Os11g0592800

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Revision as of 09:15, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0592800| Description = Similar to CDK5RAP1-like protein| Version = NM_001074728.1 GI:115486104 GeneID:4350829| Length = 3699 bp| Definitio...")
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Gene Name

Os11g0592800

Description

Similar to CDK5RAP1-like protein

Version

NM_001074728.1 GI:115486104 GeneID:4350829

Length

3699 bp

Definition

Oryza sativa Japonica Group Os11g0592800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:24404185..24407883

Sequence Coding Region

24404528..24405030,24405805..24406859,24407630..24407874

Expression

GEO Profiles:Os11g0592800

Genome Context

<gbrowseImage1> name=NC_008404:24404185..24407883 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:24404185..24407883 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgccgctcaccgccgccgccgcgctccgcctcggccggggcctcagccaccgccgcgccttcctcctccgccgccgctactcccccgcgccccttgctccttccccgtgcgcggctcctcgatgcctctccagcgccgcccatccgcccccgcctcctccccgccgcctcgcccgctctggcccctcccgtccgctcgccgcatccgccgccacggccgtgtccgaggcgcagacagatttagagtctggtccggtgacagcaagcaagggtcgcatttaccatgagacatatgggtgccaaatgaatgtaaacgacatggagatcgtgctttctatcatgaaaaatgaagggtatgatgaaattgtccctgaccctgagagtgcagagataatatttatcaacacatgtgcaatccgtgacaacgcagagcagaaagtctggcagcgactgaactacttttggttcctgaaaaggcaatggaaagctaatgttgctgcagggcggtcaagatctctgcggcctccaaagattgccgttcttgggtgcatggcagagcgattgaaggagaaaattctcgattctgataagatggttgatgttgtctgtggacctgatgcgtatagggacttgcctaggttgctgcaggaagttgattatgggcagaagggtatcaacacgcttctctcactcgaggagacgtatgctgacatcaccccagttaggatctctgacaattcagtgaccgcatttgtatcaattatgaggggttgcaacaatatgtgctccttttgtatcgttcctttcactagaggtagggaaaggtcccgtccagtgtcctcaattgtccgagaagttggggagctctggaaagcaggcgtgaaggaagtaatgcttcttggtcagaacgtaaacagttataacgacacttctgaagttgaggaattagaacctggtaaaaactgggagctcagtgaagggttttctagcatgtgcaaggtgaagaatatggggttgcgttttgctgatctcctggatcagttatctttggaataccctgagatgcggttcaggtttacctctccgcatccaaaggattacccagacgagcttctatatttaatgcgggataggcacaatgtttgcaaacttattcatatgccagctcaatcaggcagctcagcagtgctggaacgtatgcgtcggggttatactagagaggcatacttggagcttgtgcagaaaatccgtagtatcattccagatgttgggttaagcagtgatttcataagtggtttttgtggagagacagaagaggaacatgctgagactcttacccttgtaagggctgttggatatgatatggcctacatgtttgcatatagcatgagagaaaagactcatgctcatcggaattatgtggatgatgtccccgatgatgtcaagcagaggagacttgcagagctaatcagcaccttccgtgaaactacagcgaagatctacgattctcaggttgggacagtacagctagttctagtcgagggaccgaacaagcgggctcctgaaacagagatgattggaaaaaccgacagggggcatagggtttcgtttgcgagcgtccctgtaccgcatacatttgaaggtgatgaactgcgcaagccagtggttggtgacttcattgaggtgaaaatcaccaagtcatcgacagcatcattatccggggatgtaatcgcgcgcacaagcttgagcaaattctacaagaatcattcatctgaagcacatgctgttgcggcttaa</cdnaseq>

Protein Sequence

<aaseq>MAAPLTAAAALRLGRGLSHRRAFLLRRRYSPAPLAPSPCAAPRC LSSAAHPPPPPPRRLARSGPSRPLAASAATAVSEAQTDLESGPVTASKGRIYHETYGC QMNVNDMEIVLSIMKNEGYDEIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLK RQWKANVAAGRSRSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQ EVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSIMRGCNNMCSFCIVPFTRGRE RSRPVSSIVREVGELWKAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWELSEGFSSMC KVKNMGLRFADLLDQLSLEYPEMRFRFTSPHPKDYPDELLYLMRDRHNVCKLIHMPAQ SGSSAVLERMRRGYTREAYLELVQKIRSIIPDVGLSSDFISGFCGETEEEHAETLTLV RAVGYDMAYMFAYSMREKTHAHRNYVDDVPDDVKQRRLAELISTFRETTAKIYDSQVG TVQLVLVEGPNKRAPETEMIGKTDRGHRVSFASVPVPHTFEGDELRKPVVGDFIEVKI TKSSTASLSGDVIARTSLSKFYKNHSSEAHAVAA</aaseq>

