BGIOSGA022079

From RiceWiki
Revision as of 13:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022079| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022079, complete gene.| tag = P0029D0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022079

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022079, complete gene.

LocusTag

P0029D06.12

Ensembl Transcript ID

BGIOSGA022079-TA

Ensembl Protein ID

BGIOSGA022079-PA

Length

5331

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:678370..683700

Sequence Coding Region

682708..683700,682484..682621),complement(681544..681648,681066..681248),complement(680458..680635
,680130..680374),complement(679639..679811,679121..679318),complement(678370..678760

Genome Context

<gbrowseImage1> name=IndicaChromosome06:678370..683700 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:678370..683700 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGAGCGGGAGCCGTGGGGGGGAGCAACTGGGAGGAGATGGTGAGGAGGATGCTCCCACCGGGGACCACCATCCCGGAGGCGCCGGCCAACCTCGACTATTCGATTGCGCTCGAGTACGACGGCCCTCCGGTGTCCTACGAGCTCCCCAGGATCGATCCCGTCGACCTGCCGGCGATTCCCACCGCGCAGCCCGTCTCCGGCCCGCTGGTGCCCGGGAGGAGCAACGGCGTGGTGGCTCCGGTCGTCAGGCCAGTGTTTATGCCGCCGGTGCACCGGAAGCAGGATGCTCACCGTGCCGAGCCACCGCCGGTTGCGGCACAGGGTAGGAGGAGGAGAAGCTCGGAATCGGTCGATTCGGCGCCGCAGAATGAGGGGTTCTCTGATGATGATGACTCATGCTCGGTGTCGCAAGAATCCGCGCACAATTTCCATGGGCAGAGAGGTGGTAGGACAGCTGCTCAGGAGGGAAGAAGAGCTCAGGTTGTCACATTTGGGGTCACTGAGGACAGCAGGTATGAGAGCAAAGAGTTTGATGATGTGTCGGAACAGTACGTGGCGGTGACCAAGAAGGAGAAGAGAGGGAGGACCTGCAGCCGTTGCGGTAAAAGGAAGTGGGAGAGCAAGGAATCATGCATTGTTTGCGACGCGAGGTTTTGCAGCTACTGCGTGCTCAGGGCCATGGGCTCGATGCCAGAAGGGCGCAAGTGCATCACTTGCATTGGCCAGCCAATCGATGAGAACAAGCGGTCGAAGCTCGGGAAGGGTTCGAGGATACTATCACGTCTGCTCAGCCCGTTGGAAGTAAGGCAAATACTGAAAGCTGAGAAGGAATGCCAAGCAAACCAGCTCCGGCCTGAGCAACTCATCATAAATGGTTTTCCTCTTAATCCAGATGAGATGGCCAGCTTGCTTAGTTGCCAACGGCCTCCTCAAAAGCTCAAGCCTGGAAGATATTGGTACGACAAGGAGTCAGGCTTGTGGGGAAAGGAAGGAGAAAAGCCAGACAGGGTTGTCAGCACTAACCTAACCTTTAATGGAAAGCTTCAGCCCAATGCCAGTAATGGCAACACTCAGGTTTATATGAATGGAAGGGAAATTACCAAGATTGAACTGAGAGTTCTGAAGATTGCACAAGTTCAGTGCCCCCGTGACACTCACTTTTGGGTTTACCATGATGGTGGCTATGAGGAAGAAGGCCAAAACAATATCAAAGGGAAGATATGGGAATCGCCTGTGACACGTTTTGCATGTGCCTTGTTTTCACTACCGGTTCCTCCAGCAAACTCTGACGAACCAAAGGACGAAGCTCCTTATTCAGCAAGAACTGTTCCTGATTACTTAGATCAGAAAAGAATCCAAAAGCTTCTTATTCTTGGATCGCCTGGAGCTGGTACAAGCACCATATTCAAGCAGGCAAAGTTATTATACGACACTAGGTTTACCCAAGAAGAACTTGATAGTATCAAACTTATGATCCAAAGTAATATGTTCAAGTACCTTGGGATCCTTCTTGAGGGCCGTGAGCGTTTTGAGGAAGAGGCTTTGGCTGGATCGAATAACCCAAGCTCAGAGGATGAGAATACGCAGCATGATGGAAATAAATCGAATGGTTCAGATTCTTGCATATACTCGATAAATGCAAAGCTGAAGAAGTTCTCGGATTGGCTTTTGGATATAATAGCAATGGGAGACCTCGATGCATTCTTCCCTGCAGCTACGCGTGAATATGCTCCAATTGTTGAGGAAATGTGGAAGGATCCTGCCATACAAGCAACATATAAAAGAAAAGACGAATTGCATTTTCTCCCTGATGTTGCCGAATATTTCTTGAGCAGGGCCATTGAAGTATCAAGTAATGAGTATGAACCTTCAGAGAAAGATATAATATATTCTGAAGGAGTAACACAAGGGAATGGATTAGCCTTCATTGAGTTTACTCTGGATGACCGTAGCCCTATGTCAGAAATGTACACTGACAATCATGAGCCTCACTCTCAGACACTAAACAAATATCAGCTGATTAGAGTAAGTGCCAAGGGAATGAATGAGGGATGCAAGTGGGTGGAAATGTTTGAGGATGTCAGCATGGTAATATTCTCGGTAGCACTCAGTGACTATGACCAGCTGGGGGCCCCTTCAAGTGGTGGCAACAGTCCCCTTGTGAATAAGATGATCCAAAGCAGGGACTTGTTTGAGGCTACAATCAGGCAACCATGTTTCCGCGACATGCCATTTGTTCTTGTGCTCAACAAGTTCGACCTCTTCGAGGAGAAAATCGGGCGCGTCCCGCTCTCCACCTGCGAGTGGTTCAGCGACTTCTGCCCTCTCCGGACTCACCACAACAATCAGTCGCTGGCTCACCAGGCGTTCTACTATGTCGCGATGAAGTTCAAGGAGTTGTACGCCGCCTGCACGGATCGCAAGCTGTTCGTGTGGCAGGCGCGAGCCCGCGACAGGCTGACCGTCGACGAGGCCTTCAAGTTCATCAGGGAGGTGCTCAAATGGGAGGATGAGAAGGATGGGGGTGGCTACTACCCAGATGAGTCCTTCTACAGCACCACAGAGCTCAGCTCCTCACGTCTGATCAGACAAGAATGA</cdnaseq>

