BGIOSGA022130

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Revision as of 13:12, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022130| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022130, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA022130

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022130, complete gene.

LocusTag

OSJNBA0075G19.29-1

Ensembl Transcript ID

BGIOSGA022130-TA

Ensembl Protein ID

BGIOSGA022130-PA

Length

4337

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:260536..264872

Sequence Coding Region

260536..260688,261419..261527,261622..261683,261810..262019,262135..262222
,262300..262462,262563..262761,262983..263180,263413..263544
,263708..263828,263979..264089,264236..264305,264406..264589
,264663..264872

Genome Context

<gbrowseImage1> name=IndicaChromosome06:260536..264872 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:260536..264872 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGCGGCGTAGGGGGGGAGGTGGACCACCTCGCCGGCGAGAGGGCCACCGCGCAGTTCGACGTTGAACACATGAAGGTTGCCTGGGCTGGCTCCCGCCACGCCGTCGATGTCGCCGACCGCATGGCGCGCCTCGTCGCTTCCGACCCCGTGTTCCGCAAGGATAACAGGACTATGCTCCCCAGGAAGGAGCTGTTCAAGGACACACTCAGAAAGGCAGCCCATGCGTGGAAGCGTATCGTCGAGCTCCGTCTTACAGAAGAGGAGGCAAATTTGCTAAGGCTATACGTGGACCAGCCTGGTTATGTTGATCTGCACTGGGGCATGTTTGTTCCTGCTATAAAAGGCCAAGGGACTGAAGAGCAGCAGAAGAAGTGGCTACCTCTGGCCTACAGGTTCCAAATAATTGGATGCTATGCTCAGACTGAACTTGGTCATGGTTCCAATGTTCAGGGCCTTGAAACAACCGCCACATTTGACCCAAAGACTGATGAGTTTGTTATACACAGCCCGACACTGACCTCTAGCAAGTGGTGGCCTGGTGGCTTGGGAAAAGCTTCCACCCATGCAGTTGTGTATGCTCGTCTGATAACTGAAGGAAAGGACTACGGCATACATGGTTTCATTGTGCAACTACGAAGCCTAGAGGACCACTCTCCCCTTCCCGGTGTTACTCTTGGTGATATCGGTGGAAAATTTGGTAGTGGTGCATACAACAGTATGGATAATGGAGTTCTGCGATTTGACCATGTGCGCATCCCAAGGGATCAAATGTTGATGAGGCTTTCACAAGTTACGAAAGAGGGAAAATATGTGCACTCAGATGTCCCAAAACAGCTGCTTTATGGGACAATGGTTTTTGTTCGTCAAACAATTGTTGCAGATGCTTCTAAGGCTTTATCACGTGCTACTTGCATTGCTGTAAGATACAGCGCTATTCGAAAGCAGTTTGGCCCTCAAACTGGTGGCCCTGAGACTCAGGTCCTCAATTACAAGACTCAGCAAAGCAGACTCTTTCCTTTGCTGGCTTCAGCTTATGCATTTAGGTTTGTGGGTGAGTGGCTGAAGTGGCTGTACACGGATGTCACACATAAACTGGAAGCCAAGGATTTCTCAACACTTCAAGAGGCCCATGCCTGTACTGCTGGGTTGAAGGCTGTGACAACATCTGCGACAGCTGATGGAATTGAAGAATGCCGAAAACTCTGTGGTGGACATGGTTACCTGAACAGCAGCGGGCTTCCTGAATTGTTTGCTATCTATGTTCCTGCTTGCACTTATGAAGGAGACAATGTTGTTTTGCTATTGCAGGTTGCAAGGTTTCTAATGAAGACTGTATCCCAGTTAGCTTCTGGAAAACAGCCTGTTGGTACAACGGCTTACATGGGCAACATACAGTACTTGATGCAATGCAAATGTGGTGTAAATACAGCTGAAGATTGGCTAAATCCTGCTGCCATACGAGAGGTATTTGAAGCTCGGGCTCTCAGGATGGCGGTGAATTGTGCCCAGAACATAAACAAGGCGCCAAGCCAAGAAGAAGGGTTTTATGAGCTATCCCCTGATCTGCTTGAGGTGGCGGTGGCCCATATCCAGTTGATAATTGTAACCAAGTTCATAGAGAAATTAGAGCAGGACATCCCTGGTGAGGGAGTGAAGGAGCAACTGCGCATCCTTTGCAATGTGTACGCGCTGTATCTTGTTCACAAGCATCTGGGTGACTTCCTGTCGACGGGGAGCATCACAGCAAGGCAGGGAGCGCTGGCAAACGAGCAGCTGGGAAAGCTGTATGCGCAGGTGCGGCCGAACGCGGTGGCGCTGGTGGACGCGTTCAACTACACCGACCACTACCTGGGGTCGGTGCTGGGGCGCTACGACGGCAATGTTTACCCGGCGCTGTACGAGGAGGCGTGGAAGGACCCCCTCAACGACACGGATGTGCCGGACGGTTACCAGGAGCACCTCCGCCCTCTGCTCAAGCAGCAGCTCAAGCTCTCCAGGCTATGA</cdnaseq>