Gene Sequence

<dnaseqindica>2854..3356#1025..2079#10..254#aacctcgccatggcggcgccgctcaccgccgccgccgcgctccgcctcggccggggcctcagccaccgccgcgccttcctcctccgccgccgctactcccccgcgccccttgctccttccccgtgcgcggctcctcgatgcctctccagcgccgcccatccgcccccgcctcctccccgccgcctcgcccgctctggcccctcccgtccgctcgccgcatccgccgccacggccgtgtccgaggcgcagacagagtaatgtgcccgtttcttttttgcaccccctctcacttcctcctcctcctcctgctgttgttgtggttgtaggtttgctcgggtagtacagtgggcactgtagtgttaaaagtagaggtgttttactagaattgtggcctgatgaacatggtgatcgttattattcgaagtggaaacatcgattgagcacattgtgggtgcagtgaagattagcaagcggcgcgagttgctaggtggaattattccaaggttttggtggtgtaatgatcagtggtgtgtgtgaatcttctggtgcctaattgaaatggttgagtcagtgctaaaatttgcgtttagtgcggtaaagatattgcatggaaattagaacagtaaaaagccatgtgttatgtggaaaaatgtaaatcctaggaattgttttgttgtgtcttatagttaataccctaggtaatccatgttgagtgggtgcctaggtatggatatattctgattttcttaccttgggaatttttctgatcgcgctgaaatatttcacctctgttttggaaaaaaaagatttgaattagttcattggcaataactacaattaattcattgtagtaggtagttatctttcttgtgacactgaaccttgaaggattgaaagacttgttcttttgctttacacaaatattttcgttgttccaatttactatgcttacttcatacttctcttttctgattttgactgcaagctttgctgaccccatgctttgtttttttggtttgtctagtttagagtctggtccggtgacagcaagcaagggtcgcatttaccatgagacatatgggtgccaaatgaatgtaaacgacatggagatcgtgctttctatcatgaaaaatgaagggtatgatgaaattgtccctgaccctgagagtgcagagataatatttatcaacacatgtgcaatccgtgacaacgcagagcagaaagtctggcagcgactgaactacttttggttcctgaaaaggcaatggaaagctaatgttgctgcagggcggtcaagatctctgcggcctccaaagattgccgttcttgggtgcatggcagagcgattgaaggagaaaattctcgattctgataagatggttgatgttgtctgtggacctgatgcgtatagggacttgcctaggttgctgcaggaagttgattatgggcagaagggtatcaacacgcttctctcactcgaggagacgtatgctgacatcaccccagttaggatctctgacaattcagtgaccgcatttgtatcaattatgaggggttgcaacaatatgtgctccttttgtatcgttcctttcactagaggtagggaaaggtcccgtccagtgtcctcaattgtccgagaagttggggagctctggaaagcaggcgtgaaggaagtaatgcttcttggtcagaacgtaaacagttataacgacacttctgaagttgaggaattagaacctggtaaaaactgggagctcagtgaagggttttctagcatgtgcaaggtgaagaatatggggttgcgttttgctgatctcctggatcagttatctttggaataccctgagatgcggttcaggtttacctctccgcatccaaaggattacccagacgagcttctatatttaatgcgggataggcacaatgtttgcaaacttattcatatgccagctcaatcaggcagctcagcagtgctggaacgtatgcgtcggggttatactagagaggcatacttggagcttgtgcagaaaatccgtagtatcattccagatgttgggttaagcagtgatttcataagtggtaggtcacttttccgagatcatcattgtatgaccttatggtctatcttctatctgtttcctgcttttcaaagttgcaatattttctacaaagtactagcaatgtggctatttatttcctgtttggctgcttcaagaaagggtgataaaccatatatgtcgtagctccattggatgtggataatagtaaggatataataacctgagttggaaaatgatgtgctagctaagtaccaccaagtatcactaactgaataaaactggcatgcatgtttagagtttgagactatatcctgtttgactaatttgttgcatgctcacaaatgtgtcacttgcacttgagaatatcttctaggtacaacttagaactaggttgaccatactatatttttggcctaaccagatccacattctatatttatttctatgtgctccttttcttatttccatggtagttcaaatgtatatcctctagttccattccacccccttaattattcatactgaaaaattgaaaatgcttcagaatttcacatcattttcttggagtgtactcagatttactataatactacaacactatcacctgttttgttacatgactttgacaagtcctgctgtcaaaccagttttcttgtgtagttatgctgtgacttgtattttgtttctacaatttgccattttacaattagcaattacacatctgttttctgagtgcacttcgttaatgattattcacttctattttgacaaaaaaaaatctcttgtctattaggtttttgtggagagacagaagaggaacatgctgagactcttacccttgtaagggctgttggatatgatatggcctacatgtttgcatatagcatgagagaaaagactcatgctcatcggaattatgtggatgatgtccccgatgatgtcaagcagaggagacttgcagagctaatcagcaccttccgtgaaactacagcgaagatctacgattctcaggttgggacagtacagctagttctagtcgagggaccgaacaagcgggctcctgaaacagagatgattggaaaaaccgacagggggcatagggtttcgtttgcgagcgtccctgtaccgcatacatttgaaggtgatgaactgcgcaagccagtggttggtgacttcattgaggtgaaaatcaccaagtcatcgacagcatcattatccggggatgtaatcgcgcgcacaagcttgagcaaattctacaagaatcattcatctgaagcacatgctgttgcggcttaaggattactagttgagtttgtagcaggccacatctcaactgaatcagatccccttgccatgatctctatcttgaaatgactgataagttagaccatacaatgcaatttaactggtgactcagttttgtgaagacaactaatgtgatgtgcttttggcatttgaagccaaaacaatcaccagcatttagtctgctagtcatgtgaagcaatgcctcttctcttatgaagtctgtattatcatgtaaagagtttaagcactactggccagcaacattttttttttcttttgcaagttactgcaactcggcagcgtgaggtttatttatttatttttcttctttggg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0592800, RefSeq:Os11g0592800