Protein Sequence

<aaseq>MAGAGAVGGSNWEEMVRRMLPPGTTIPEAPANLDYSIALEYDGPPVSYELPRIDPVDLPAIPTAQPVSGPLVPGRSNGVVAPVVRPVFMPPVHRKQDAHRAEPPPVAAQGRRRRSSESVDSAPQNEGFSDDDDSCSVSQESAHNFHGQRGGRTAAQEGRRAQVVTFGVTEDSRYESKEFDDVSEQYVAVTKKEKRGRTCSRCGKRKWESKESCIVCDARFCSYCVLRAMGSMPEGRKCITCIGQPIDENKRSKLGKGSRILSRLLSPLEVRQILKAEKECQANQLRPEQLIINGFPLNPDEMASLLSCQRPPQKLKPGRYWYDKESGLWGKEGEKPDRVVSTNLTFNGKLQPNASNGNTQVYMNGREITKIELRVLKIAQVQCPRDTHFWVYHDGGYEEEGQNNIKGKIWESPVTRFACALFSLPVPPANSDEPKDEAPYSARTVPDYLDQKRIQKLLILGSPGAGTSTIFKQAKLLYDTRFTQEELDSIKLMIQSNMFKYLGILLEGRERFEEEALAGSNNPSSEDENTQHDGNKSNGSDSCIYSINAKLKKFSDWLLDIIAMGDLDAFFPAATREYAPIVEEMWKDPAIQATYKRKDELHFLPDVAEYFLSRAIEVSSNEYEPSEKDIIYSEGVTQGNGLAFIEFTLDDRSPMSEMYTDNHEPHSQTLNKYQLIRVSAKGMNEGCKWVEMFEDVSMVIFSVALSDYDQLGAPSSGGNSPLVNKMIQSRDLFEATIRQPCFRDMPFVLVLNKFDLFEEKIGRVPLSTCEWFSDFCPLRTHHNNQSLAHQAFYYVAMKFKELYAACTDRKLFVWQARARDRLTVDEAFKFIREVLKWEDEKDGGGYYPDESFYSTTELSSSRLIRQE</aaseq>

