BGIOSGA022142

From RiceWiki
Revision as of 13:13, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022142| Description = BGIOSGA022142| Definition = Oryza sativa Indica Group BGIOSGA022142, complete gene.| tag = | tid = BGIOSGA022142-TA|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022142

Description

BGIOSGA022142

Definition

Oryza sativa Indica Group BGIOSGA022142, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA022142-TA

Ensembl Protein ID

BGIOSGA022142-PA

Length

6656

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:409565..416220

Sequence Coding Region

409565..409869,410648..410873,411539..411664,411759..411923,412000..412118
,412192..412283,412747..413003,413391..413627,413767..413844
,415203..415352,415427..415501,415890..415986,416075..416220

Genome Context

<gbrowseImage1> name=IndicaChromosome06:409565..416220 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:409565..416220 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTAGCTGCTGCTGCCTCCTCGGCCTCGGCTTCCCCTCGCCGCCCTCCGCCCTCCGCATCCTGCGCCGCCGCATGGCCTCTCGCGCCTTCCAGCTCCGCCTCAACCCGCTCACCGGCGACTCCGAATGGCTCGTCGTTGAGGAGGAGGAGGAGGAGGACCACCACCCGACACCGCCACCCAAGCAGCTTCTCGCCACCACCTCCTACCTCGACATGCTCAACGACTCCGCCCGGAACCGCGCATACCGCCGCGCCATCGAAGCCGCCGTCACCGACCCTTCCTCGCGCGTCCTCGACATTGGAGCTGGGACTGGGTTGCTATCCATGATGGCCGCCCGAGCTTTGGCAGCTGTTGGGGGTGAAACTAGAGGAGGAAGTGTTTCAGCATGTGAATCTTACCTCCCAATGGGAAAATTGATGCGAAGGGTACTGAGAGCCAATGGGATGGAAAACAGGGTCAAAGTCTTTCACAAGCGTTCGGATGAGCTCAAAGTCGGAGATGACCTGGATTCACCAGCTGATATATTGGTAAGTGAAATTCTTGATTCTGAGCTGTTGGGCGAGGGTCTGATACCTACTTTACAGCAAGCATATGACATGTTATTGGCAAAAAATCCAAAGATAGTTCCTTATCGAGCCACTACATATGGGCAGCTAGTTGAAAGTACATTCTTGTGGAAGCTACATGATTTGCACAACAATGAAGCAAATGCTGCAGACGGTGTATGGCTGACTCCTGGTGAGATGGAGAGGATTGTGTCTGTGAAGCCACAACAACATGCAATGCAATGTGATGCACTAGAAGATGAGATACGATTGCTGTCAGAACCCTTCAAAGTTTTTGAATTTGACTTTTGGAAACGGCCAGATAGTCATCGTGAGGCCAATATCAAGATACAAACAACACGAGATGGATATGTTCATGCTATTATTTCATGGTGGGTACTTCAATTGGATTCTGCTGGGTCAATCTTCTACTCAACTGCTCCTAGATGGGCGAGACAATCAAGTAGTGAGGGGCCGCAACGCGACATGAAGGATTGGTGTGATCACTGGAAGCAGTGTGTATGGTTCATGCAAGGCAAGGGGATCCCTGCTACGGAAGACCAAGTTCTTTCGTTACGAGCTAGACATAACCAAACCAGCATCTCCTATCAGCTGAACATCAATGATGAAGCATGTGATAGAAGTTCCAAAGGTGACCATCTAACGTTGTTGCCAGAACGGATTGCACTTTATGGTGATAAAGATTGGAGATCAGCTCTGATAAATACCATTAAAAATGCTTTAACTGTGAAATCTTCCCCAACTTGTGTTGTGGCTGACGACAGCATGTTCTTGGCTCTCTTAATTTCCTCCATGTCACCCACTTCAAAAGTCATCGCGATGTACCCTGGTCTACGGGACAAGGGTGCAGCCTATCTTCGATCTGTTGCAGATGCAAATAATTTTTCCATAGACCAGATTCAAGTGATTGGTAAAAGAGCCTCATCTATTACAGCTGATGACCTGAAACATAAAAAGGTTAATTTATTAGTGGGGGAGCCATTTTATCTTGGAAGTGAAGGAATGCTTCCGTGGCAAAATCTACGTTTCTGGTTCGACTTATGGAGGAGCCGTAGCAGCCTTAAAGATGTAGAGGGTTTTGATCACTCAGTTGTCAATGAGACTTTAGGAGCCTGTGGTTACCTGCCTGGAGACCAGCAAGGTCCTTGTCTGCCGTATTATGTATGGCAATGTGGTTATACCAAGAAATTAAGTAAAGTGTACTCTCTGATGGATTTCAACTTTTCTGAGCCAATCCACTCCTGTTTTGGGAAAACAAAGATCGAGTTTTCTCATGATGGAACATGCCATGGTTTTGCGGTTTGGATTGATTGGGTTCTTGATGAGAGAAAATCCGTTGTGTTAACAACCGGACCAGATAACCGATACTGGAAACAAGGAGTACAGCTCTTTGGCAAGCCTGTAGAAGTAAATCCAGGCAAGTCGGTGATGCATGTAGAGGCGTCCTTCGATCCTTCCACGGGTGAGATAACGTTCAGCAGTTCATCAACAACCTGCTCCTGA</cdnaseq>

