BGIOSGA022066

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Revision as of 13:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022066| Description = BGIOSGA022066| Definition = Oryza sativa Indica Group BGIOSGA022066, complete gene.| tag = | tid = BGIOSGA022066-TA|...")
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Gene Name

BGIOSGA022066

Description

BGIOSGA022066

Definition

Oryza sativa Indica Group BGIOSGA022066, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA022066-TA

Ensembl Protein ID

BGIOSGA022066-PA

Length

4279

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:984030..988308

Sequence Coding Region

988090..988308,987869..987994),complement(987202..987339,987000..987095),complement(986589..986831
,986425..986498),complement(986254..986378,985957..986126),complement(985604..985681
,985408..985479),complement(985157..985261,984891..984983),complement(984721..984813
,984145..984268),complement(984030..984043

Genome Context

<gbrowseImage1> name=IndicaChromosome06:984030..988308 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:984030..988308 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCAACATTCGGTGCCACTTCTACGGTTGGCCTCATGGCTGCGCCAACCGGAATTGTATCAGACAAGAAGCCATCTTCTCTATCTTCGGTGTCATCTGTTTCTGTTGCCAGCCGACCACGCAATGCACGCCTTCAGAGGAAGTGCAACTTCAGGGTAAAAGCTGCCAAGGAGTTGTACTTCAACAAGGATGGCTCGGCTATCAAGAAGCTTCAGACTGGAGTAAACAAGCTTGCTGACCTTGTTGGAGTTACACTGGGACCAAAGGGAAGGAATGTTGTTTTGGAGAGCAAGTATGGGTCCCCTAGGATTGTCAATGATGGTGTTACAGTTGCAAGAGAGGTTGAACTGGAGGATCCTGTTGAAAATATTGGAGCTAAGTTGGTTAGGCAAGCAGCAGCAAAGACCAATGATTTAGCTGGAGATGGCACAACTACTTCTGTTGTGCTTGCTCAGGGGCTGATTGCTGAGGGTGTTAAGGTCGTTGCAGCTGGTGCCAATCCTGTGCAAATTACACGTGGTATCGAGAAAACTGCGAAAGCACTAGTTGAAGAGCTAAAGAAATTGTCAAAGGAGGTTGAAGACAGTGAGCTTGCGGATGTTGCTGCAGTCAGTGCTGGCAACAATTATGAAATCGGTAATATGATAGCAGAGGCTATGAGCAAGGTTGGCAGGAAGGGTGTGGTTACCCTTGAAGAAGGGAGAAGTTCTGAGAATAATCTCTATGTTGTGGAGGGAATGCAGTTTGAACGTGGTTATATCTCCCCGTATTTTGTAACTGACAGCGAGAAAATGTCTGCAGAATATGAGAACTGCAAGCTTCTTTTGGTGGACAAAAAAATCACCAACGCAAGGGATCTNCTATCAATGTTTTGGGAGGAGGCCATAANGAGGAGGCTCCTTGCTACTCTTGTTGTCAACAAGCTTAGAGGGTCATTGAAAATTGCCGCTATCAAAGCCCCTGGTTTTGGTGAGCGCAAGACCCAGTACTTGGATGATATTGCCATTCTAACTGGAGCAACTGTAATCAGGGATGAAGTTGGGCTGTCACTTGACAAGGCAGACAAATCAGTTTTAGGAACGGCTGCAAAGGTGGTCCTTAACAAAGAGTCAACAACAATTGTTGGTGATGGCAGTACACAGGAAGAAGTGACTAAGAGGGTTGCACAAATAAAAAATCTCATCGAGGCTGCCGAACAAGAATACGAGAAGGAAAAGCTCAATGAGAGGATTGCAAAGCTTGCTGGTGGTGTTGCAGTCATTCAGGTGGGAGCACAAACAGAGACCGAACTAAAAGAGAAGAAGTTGAGAGTTGAGGATGCCCTAAATGCTACCAAGGCTGCTGTTGAGGAAGGTATTGTTGTTGGTGGAGGGTGCACTCTTCTGAGACTGGCAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTGCTAAGAATGCTGGTGTTAATGGAAGCGTTGTTACCGAGAAGGTTCTCTCTAACGATAACTTCAAGTTTGGTTACAATGCTGCAACTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTCACATCGGATGTCGTCGTCGTCGAGATCAAGGAGCCTGAGCCTGCGCCCGTCACCAACCCGATGGACAACTCCGGCTACGGGTACTGA</cdnaseq>