Gene Sequence

<dnaseqindica>1..993#1080..1217#2053..2157#2453..2635#3066..3243#3327..3571#3890..4062#4383..4580#4941..5331#ATGGCCGGAGCGGGAGCCGTGGGGGGGAGCAACTGGGAGGAGATGGTGAGGAGGATGCTCCCACCGGGGACCACCATCCCGGAGGCGCCGGCCAACCTCGACTATTCGATTGCGCTCGAGTACGACGGCCCTCCGGTGTCCTACGAGCTCCCCAGGATCGATCCCGTCGACCTGCCGGCGATTCCCACCGCGCAGCCCGTCTCCGGCCCGCTGGTGCCCGGGAGGAGCAACGGCGTGGTGGCTCCGGTCGTCAGGCCAGTGTTTATGCCGCCGGTGCACCGGAAGCAGGATGCTCACCGTGCCGAGCCACCGCCGGTTGCGGCACAGGGTAGGAGGAGGAGAAGCTCGGAATCGGTCGATTCGGCGCCGCAGAATGAGGGGTTCTCTGATGATGATGACTCATGCTCGGTGTCGCAAGAATCCGCGCACAATTTCCATGGGCAGAGAGGTGGTAGGACAGCTGCTCAGGAGGGAAGAAGAGCTCAGGTTGTCACATTTGGGGTCACTGAGGACAGCAGGTATGAGAGCAAAGAGTTTGATGATGTGTCGGAACAGTACGTGGCGGTGACCAAGAAGGAGAAGAGAGGGAGGACCTGCAGCCGTTGCGGTAAAAGGAAGTGGGAGAGCAAGGAATCATGCATTGTTTGCGACGCGAGGTTTTGCAGCTACTGCGTGCTCAGGGCCATGGGCTCGATGCCAGAAGGGCGCAAGTGCATCACTTGCATTGGCCAGCCAATCGATGAGAACAAGCGGTCGAAGCTCGGGAAGGGTTCGAGGATACTATCACGTCTGCTCAGCCCGTTGGAAGTAAGGCAAATACTGAAAGCTGAGAAGGAATGCCAAGCAAACCAGCTCCGGCCTGAGCAACTCATCATAAATGGTTTTCCTCTTAATCCAGATGAGATGGCCAGCTTGCTTAGTTGCCAACGGCCTCCTCAAAAGCTCAAGCCTGGAAGATATTGGTACGACAAGGAGTCAGGCTTGTGGGGAAAGGTAAGCCTGTTAGTGTTGGTAGGAGAAGAGCATACCTTCTTATGCAGTCTGAGCTTTTGCTAATGACATTTTGTTCCTGCTGATAGGAAGGAGAAAAGCCAGACAGGGTTGTCAGCACTAACCTAACCTTTAATGGAAAGCTTCAGCCCAATGCCAGTAATGGCAACACTCAGGTTTATATGAATGGAAGGGAAATTACCAAGATTGAACTGAGAGTTCTGAAGGTATCAGTGTTCTATCATTGTACATCTATCTTTGAAAGCGGGTACAATTGCAGAAATATCCATTATGAAACAATATTAATATATATGACACATTTTTTTAAGACTATGTCTAAGTTATATCATAGACACACTTTCTTATAGGCATACAGCCTTTCATAGAATTTCATATGATTGTTCAAACCAAGAAGACAATATTATGGGAGAAACTAGGTGTATACTGTATACCATCCAAATTTTCTTCTTTAGAAATATACCACATACCACAAAAAATAAAGTTTACTTTAATACCGTCCAAACTTCATAACTCTTGTAAATTGACCACTATCATTACCACCTGTTGGACCTCCTAATAGCTATTGAACTAGATGGCTGATCTGGTGTGGCTTGGCTTTGGGTAAGAAGGATTGGCCTCTGTCTAGTGCCTCACTTTCCTTCTGCGGTTCTGTCTACTGTCCTGGTTTGGAAGAAGTCAAACCAAGCCAGATTAGCCATCTAGTTGAGTCTCTCTTTGGAGATTGGACGTGAGGTAACGGGAATAGTAGTTGATGAGATTTGTGAAGTTTGGATGGTCTTAAAGTGAACCCAGCAATTTTGGTGTTATCTATCATAAGAGGAAAGACTTGAGTGGTATACCCAATGTTGTATTCTATTAACAGCAAAACACATGAAGATGAATGTAGCATGTAATCTGACTATAATTTCACCAGATTAAGAAAGAGTGTAAGGACTATGTGCGTGGTTTTTAGGAAACGAATAAGGCGATTTTTTTTGCTGGTACTATAATTGTGCTATCACTATCACTGAATTTGCCTCAATATCTGAATCATTCTTGTAGATTGCACAAGTTCAGTGCCCCCGTGACACTCACTTTTGGGTTTACCATGATGGTGGCTATGAGGAAGAAGGCCAAAACAATATCAAAGGGAAGATATGGGAATCGGTATGTATCTTGCTCAAAGGAGTTCTAACCACTTTGGCAATCATGGATTAGCTCACTTTTATAATCGTGTTCTATTTTCCTTCTTTTCCTCTGCTGCCCCTCTCCCCGTACATAATCCAGTGCATTCTCCCTTCCCTCTTTGTAATTTATCTTATTTTTAATATTTAATGCAGTAGGAGCCTCTCCTACTGTTTCACGTAAAGAAAAAGGAGTTCTAACCCATTCATTGTACTTCCTAAAACTACTGCATGTCTTGTTGTTTTCTTAACATGATTTTGCATGTCCTTATTTGCAGCCTGTGACACGTTTTGCATGTGCCTTGTTTTCACTACCGGTTCCTCCAGCAAACTCTGACGAACCAAAGGACGAAGCTCCTTATTCAGCAAGAACTGTTCCTGATTACTTAGATCAGAAAAGAATCCAAAAGCTTCTTATTCTTGGATCGCCTGGAGCTGGTACAAGCACCATATTCAAGCAGGTACGACCAAATTTGACATTTAAAACTGCAGTAAACTTTTACTTTGTTATACATCTCTTAGGGTGGACTCTACCTTTACCTACTGGCCCTGTATGATATACAGCTTGAATTTGATTTATAGTCTCCGTTTAGTGACATAGAAACCTTCTCGCCGTTCGGAAGCACAGGACTGCAGGTTAACTGTTATAGGTGACAATCACATATGCAACGTGACATGACATTCTGCAAACTATCACTGATCAATTTTCATGTGTTGTTTAGTTATCTCTGGTGTGTTTCTTTTCCAATAAATGCCTGCAAATTTTTATGGAGCACCACACAAGTTATTCATTCTGATATGTGGATGCACAGTTTCCAGTGGACAATTGAGGAGTCAGCCCTATTATTTATCTTGTATACATTTGCATGATGTTTTTTTTTCTCAAAACAGGCAAAGTTATTATACGACACTAGGTTTACCCAAGAAGAACTTGATAGTATCAAACTTATGATCCAAAGTAATATGTTCAAGTACCTTGGGATCCTTCTTGAGGGCCGTGAGCGTTTTGAGGAAGAGGCTTTGGCTGGATCGAATAACCCAAGCTCAGAGGATGAGAATACGCAGCATGGTAGAACCACAGCTAACACATATTCTTCACTTCTATTTTTCAGGGCTATATGCAATATCTTTAAGTTTTTCTTATTGATGCAGATGGAAATAAATCGAATGGTTCAGATTCTTGCATATACTCGATAAATGCAAAGCTGAAGAAGTTCTCGGATTGGCTTTTGGATATAATAGCAATGGGAGACCTCGATGCATTCTTCCCTGCAGCTACGCGTGAATATGCTCCAATTGTTGAGGAAATGTGGAAGGATCCTGCCATACAAGCAACATATAAAAGAAAAGACGAATTGCATTTTCTCCCTGATGTTGCCGAATATTTCTTGAGCAGGGTATTTAACTCAGCTTATATATTAAACAAAGAGTGAATTTATCATTGAAAACTTGCATTATTATTCACAACCTGCCTTTGTGCATTGTGCTACACCAGTACCTATTATGGTTATAACTTTATAAGTGTCAGTGAATCCCTCTAGATTCCTATATCATATCTGTTCCTAAAAATTCTACAACAGCTTGAACCACTAATCATTTGCCTTACTCCGGCACCAAGCATAACATAATGTGCCCCTGCACTTACTTTTTTTTTTTGTGTACACTATAGGTGTTTGAATCCCTCATTGACTTGTCTTTTTATGACATCCTTGCAGGCCATTGAAGTATCAAGTAATGAGTATGAACCTTCAGAGAAAGATATAATATATTCTGAAGGAGTAACACAAGGGAATGGATTAGCCTTCATTGAGTTTACTCTGGATGACCGTAGCCCTATGTCAGAAATGTACACTGACAATCATGAGCCTCACTCTCAGACACTAAACAAGTAAACTCTTTCTTCATGACTCATGCCTGAAGTGCATATAAATCCTTTAATAGTACACATCTCTACATATCCATATACCCTAAACAGTGCCTTTTATTTTCCTTTTCCATCCATCATTTTTTTTGTTACTAGCTCTCTATAAATAAAATAGCCTTAGATATTAAATTGTTGGCAATGTATCTTTCGATTGTGGTAAAATGCATTTCTACTGGTCAGTGAAATAGGTAGGCTACCTGCTCTTTGCTTGGGGTGATTATTTATTTGCCCTGCGAAGCAAGTACCGGAAAGCTATTGTCTCATCAGCTTTTATTCCTTTTCAGATATCAGCTGATTAGAGTAAGTGCCAAGGGAATGAATGAGGGATGCAAGTGGGTGGAAATGTTTGAGGATGTCAGCATGGTAATATTCTCGGTAGCACTCAGTGACTATGACCAGCTGGGGGCCCCTTCAAGTGGTGGCAACAGTCCCCTTGTGAATAAGATGATCCAAAGCAGGGACTTGTTTGAGGCTACAATCAGGTACTATTGGCATTAGCCAGATAGTTTTGTAACTTTAACAGTTCCATAATTGCGCATAATCAGAAAAAAGATATTTAAAGTGACAAGTGATAGATCAAGAGAGGTTGGTCTTGTTCCAATTGAATCTAGTAATAGTTTGGGAGGATTGCATACTTCATATTTGCGAATACCGTATTGCTTGTGTACAAAATGGACAATGTTACAGCTTGTTTCAATTGAATCTAATAGTTTGGGAAGATTGCACATTTCATATTTGCGAATACCATATTGCCTATATATAATGCGAACAATGTTACAGCTTTCCTGAAATTAGTAAAATCTCATTCCAGGACCAAAGTTACTAACCTATACTTGTCCCAGGCAACCATGTTTCCGCGACATGCCATTTGTTCTTGTGCTCAACAAGTTCGACCTCTTCGAGGAGAAAATCGGGCGCGTCCCGCTCTCCACCTGCGAGTGGTTCAGCGACTTCTGCCCTCTCCGGACTCACCACAACAATCAGTCGCTGGCTCACCAGGCGTTCTACTATGTCGCGATGAAGTTCAAGGAGTTGTACGCCGCCTGCACGGATCGCAAGCTGTTCGTGTGGCAGGCGCGAGCCCGCGACAGGCTGACCGTCGACGAGGCCTTCAAGTTCATCAGGGAGGTGCTCAAATGGGAGGATGAGAAGGATGGGGGTGGCTACTACCCAGATGAGTCCTTCTACAGCACCACAGAGCTCAGCTCCTCACGTCTGATCAGACAAGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022079

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA022079&oldid=44604"