Protein Sequence

<aaseq>MPSCCCLLGLGFPSPPSALRILRRRMASRAFQLRLNPLTGDSEWLVVEEEEEEDHHPTPPPKQLLATTSYLDMLNDSARNRAYRRAIEAAVTDPSSRVLDIGAGTGLLSMMAARALAAVGGETRGGSVSACESYLPMGKLMRRVLRANGMENRVKVFHKRSDELKVGDDLDSPADILVSEILDSELLGEGLIPTLQQAYDMLLAKNPKIVPYRATTYGQLVESTFLWKLHDLHNNEANAADGVWLTPGEMERIVSVKPQQHAMQCDALEDEIRLLSEPFKVFEFDFWKRPDSHREANIKIQTTRDGYVHAIISWWVLQLDSAGSIFYSTAPRWARQSSSEGPQRDMKDWCDHWKQCVWFMQGKGIPATEDQVLSLRARHNQTSISYQLNINDEACDRSSKGDHLTLLPERIALYGDKDWRSALINTIKNALTVKSSPTCVVADDSMFLALLISSMSPTSKVIAMYPGLRDKGAAYLRSVADANNFSIDQIQVIGKRASSITADDLKHKKVNLLVGEPFYLGSEGMLPWQNLRFWFDLWRSRSSLKDVEGFDHSVVNETLGACGYLPGDQQGPCLPYYVWQCGYTKKLSKVYSLMDFNFSEPIHSCFGKTKIEFSHDGTCHGFAVWIDWVLDERKSVVLTTGPDNRYWKQGVQLFGKPVEVNPGKSVMHVEASFDPSTGEITFSSSSTTCS</aaseq>

