BGIOSGA022091

From RiceWiki
Revision as of 13:12, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022091| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022091, complete gene.| tag = OS06G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022091

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022091, complete gene.

LocusTag

OS06G0107700

Ensembl Transcript ID

BGIOSGA022091-TA

Ensembl Protein ID

BGIOSGA022091-PA

Length

2098

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:538839..540936

Sequence Coding Region

540597..540936,540384..540517),complement(540201..540279,539678..539769),complement(539517..539594
,539331..539393),complement(539002..539236,538839..538906

Genome Context

<gbrowseImage1> name=IndicaChromosome06:538839..540936 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:538839..540936 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGTCACGGCTGCGGCCGTCTCCACCTCCGCCGCTGCTGCAGTCACCAAGGCATCGCCGTCCCCCGCCCACTGCTTCCTGCCATGCCCGCCAAGAACCAGAGCCGCCCACCAGCGCGGCCTGCTGCTGCGCGCGCAGGTGTCCACCACCGACGCCGCCGCCGTCGCCGCCGCGCCGGCCAAGAAGGAGAAGATATCCAAGAAGCATGACGAGGGCGTCGTCACCAACAAGTACAGGCCCAAGGAGCCCTACGTCGGCAAGTGCCTCCTCAACACCAAGATCACCGCCGACGACGCGCCCGGCGAGACATGGCACATGGTCTTCAGCACCGAGGGTGAGATCCCCTACAGAGAGGGGCAGTCCATCGGCGTCATCGCCGACGGCGTCGACAAGAACGGCAAGCCGCACAAGCTCAGGCTCTACTCCATCGCCAGCAGCGCTCTCGGCGACTTCGGCGACTCCAAGACCGTTTCACTCTGCGTCAAGAGGCTCGTTTACACCAACGACCAGGGAGAGATTGTCAAAGGAGTCTGCTCCAACTTCCTCTGTGACTTGAAGCCTGGTTCTGATGTCAAGATAACCGGACCAGTAGGCAAAGAAATGCTCATGCCCAAAGATCCCAATGCTAATATTATAATGCTTGCGACCGGTACTGGTATTGCCCCGTTCCGCTCATTCTTGTGGAAAATGTTTTTTGAGAAGTATGATGACTACAAGTTCAATGGTCTGGCTTGGCTCTTCTTGGGAGTCCCAACTAGCAGTTCTTTACTCTACAAGGAGGAGTTTGACAAAATGAAGGCGAAAGCGCCAGAGAACTTCCGGGTCGATTATGCTGTGAGCAGGGAGCAGACCAATGCTCAAGGAGAGAAGATGTACATTCAGACCAGGATGGCAGAGTACAAGGAAGAGCTGTGGGAGCTCCTGAAGAAGGACAACACCTATGTGTACATGTGTGGACTGAAAGGCATGGAGAAGGGTATTGATGACATTATGGTGTCATTGGCTGCAAAAGATGGAATCGACTGGGCTGATTACAAGAAGCAACTGAAGAAGGGCGAACAATGGAACGTGGAAGTCTACTAA</cdnaseq>

Protein Sequence

<aaseq>MAAVTAAAVSTSAAAAVTKASPSPAHCFLPCPPRTRAAHQRGLLLRAQVSTTDAAAVAAAPAKKEKISKKHDEGVVTNKYRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGEIPYREGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGSDVKITGPVGKEMLMPKDPNANIIMLATGTGIAPFRSFLWKMFFEKYDDYKFNGLAWLFLGVPTSSSLLYKEEFDKMKAKAPENFRVDYAVSREQTNAQGEKMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGIDDIMVSLAAKDGIDWADYKKQLKKGEQWNVEVY</aaseq>