Protein Sequence

<aaseq>MASTFGATSTVGLMAAPTGIVSDKKPSSLSSVSSVSVASRPRNARLQRKCNFRVKAAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEELKKLSKEVEDSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLEEGRSSENNLYVVEGMQFERGYISPYFVTDSEKMSAEYENCKLLLVDKKITNARDLLSMFWEEAIXRRLLATLVVNKLRGSLKIAAIKAPGFGERKTQYLDDIAILTGATVIRDEVGLSLDKADKSVLGTAAKVVLNKESTTIVGDGSTQEEVTKRVAQIKNLIEAAEQEYEKEKLNERIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAARVDAIKDNLENDEQKVGAEIVRRALSYPLKLIAKNAGVNGSVVTEKVLSNDNFKFGYNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPEPAPVTNPMDNSGYGY</aaseq>

Gene Sequence

<dnaseqindica>1..219#315..440#970..1107#1214..1309#1478..1720#1811..1884#1931..2055#2183..2352#2628..2705#2830..2901#3048..3152#3326..3418#3496..3588#4041..4164#4266..4279#ATGGCTTCAACATTCGGTGCCACTTCTACGGTTGGCCTCATGGCTGCGCCAACCGGAATTGTATCAGACAAGAAGCCATCTTCTCTATCTTCGGTGTCATCTGTTTCTGTTGCCAGCCGACCACGCAATGCACGCCTTCAGAGGAAGTGCAACTTCAGGGTAAAAGCTGCCAAGGAGTTGTACTTCAACAAGGATGGCTCGGCTATCAAGAAGCTTCAGGTGAGCTCCAAAGTTCTTGGACACATCTTATCAAATTTTGGTCACTATGATTCTTAGCCTTGACCAGGCACTCATTAGTTATTTCTACATGTCAGACTGGAGTAAACAAGCTTGCTGACCTTGTTGGAGTTACACTGGGACCAAAGGGAAGGAATGTTGTTTTGGAGAGCAAGTATGGGTCCCCTAGGATTGTCAATGATGGTGTTACAGTTGCAAGAGAGGTATATTACAGTGTTTATTGCGTCAAATAGCATTGAATTTCCTTACAATTTGCTTGTTTGCTGTATGCTATACTTCCACAGAAAAAAAATGTTTGTCTCTGAAAAGTAAAACAGTCTGCACATTTGCTCACAAGTTTCATGCGCAAGTGTATTTCTGTTTACTATTGCTGGTTGCATTTTTGCACACCATGTTCTATCATAATTACCTTTGTGGGTTCTAATATATGATCCTCTGACAAGATGAACCTCAAGTTTGATAGCTGGTCATTGACTTAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTGACAAGATGAACTAGAGTTTGATAGCTGGTCATTGACTTAACTATAGTGGATTGTGCACCATTGTTTTAGTCATGATATAAAGAATTTTTCAATTTTATTTTCTTATTGAACAAGTCAACTGGAGGTTTCTGGATTATCTGTGTAACCTAGTTCCAGAATTTGAGCAGAATTTTCAAGTAACGATCTCTGTACTGCAGGTTGAACTGGAGGATCCTGTTGAAAATATTGGAGCTAAGTTGGTTAGGCAAGCAGCAGCAAAGACCAATGATTTAGCTGGAGATGGCACAACTACTTCTGTTGTGCTTGCTCAGGGGCTGATTGCTGAGGGTGTTAAGGTATGCTATTAGTTGAGACATGAGACCTCTATTACTTGTATGGTCAATCTGTTAAGAGTCGTTAATTTGTGAACTAAGTGAAAATAATTCATTTGCTCTTTTTCAGGTCGTTGCAGCTGGTGCCAATCCTGTGCAAATTACACGTGGTATCGAGAAAACTGCGAAAGCACTAGTTGAAGAGCTAAAGAAATTGTCAAAGGAGGTAAAATAATCGTCAGGCTCTAATGCTTTCAGAATGTTTTAGTTGTGGTTGTGGCAACCTGGTGTTTGTTGCAACAATGCTTAGCTAGACTGAGTCAAATCAGATGATTTATCTATGTAGTATATGCTTTTTTTTGTTCTACTTATAAAAAACATTTTCTTGCTTTAGGTTGAAGACAGTGAGCTTGCGGATGTTGCTGCAGTCAGTGCTGGCAACAATTATGAAATCGGTAATATGATAGCAGAGGCTATGAGCAAGGTTGGCAGGAAGGGTGTGGTTACCCTTGAAGAAGGGAGAAGTTCTGAGAATAATCTCTATGTTGTGGAGGGAATGCAGTTTGAACGTGGTTATATCTCCCCGTATTTTGTAACTGACAGCGAGAAAATGTCTGCAGAATATGAGAACTGCAAGGTAGCTTCAGCCTGAGCACACATACCCCTGCTGTATGCTGCTTTAATCTGTTTCAGTTTCTTATTGCACTATGTTTCCACTATTTTTCAGCTTCTTTTGGTGGACAAAAAAATCACCAACGCAAGGGATCTNCTATCAATGTTTTGGGAGGAGGCCATAANGAGGTGCATACCCANATTCTGATAANNTTGCTGAGGATATNTGACGCAGGAGGCTCCTTGCTACTCTTGTTGTCAACAAGCTTAGAGGGTCATTGAAAATTGCCGCTATCAAAGCCCCTGGTTTTGGTGAGCGCAAGACCCAGTACTTGGATGATATTGCCATTCTAACTGGAGGTGAGGTGGACTTGCGATCTGGTGCATTTGGTTGGGTGATCATTAATGCTGCTTATTTATGATGATTCTGGAGCATCTGGCTGGATGATTAATGCTGCTTATTTATAATGATTTTTTTTCTCTGCAGCAACTGTAATCAGGGATGAAGTTGGGCTGTCACTTGACAAGGCAGACAAATCAGTTTTAGGAACGGCTGCAAAGGTGGTCCTTAACAAAGAGTCAACAACAATTGTTGGTGATGGCAGTACACAGGAAGAAGTGACTAAGAGGGTTGCACAAATAAAAAATCTCATCGAGGTATGTTATATCTGTTTACCATGGTTAATTTGGCACAATAGTGCCTCGCAAATTTTTTTTTTTGGCACAATAGTGGTTCTATATTCCACCATTTCTTTAATCTAGTTATAGACTGTACATATCTGGAAATGTAGCTTGATTGGTTACATGCTTCATCTGGTTTCAAACTGAAAGCTTTCTCTATTATGAGGCTGTATATTGAATGTGTTGTTTGTACAAGAAAAGAAAAGCATCAGTCCTGCTCCTGATTGCTTTTTTATCTATCCAATTTGCAGGCTGCCGAACAAGAATACGAGAAGGAAAAGCTCAATGAGAGGATTGCAAAGCTTGCTGGTGGTGTTGCAGTCATTCAGGTATAATAAGAAATGGACAAAATGCCATGTTATCTGTATCTGTTCTTTTTCTTGGTTCTTTGTTTGGAAAGATAGATAGATGTGGTTATGTGGGTCGTAATCCAAGTTTTGTTACTTTTGATAGGTGGGAGCACAAACAGAGACCGAACTAAAAGAGAAGAAGTTGAGAGTTGAGGATGCCCTAAATGCTACCAAGGTTAGTCTGTTGTTATAACTGCTTTGAGATAGAAATAGATTAATGTTTGCTTCTTAAGGAAGAAAAATTAAGGTAGTTTGTTGCTCACTGAGTTGATATCAACGTTCTTCTGGCTTTGGATCTTTAAACCGCTTCCTCTTTGTCAGGCTGCTGTTGAGGAAGGTATTGTTGTTGGTGGAGGGTGCACTCTTCTGAGACTGGCAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGGTTTACAACCATGATCTACTTTATTCATTGTTTTTGTTCGAGTGTTCTATAAACCTCATCTCTCAAAAGTTCTGTTTTTGTGCCTGCTACTATGTATATGGGTTAGAAATGACCATCTCGAATTTGTTGTCCTTTCTAATTGACTTGTTGTATGTATTGCTTGAACTTTTTAGGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTGCTAAGAATGCTGGTGTTAATGGAAGCGTTGTTACCGAGAAGGTTAGATCTTGTTCACTAACAGAAAATCATATGTTCACATGTACATCTGAATAACATAAAAGATGATGTTTTACCAGGTTCTCTCTAACGATAACTTCAAGTTTGGTTACAATGCTGCAACTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGGTCTGTTGCTCCCCATTGATTTCCGATATTTTTGCATAAAAATTTAGATTGGTGGATTCCCTATATTTTAGCTGAAATAATTATAGCAGTGTGGACTGTGCAGTTACTTTTGTGTTCACCCTTCAGTTCTTACACATACAGCCATTGTTTTGTGTTGATGTTAGTAGTTTCTAATGAAGGTTCTAGATCCAAGGCTTAGTGTTGTGGTCCTAGAAAGATTGAATTGGATGCACCATACAATTTGCTAGGTTTGATTTAGTTACTGCAAGAGAGTGAAATTAACTTTGGGAAACGCTAAAGGAAAAGCATGAACACAAGTAAAAGAACATAGAATTAGACTGTAGCCCTTGCACATGGTTGACACACTACGATTGTTGATTCCCTTTTCCCTACCATGCTTCATGAGAACTGCGATGAGCTAAAGACTATGCTTTCCTGATGATGGGCAACAGGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTCACATCGGATGTCGTCGTCGTCGAGATCAAGGAGCCTGAGCCTGCGCCCGTCACCAACCCGATGGACAACTCCGGTAAATGATATTGGCCAAACGCACTACACTTCAATTTCATGTGATCAAACACTCCCTGAACTGTTGCTAACTTTAAATCTGCTCCGTCTCTTTCTGTCCAGGCTACGGGTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022066

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA022066&oldid=44591"