Protein Sequence

<aaseq>MEGGVGGEVDHLAGERATAQFDVEHMKVAWAGSRHAVDVADRMARLVASDPVFRKDNRTMLPRKELFKDTLRKAAHAWKRIVELRLTEEEANLLRLYVDQPGYVDLHWGMFVPAIKGQGTEEQQKKWLPLAYRFQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLGKASTHAVVYARLITEGKDYGIHGFIVQLRSLEDHSPLPGVTLGDIGGKFGSGAYNSMDNGVLRFDHVRIPRDQMLMRLSQVTKEGKYVHSDVPKQLLYGTMVFVRQTIVADASKALSRATCIAVRYSAIRKQFGPQTGGPETQVLNYKTQQSRLFPLLASAYAFRFVGEWLKWLYTDVTHKLEAKDFSTLQEAHACTAGLKAVTTSATADGIEECRKLCGGHGYLNSSGLPELFAIYVPACTYEGDNVVLLLQVARFLMKTVSQLASGKQPVGTTAYMGNIQYLMQCKCGVNTAEDWLNPAAIREVFEARALRMAVNCAQNINKAPSQEEGFYELSPDLLEVAVAHIQLIIVTKFIEKLEQDIPGEGVKEQLRILCNVYALYLVHKHLGDFLSTGSITARQGALANEQLGKLYAQVRPNAVALVDAFNYTDHYLGSVLGRYDGNVYPALYEEAWKDPLNDTDVPDGYQEHLRPLLKQQLKLSRL</aaseq>