Gene Sequence

<dnaseqindica>1..340#420..553#658..736#1168..1259#1343..1420#1544..1606#1701..1935#2031..2098#ATGGCCGCCGTCACGGCTGCGGCCGTCTCCACCTCCGCCGCTGCTGCAGTCACCAAGGCATCGCCGTCCCCCGCCCACTGCTTCCTGCCATGCCCGCCAAGAACCAGAGCCGCCCACCAGCGCGGCCTGCTGCTGCGCGCGCAGGTGTCCACCACCGACGCCGCCGCCGTCGCCGCCGCGCCGGCCAAGAAGGAGAAGATATCCAAGAAGCATGACGAGGGCGTCGTCACCAACAAGTACAGGCCCAAGGAGCCCTACGTCGGCAAGTGCCTCCTCAACACCAAGATCACCGCCGACGACGCGCCCGGCGAGACATGGCACATGGTCTTCAGCACCGAGGGTCTGTAACTCATCATCCATCCTATCCAATCCAATCCAATCCAATCCAATCCTTGATTACTCACTACTCAGGATTGCAGGTGAGATCCCCTACAGAGAGGGGCAGTCCATCGGCGTCATCGCCGACGGCGTCGACAAGAACGGCAAGCCGCACAAGCTCAGGCTCTACTCCATCGCCAGCAGCGCTCTCGGCGACTTCGGCGACTCCAAGACCGTCAGTCCCCCTCTTCTCTTCTCCTCCTTATTCAATCTCATTCCTTCTCATCGGATCGATCTCCTTTCTTCACACCAGATAATCATCTTCACTTGTACCTCTAGGTTTCACTCTGCGTCAAGAGGCTCGTTTACACCAACGACCAGGGAGAGATTGTCAAAGGAGTCTGCTCCAACTTCCTCTGTGAGTTCGTCTGCATTCTTCTCATGATGATCACAATTGCATTCTGATTTTACTGATTAGTTTGCATTCTGCTCTTCTCAAGACGGTATTCAGAGTACTGCACTCTGCTGTCCTGATCAACAAATAGTTTCACACAGTATATATTCAGAGTACTGCGCTTTGCTGCTGCTCTGAACCTGAATACTAACATATTAATTTGTTATAGATTTCAGAGATTCAGTTTAAGTCTTACATATCTCAATCTGCTAGTTTTTTTCCCACTGAAAACAACATGCTGCTAGCTCTAATCTTGAATAATCAATATGATCCATCAAATTATATTTGATTCAACATGTAACCTGCATATAATGATTCTCCATTCAATAAGTTTATGTCTCACATCTACTTTTTGCGGGGTCATGTCTCACATCTACTTCACCTTGCTAATATAGGTGACTTGAAGCCTGGTTCTGATGTCAAGATAACCGGACCAGTAGGCAAAGAAATGCTCATGCCCAAAGATCCCAATGCTAATATTATAATGGTGAGCTTAAATTGCATGGTGAATTGATCCATCGCAAAAAATCTACACCACAACAAATTTTAACCTTGTGCGGTTACTTGCAGCTTGCGACCGGTACTGGTATTGCCCCGTTCCGCTCATTCTTGTGGAAAATGTTTTTTGAGAAGTATGATGACTACAAGGTACCAATGTTGCATCATTAGTTTTCAGACTTTATGCTTGTTTCAAAATCTTAAAATTCATACTTTATTTCTCCAAATGATTTTTTTCTTTGTTTTAAACAATATGTGTGAACTCTTGTGCAGTTCAATGGTCTGGCTTGGCTCTTCTTGGGAGTCCCAACTAGCAGTTCTTTACTCTACAAGGAGGTTAGCTTATACATACATCTCTGCAAGTGCTACTGCTACTTTTGTGTGCTACTGAAATTCCTCACTTGCACTGTATGTATTTGTTAAAATTCAGGAGTTTGACAAAATGAAGGCGAAAGCGCCAGAGAACTTCCGGGTCGATTATGCTGTGAGCAGGGAGCAGACCAATGCTCAAGGAGAGAAGATGTACATTCAGACCAGGATGGCAGAGTACAAGGAAGAGCTGTGGGAGCTCCTGAAGAAGGACAACACCTATGTGTACATGTGTGGACTGAAAGGCATGGAGAAGGGTATTGATGACATTATGGTGTCATTGGCTGCAAAAGATGGTATATATGCTTCTGAACCTTACCTTTTTGCATGGATAATTTAAGAATCTGAGTAATTCTTTTGCATGCTAAATTTTGCATGGTATCGTTGTTAGGAATCGACTGGGCTGATTACAAGAAGCAACTGAAGAAGGGCGAACAATGGAACGTGGAAGTCTACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022091