATTAGCTCATTCATAAGAAAATTGTACTTAATTGGGTGATGGCTTTGATTTGCAGCTCCTTCAATAAATATCTTGGAACAACAGTTTTATGTCAACAAATGAAAAATGCAATATACACATATGATGCAGGGTCCTTCACATAGTTGCTGGTTCAGTTCCCTGCTTTCTTTGTTTTATGTAACTCAGCAGCACGACTCTATGGCAGGGCAAACTCAATATTCTGGACTCGAGCATTGAATATACCATTGCCTCGTTTTTATGTTTTTCCGGAATCACTAGACGAAAAGCGGGCCAACATTGGTGATGATTGTGGTGATTCTAGTCTCAGTGCCCCTCAGGTTAATTGCATTTTTTCTGACCGCAGATCCTAGCTTCAGAGGTTCTTCTCAATTGTTTTATTTACTTATTGTGTGTGGCTTAATTTTTTCCCCTCGATTATATGTGGTCATTTAGGTTTCTTTTTTGCTCATGTACAACCTATCTGAAAAGTGAAAAAGAGGTTAAACATTGGTTACATGACTTTTTCTTGTCATGAAAGAGTAGCATAGGACCTTGAATGGAATTTTGTTGTCAAGAGAGAGGAACATCGCATAGGACCTTTCTTGGCCCTGAAAATTTTTCATACCAACAGAGAAATTCTGTTACTGAAGGCATATAGTGGTCTCAAGGTATGTGCCACAAAAAAAAAAAAAGAAACTGAATGGGGGCAAGAATATGTTTCTGTTGAACAAACTAGTTGCATAACTGGATATTATAACACGGAAACAGGGAAATGACTTTTATATTATAAGTTGTGGTTTTGTTAATTACAGCAGTAATCTACAATTATCTTAAACAAAATATACTTGTGACATGCTACAATTTGTCCTCAAGGAAACGCCATATACTTTTGAGGACTCATCATATACTTTGCCAATCTCGTGAATATAGATCCAACTTATCTGACAAATCATTGTTTATAATTATGCCAAATTGTATTTGTTTTTAACATCTCAATACTTCAATTAATTTGTTCACCCATATCTTCTTGTTCCAAATTTTAACATGCTAACTGTTTGTTTCCAGGGAACTGGGACTGCCATTACAGCTAAGAATATCAGTGGCAATGATAATCCTAAATCAAGTAATACAGAGTCAATTTGGGTTGAGGGCCTTGTCCCTGGAATCGACTTTTGTAATCATAGTAAGAGTTCTAATAAAAGTTTATGAATTATGTAGTATAGACGAAATATCTAGTTGGCAGATCATTCTATATTCAACTTTTGACAAAAAAAAAACTGTAGGCGAATTTGCAAGGATTTACATAAAAAAAATTGTTGTACTGAAAATAAATACTCATTGAAAAAACATGTTATTTTCAGTCTTACATAGGTATATCATATTTTTCAGATGTAAAGGCGCTGGCAACATGGGAAGTTGATTCCATGGGACATGTTACTGGATGTCCTTCTTCAATGTACCTTGTACTAGGTACATAAGTAGCTCCAGTTTCCTTTTGATAAGAGAACCTCATGATCTTTCCTTTAATCAAATATTTTGATATAAGATTATAGTTCCAATTTATGACTGTTTATTTTTGTATCTCCCTCTAGCTGATAAAAGCTTTGTGAAGGCTGAAACAGAGATCTGCATAAATTATGGCAACAAAGGAAATGAGGTATTACTCACATAGTTACATATGTGCAGATCTAGTCTGACTAGTTTATAAGCAAGTGTGTTATTTTTCTCAAGTTGTTGCTCTTAGTTTTATCGTACTTGTTATTGTGTGACTTGGATTGATGTCACTGTTTCATATTTTCGTGTATACTCATTCTGACTTCTCTGTCACGATTTCTCTATATACTGATACGGGCATTATTGATATATAGCCAAAATAGAACTACCCACAAGAAGATTCTTTTGATTTGTGCATTTAGATATTGGTTGCACTTCAGACAAACAATCCAGGAAAGCTTCATTAGTGCCGTCACCCTGGCCATTCTTTTTTTTTAAAAAAAAAAGAAAAGAAGAGGAAGGACATATGACGGTGATGAACTTCTTGGAGCTCTATGGCCCCCTTTGTTTCATCACTGGGCCTGGTTTGATTTGATTTCTTCATGGATTCACATATCCTTTAGTTCCTTATGGATTTGCATTAAACACACTTGCTAATGTTCTGAAGTATAAAATAATCTTACTTTGGGGCTTCTAACTGATAGATGACTTTGAGACTCAATAGTCAACGAAAAGAAGCTGCAGCGCTGCAGTCTTTTGTTCCGAGAAACTACAAAATGATTAAATGTCATCAAATATTCATACCGTTTATGATTACTGAAATATAGTTGCTGATGAAATGACATAGTTTTGTTTACTTGCAGGAACTACTATACCTCTATGGATTTGTAATTGACAACAATCCTGACGATTATCTCATGGTAACACTCAGTAAGAGATTACTTTTAGCAACAGGTGTTTGTCAACTCAGTTTTCTTTGTTTAGCATATTCCCTGCCAGATATTCTCTTTCTGTCAAACATTATAGTGGCAAAGCACTTGTCTGTCTTGAAACATTGTAGGTAGCCATTACTTAATTGTTCTCCAGCTAAATATTGTAAGTGTAACTCTATCGGTGTTCTGGGATACATAAAGGACCAAACTTTTAGTTAACATTTTAAAAGATAAGAAAACCATTATTCACTGAGAATATCTCCTTTCTTTTAGTTCAAATTATGAAATCGTATGTACCCACCCTTTTTCATTATCAAAGTTGCTGATTGTTTGAAGTGCTCCACATGTTCATAGTGATAAGATGGCTTATACTTGATATTTCCTCCGTTTGGCGTACTTCCTTAAGAAAGTAGCTACTTGTTTGAAATAAAAACTAGAGCTAACAAACGTTCCAAATGCAGATTCATTATCCAGTAGAAGCTCTTCGACAGGTTCAATCTGCTGATATTAAGATGAAGCTACTGGAGATACAGGTAGCAACATTTCTTAGCTCTAGTTTTTATTTACGATATGAAGAATGTTGTGAAAAATTTAGGCCCAACAAGTATCCTTGGACATCACGGGTCTCACTTTCCATATCTTCTGTGTTTACAGAATGCCGAATTGCGATGTCTTTTACCTCGTAGTTTGCTTGAAAATGGATTTTTTGGTAGCTGTTCTGGTGAAAACAAGGAGAACAAAAATAATACAAGTCCTTTTTCTAGTTATAGCTGGAGTGGTCAACGCAAGGTTCCATCATATATCGAGAAAATTGTTTTCTCTCAGGAATTTATAAGTACCCTGCGTACAATTGCTCTGCAAGAACATGAGCTTGAGCATACCGCTTCATTGCTTGGAGAGGTTAGTGTTTTTCACACTCTGTACCATGTGTTCAAAGGCATCAGTTGCATATGTGACATTGCCTTGCCCTGTCCTTTTTTTTTTTCCTTTTTCCTTTGGGACATTTTAGTACCCCAAATTTTACATGACATTGTTCGTAACCATCTAATCTGTTGAGAAGTGGTTAATATCTTTTTCATAAAGGGGACTAATGCCTGGGGATACTGGTTAATAAGATATTAACCACTTCTCAACAGACCATAGAGTTGTCTTATTAACCAGTATCCTCCTGTACTTGTACTGTAAGCTGGCAAACAGTATTTATGAAAATTAGCGCATTTGCTTTCAAACTAAAATATTATCCATGAGTCCAAAATTTTATCACACATGGTACTAATTTTGGCAGCATCATCAATCATAATTTCTTGGTGATATAAAAAAGGTTGTTTTACTCATCTAAAAGGATTAAGAAAGCTTCTCAAGAAGCATTTAGGCTATCTAGTTTCACATTTTCTGATATGACCTTAATATTCACATATTATTTATTTTCCCTAGTTTTCAGCATTATTCTGTATGAGCATATTTATTTCATGGTAAATTGATTGTAGAAATCCTTTGAATCTGTTCGTGTAGATTGGATCTAATGAAGATAGAGATGATGAGCTCCGGAGTGCTATATGGGAGGTCAGTGGTGATAATGGAGCACTGAGTTTGCTTGTGGATCTTCTTAGAGTCAAGTAACACACCCACAACTTGAGAAATTCGATGTCAGTGTACCTGTATTTTTTCTATGGCGTTGTCAATAATTTATTGATCAAGCCCTTCTCTTTTGCAAGAATGACTGAACTTGAAGAGGGCACTGGAACTGAAGCATCTGACAGCCAACTACTTGAGAAATTCGATCTCAGTGATTCAGAAGACGCAACGAGGTAGGGACGTAGGGCCTTTTGACGTTGCTTAATGGATACTTTTTTCTGCATATTAGCACTATCATGCTTGACATTTCCATCTGTACACCTCTTGTTTTTGTGTTTCACCATTACTCTCATTGTCTTTTTCACAGAAGTGACGAGAGCAACGAGACCAAGTCAAAAGTAAATATTAGGACGTGCATAGTGTACCGCAGAGGCCAAAAGCAGCTGACAAAGTTGTTCTTGAGGGAGGCAGAACATCTTCTGGAGCTGTCGTCAAAAGAAGAGAACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022023