Gene Sequence

<dnaseqindica>1..153#884..992#1087..1148#1275..1484#1600..1687#1765..1927#2028..2226#2448..2645#2878..3009#3173..3293#3444..3554#3701..3770#3871..4054#4128..4337#ATGGAGGGCGGCGTAGGGGGGGAGGTGGACCACCTCGCCGGCGAGAGGGCCACCGCGCAGTTCGACGTTGAACACATGAAGGTTGCCTGGGCTGGCTCCCGCCACGCCGTCGATGTCGCCGACCGCATGGCGCGCCTCGTCGCTTCCGACCCCGTAACAATAACTTTCTCCCTCTTTCTTTCTTTCTTTGCACAGATAGATAGATAGATAGATTATCAACTTCGGCTCCCCGGATCTCTGATTAAATTACCTGTATGATGCTCTTCTTCTCTTCCCCCAATCCTTCTTTCCTTGTTCTTCAACAACCACACCACGCCGGCCCGATTTTACCCCACGATAATAATTTCATATATTATTTTTAGTTTACTAGCAGCAGCCAGCAGGAGTATTCAGTTGATACTGTTTCGCTGACTTGTTTGCTACCCTAATTATTATTATTAAGGAGTATTTTTTTTAGCTAGATGCGATGCGATGCGATGCTTATTCCACTGCTCCTGCTCTTTCTTCCACACATATCTCCTCTTTTACTATTATTAGTATTGTCACTAGTAATATTATTTATATGCTGCTATAGTGATTTTCTCCTCAGATCAGATCTACCAAAACCTTGTACCCACACAAATATCTTCTACTCTCTTTTTTTTCTGATACTAAACATTATAATATAGCTAGCTGCGCTACAAGATCGATAGAAATTTCTCAGCACCATACATTATGAATCATCTCCATATATGATGTATCAGTAATAACAGTAACAATGTACCAATTGCTACGTGTTTTTCTGTAGCCTCCTCTTTGCTAACAAATGCTAAAATGCTATAAACAAAACAATCCATTACGCTCACAATGGTTTCCTTACATTTTTGACTCCTTTCCAATCTAGGTGTTCCGCAAGGATAACAGGACTATGCTCCCCAGGAAGGAGCTGTTCAAGGACACACTCAGAAAGGCAGCCCATGCGTGGAAGCGTATCGTCGAGCTCCGTCTTACAGGTCAGGTCCCAATCCCGTGATGCTTCTTCTTCTTTTATTAACAACTGATCTTCCTACTCTTAACTCATGTAATGGTGTTGTTGTCCATTAACAGAAGAGGAGGCAAATTTGCTAAGGCTATACGTGGACCAGCCTGGTTATGTTGATCTGCACTGGGTACTAATATCGACCATATTATCTTCACTATCTACTCCGATATAAAGCACTGAAGCTGCTCAATTTTATCCACAAGCTCGATTAATTAATAGGGAACAATACTTTGTGCAAAATTTTATTTTGCAGGGCATGTTTGTTCCTGCTATAAAAGGCCAAGGGACTGAAGAGCAGCAGAAGAAGTGGCTACCTCTGGCCTACAGGTTCCAAATAATTGGATGCTATGCTCAGACTGAACTTGGTCATGGTTCCAATGTTCAGGGCCTTGAAACAACCGCCACATTTGACCCAAAGACTGATGAGTTTGTTATACACAGCCCGACACTGACCTCTAGCAAGGTAATACTCCTATCTACTCTTCCTCTCTTATCTATTAAGATGCTACATTTCTTCTTTAATTTGGAATTTCTTCAATATCTTGTTGCATGGTTCATGATTTTATCCCCATGTGCAGTGGTGGCCTGGTGGCTTGGGAAAAGCTTCCACCCATGCAGTTGTGTATGCTCGTCTGATAACTGAAGGAAAGGACTACGGCATACATGGTAGAGTCTCTTGTATTTTGAAGGTGACTTTTAAGCTGTATCTTTCTTTTTGCGACTCATGACTATCTATATATCAGGTTTCATTGTGCAACTACGAAGCCTAGAGGACCACTCTCCCCTTCCCGGTGTTACTCTTGGTGATATCGGTGGAAAATTTGGTAGTGGTGCATACAACAGTATGGATAATGGAGTTCTGCGATTTGACCATGTGCGCATCCCAAGGGATCAAATGTTGATGAGGTTTGTCCATTGGGTTATCATGTTTTGTTCGGGCACTTGTCAAATACATTCTGATACCTTGATGTAACCATTCTCAAGCACACCCATGCTACTCGTGTAGGCTTTCACAAGTTACGAAAGAGGGAAAATATGTGCACTCAGATGTCCCAAAACAGCTGCTTTATGGGACAATGGTTTTTGTTCGTCAAACAATTGTTGCAGATGCTTCTAAGGCTTTATCACGTGCTACTTGCATTGCTGTAAGATACAGCGCTATTCGAAAGCAGTTTGGCCCTCAAACTGGTGGCCCTGAGACTCAGGTACTATGTCAGATTTGAATTTTTTTTTTGTATTACCACTTATTAATTTGTTTTTATGCTCTTGAAACATTTCCTGTGACATGTATTCCTTTTGCTTTTACTGGAAAAACCATTGTCTGAGTTAATATTTGTACTTTGTTCATCTAAAAGAATTAAATTGATAAACGAGTTTAACTTTTTGCTACCAATGACAAGTGGCTAATGGTCTATAATGGTTACAGGTCCTCAATTACAAGACTCAGCAAAGCAGACTCTTTCCTTTGCTGGCTTCAGCTTATGCATTTAGGTTTGTGGGTGAGTGGCTGAAGTGGCTGTACACGGATGTCACACATAAACTGGAAGCCAAGGATTTCTCAACACTTCAAGAGGCCCATGCCTGTACTGCTGGGTTGAAGGCTGTGACAACATCTGCGACAGCTGTGCGTACAATTATTTAATTCAGTACCACTTTTAATGGTTATACTTGCTGACTGGTCATACTAAGCCTGCAAATTCAGACTTTTGCTTTATCAGTACACATCCTTAAAATGAATAATGGTCAGATCGCATCAATGAGTTTACACGCATAGCTGGTCCAACAGCCTAGCCAGTTTATATAATGAGTGAATTACACAATTTTCATTGTTCTCAAACCTGTTTTTTTTAATGCAGGATGGAATTGAAGAATGCCGAAAACTCTGTGGTGGACATGGTTACCTGAACAGCAGCGGGCTTCCTGAATTGTTTGCTATCTATGTTCCTGCTTGCACTTATGAAGGAGACAATGTTGTTTTGCTATTGCAGGTTAGTATGCTATTGTTGTTTTGTTCTGTGGATACTAATAACTCTCCTACCTGTTTGTGGTTGTGTGGATGGGCTAGCTTGTTGGGCCGAATCATAGGTCCAGTCCTTCAAGTTTCCTCAGTTTTGGTCAATTTACAGTCATAACCTTTGGTGCTCTCTGCAGGTTGCAAGGTTTCTAATGAAGACTGTATCCCAGTTAGCTTCTGGAAAACAGCCTGTTGGTACAACGGCTTACATGGGCAACATACAGTACTTGATGCAATGCAAATGTGGTGTAAATACAGGTATATAGTTGTATCTTCTGGCAGGCTCCTGTTTTAGACAGCTGTATGCCAGTCATCACTGTACGTTATGTATATATATGCCCATTGCTGGGAAGCCATTGATGTTGAGATGAATGCCATAGTGATTCGTTTTTCCATGATTATCGACAGCTGAAGATTGGCTAAATCCTGCTGCCATACGAGAGGTATTTGAAGCTCGGGCTCTCAGGATGGCGGTGAATTGTGCCCAGAACATAAACAAGGCGCCAAGCCAAGAAGAAGGTTGGTATTGCGCCATATGATTATTAATCGAGAATAAAATATAGAACAGAAACCATAGTGCATTTGCATGTAGTTTCGTATTAATTTCCGTGGTCTATTATAAGAAATTGCATAGATGATGATGGTGTGCGTTGCTGAATATGCAGGGTTTTATGAGCTATCCCCTGATCTGCTTGAGGTGGCGGTGGCCCATATCCAGTTGATAATTGTAACCAAGTGAGTATTGCCTAGGATGAAAGAAATCTGAAGTATGGCTTCATTTATATTTTATTGGCATTTATTTATTTCGGTGTGTTATGGTACGTATAATGGTTAGGTTCATAGAGAAATTAGAGCAGGACATCCCTGGTGAGGGAGTGAAGGAGCAACTGCGCATCCTTTGCAATGTGTACGCGCTGTATCTTGTTCACAAGCATCTGGGTGACTTCCTGTCGACGGGGAGCATCACAGCAAGGCAGGGAGCGCTGGCAAACGAGCAGCTGGGAAAGCTGTATGCGCAGGTATGGTGTCCTCCGTCGATGTCAATGTCAAAAGTGGATGAGAAACTGAGAAATGAGACAAATGCAAATGCAGGTGCGGCCGAACGCGGTGGCGCTGGTGGACGCGTTCAACTACACCGACCACTACCTGGGGTCGGTGCTGGGGCGCTACGACGGCAATGTTTACCCGGCGCTGTACGAGGAGGCGTGGAAGGACCCCCTCAACGACACGGATGTGCCGGACGGTTACCAGGAGCACCTCCGCCCTCTGCTCAAGCAGCAGCTCAAGCTCTCCAGGCTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022130