Gene Sequence

<dnaseqindica>1..305#1084..1309#1975..2100#2195..2359#2436..2554#2628..2719#3183..3439#3827..4063#4203..4280#5639..5788#5863..5937#6326..6422#6511..6656#ATGCCTAGCTGCTGCTGCCTCCTCGGCCTCGGCTTCCCCTCGCCGCCCTCCGCCCTCCGCATCCTGCGCCGCCGCATGGCCTCTCGCGCCTTCCAGCTCCGCCTCAACCCGCTCACCGGCGACTCCGAATGGCTCGTCGTTGAGGAGGAGGAGGAGGAGGACCACCACCCGACACCGCCACCCAAGCAGCTTCTCGCCACCACCTCCTACCTCGACATGCTCAACGACTCCGCCCGGAACCGCGCATACCGCCGCGCCATCGAAGCCGCCGTCACCGACCCTTCCTCGCGCGTCCTCGACATTGGGTCAGCTAACCCAACCCAATTCAAATACCTCCTCAATTTTGGTTTATGCTCTAAATACCTGAATTTTTCTTTTTAAGCCAGTCCGGCCCAAGTAGGCTAACCAATTTCATTAACATTGGGGAAACAGTACAAGTTACAAACTCATTTACACCAACAGCAGGCACTTCCAGCATCTAAATTTTTTCTTTCTAAAACACTCAGGTTCCTTCCAAATGGACATCATCTCTTTGATGTCTACATACCTCAAATTGTAGGCCATAATTCAACTGCCTGTCGAATTTAGGTTCACTTACTAGCATTACTGGATTATTAGCTAATGTGATCTCATCTCATCTCATGACTCATGGATACTGCATAGGGCACCGATATCATGCTCACTGTTATCTTTAATAGCACCATAAAGCTAAGCATCCAAACTCATGTTAGGTGTTAATTCTCGGGGAAAATATTGCTTTACAGGGTTATAGTTGGGGCTTTTTGTGAAGTTTTTAGATTAGGATTCAGTGAATATCAAGCCATCAGGTTGCATTGGATTGGATAAATATAAACAGATAGTGGGCTCTCTTTTCTAAATTATCTTTTATCAATCATTGAATATAAGTTTTGACCAAGTTATCTATCTCTGGCTATAGGTTTCCTAAGGCTATATTACAAAGCAAATATTACTTTCAGCCTTTTATGTGCAAGTGTCTCATTGCCTTGCTTAAGTTGTCCTGGTTACTGCATGATTATTTCTAGCAAAAGGTGGAATGGATGCTTATGTCTTTAATGATTTCAGAGCTGGGACTGGGTTGCTATCCATGATGGCCGCCCGAGCTTTGGCAGCTGTTGGGGGTGAAACTAGAGGAGGAAGTGTTTCAGCATGTGAATCTTACCTCCCAATGGGAAAATTGATGCGAAGGGTACTGAGAGCCAATGGGATGGAAAACAGGGTCAAAGTCTTTCACAAGCGTTCGGATGAGCTCAAAGTCGGAGATGACCTGGATTCACCAGCTGATATATTGGTATGCTCTTGTTTTAGGCCAGCACTATTGACCATAAGATGCTGCTCATATATATAGCAAATTTGGCAGGGGAAAAATGATCATTTTCCAATCTAAAGAGTAGCACTTGATCATTTGCTACCCCTTGTCTCTCAGACATGTTGCCTCAGGACCCATGGTCAGAGTCTACACATTGTGTGGGAAATGATTGATTTTGCCACCCCAAATGTTCAGTCCCCCATTATATTCTGAATTAAAATTGCTAATCTCATCTATACTTGATTATCCAACCAAAAGTTTCCCAAAAGAAAACCATTCTACTGATCTCACTTATTGTCAATGTGATAGACTATCTGTATCAGGCAAACTGCTGTAGATGTATTGATTGTTTTGTTTTTTTTTCTTGAATACGCAAGAGAGTTGCGTATCATTTCACTAAGAAGAAGAGAAAAACAGGAGAATTGGGAGGGGAGCCCCTCCCCTCACCAAGACCCCACAGGCCAAGACCTTTACAAACAGGGGATTGTTTTGTTATTTTGACTACTGCCATTCAGAGGCACGGCCAACTCAATATTGCTTACTTTCCCTTCTATTTGTGTTTTAGGATATAAGAGGGTTTAACACTTTTCTTGCTATTGTGTATTATGTGTAACTAATACTCGTGCTAACAAAGACATGTTCTGCAGGTAAGTGAAATTCTTGATTCTGAGCTGTTGGGCGAGGGTCTGATACCTACTTTACAGCAAGCATATGACATGTTATTGGCAAAAAATCCAAAGATAGTTCCTTATCGAGCCACTACATATGGGCAGGTCAGTTCCCAGTGCCTTCTAATATGCGTTTGTCCCAATTTTAACAATGTGAGATAAATTTATACTGAATTTGTTGATTTCCTTGATGTCCTAGCTAGTTGAAAGTACATTCTTGTGGAAGCTACATGATTTGCACAACAATGAAGCAAATGCTGCAGACGGTGTATGGCTGACTCCTGGTGAGATGGAGAGGATTGTGTCTGTGAAGCCACAACAACATGCAATGCAATGTGATGCACTAGAAGATGAGATACGATTGGTATGGACTTTAGTTTTGCAAAATCTGGTAGAAAAGTACTGTCCCAACTCCCAAGTCCTAATTTGTCTTAATGTAGCTGTCAGAACCCTTCAAAGTTTTTGAATTTGACTTTTGGAAACGGCCAGATAGTCATCGTGAGGCCAATATCAAGATACAAACAACACGAGATGGATATGTTCATGCTATTATTTCATGGTAGTGCAGCCTCTTGAAGAATCTCTAGTCTTCTGAAATTTCTCTGAATAAATGCATTTATCTGTGACTGCAGGTGGGTACTTCAATTGGATTCTGCTGGGTCAATCTTCTACTCAACTGCTCCTAGATGGGCGAGACAATCAAGTAGTGAGGGGCCGCAACGCGGTTGGTTAAATAATTAGAATTTTGTCCACCTTTTTTTGCATTTAGTCAGTACCTTTTCCTATATTTATGTGATCATAGAGTTGTGCACAACATGTAGAACAGTTGATATGTGCATGCCAATTCCTGATAAGTAGAACAGTCATTCTAGAGTCTGACTTCTACCAAGCCATAGAAAACTATTTATTAGGTCACATGCATATGTGTATACGATCATATGCTTCACAAAAGATCATCCAAGGCAGACACATATGCATACACAGATCCATTCATAGAAGATCATCACAATGAAAAACCATAATCGCTACTAACTTGAATATTTACTGTAGTCGCTAATAAAGATTTGAAACCACTCAGTCAGACTAGCATGCTATTGATGTGGGCCTTTTAGGACTAGCATTACTTCTGAAATACTGAAACTACTTGAAACTATAGAATTTATTCATATTGCTTTCTGCTTTTATAGACATGAAGGATTGGTGTGATCACTGGAAGCAGTGTGTATGGTTCATGCAAGGCAAGGGGATCCCTGCTACGGAAGACCAAGTTCTTTCGTTACGAGCTAGACATAACCAAACCAGCATCTCCTATCAGCTGAACATCAATGATGAAGCATGTGATAGAAGTTCCAAAGGTGACCATCTAACGTTGTTGCCAGAACGGATTGCACTTTATGGTGATAAAGATTGGAGATCAGCTCTGATAAATACCATTAAAAATGCTGTGAGTTTCCCCAATTCATTTGCCTATAAATATTATGATATTTAAGCTATAACTTCTCTGTGGCCTTCCACTTTGCACTACTGGGAAGGAACCACTTATGTTGGTTATGTGTAACTTCCGTAGAATCCAAACGTCTGTTACTTTTGGGAAGGAGGGAGGGAATTCTATGCTTGCCTACTGACATTCAAGTTTCTAATTGATAACCTCTGTTGGCCCCCTTCATGCATATATGAAGCATATTGTTCGACGTTATCAGCAGCTCTGAGATGATTTTGCTTCTGTTCTTAAAATTGATCACTTTTTTTAGTGGGAATACACGATTAATTCTATATTTTTATGCTATGTATAACAACTTGAGCTTATTGATGTTTAATTTTGCCTTGCCAGTTAACTGTGAAATCTTCCCCAACTTGTGTTGTGGCTGACGACAGCATGTTCTTGGCTCTCTTAATTTCCTCCATGTCACCCACTTCAAAAGTCATCGCGATGTACCCTGGTCTACGGGACAAGGGTGCAGCCTATCTTCGATCTGTTGCAGATGCAAATAATTTTTCCATAGACCAGATTCAAGTGATTGGTAAAAGAGCCTCATCTATTACAGCTGATGACCTGAAACATAAAAAGGTAAATGCTGTAAATGCCATTAGTGGGTGATTTTGAATATTCGTCGATTCCCTCATTCTTGTTTAAATTCAGAGTTTCATATGCTGCCGTGTTATATGAATGCATCTTGATATTATTAATTATCTGTTCATCTCCATAGGTTAATTTATTAGTGGGGGAGCCATTTTATCTTGGAAGTGAAGGAATGCTTCCGTGGCAAAATCTACGTTTCTGGTTCGTAAGATACCAACTCACATTACCAATTGCCCCTTTAAAATAAGGCTTTCTACTCCCTAATGTCACAATCTTTGTTCATTATCTTGGGAAATGTTGTGCCACACAGTCTGTCCTTTTAAGAAACTGGGTGTGTATTCTGCATTGTTCCGTTCTCTGGTCCTTGTGAGAAATGGTTGTAATTTATCTTTTAAGGGGGTACACATGATGATTTCTGGTTAGCTGCATTGTTAAATTAGCGCTTTCTTATTCTCTTGCATGGTGAGCTTCGACATGTTTTGAAACGAAGGAAATACAGTTAGTTACTTATCAATATGTTGATTAATTTGCACTTTAAATCATTCACTGTGTAAAAAACTTGATTCTTTAGAGTTGTCCTTTTGTTTTTGGCATATTTCTGTACAAGGGGAAAACTACCCCCAGTTTGATAAGATGAAGCCATTGCTGATTGATGTTAGAGATTTCTACACTCTGCTAGTGCATGCTGCTTTTCAAAGATTTCCTAACAATGAAGCCAATAATTTTCGATATTGTATGGTACTCCGTAGCCTGCAGTATGTCCATCACAGATTCACAATCCATCACAGATTCACAATAGAACATGCAATTGACCACTTGATCCTGTACAACTTGTTTGTTAAGGAATGGAATAGAGTTTAGATCAGTACGTCGCTACCTTATCCCTCAAAGACACATGCTTACTAGAAAAATCAGGAATGGGATGATGTCATCATGAATCAACTCATGGTTGATGGTTTGATTCCTCAAACCAAACAACTCACTAGTATTACTTAACCCATGTTTGGTGTGAAATTATTTGGAGTACCATCTCTTTGGTTATAGTTGCATATGAAGTATAAACCTTGGGAACAATTTGCACAACCAGGTTAATCTTTCAAGCAAAAGCTGGAATAAGAGTTACTAGTAGTGTTTGCGCAGACTGGACTTGTCTGGTAGTGATACACCTGGTTTCCTTGTTTCTGTTGCATTTATCAAGCACCACACATCCATATTGTTTTAAGATTCATCAAACCCAGGGAGGACAAGTAAAAAATACAAACATTTTTTTTATTTGAAATCACCTTTTATGTATTTACATATTGATTTCAATTGTATTTTTAAGGTAAGACTTAAAAATATATATCCCTGATGTTTTAACTCTAGGAGTGTGAGGACCCTACTTGACTCGATGTTATCTGAGGATGCATTCATCATGCCTTGTAAAGGAATACTAAAGCTATGTGCAATGTCACTTCCGGTCAGATTTTCACATGCTCACCTTTCTGTTATGTTTCTTCAACATCGTTTTCTTTTGCGGAAAAAAACTGTCAGTTTTCATTTTCGTGAATTAAAGTACTGCAGGACTTATGGAGGAGCCGTAGCAGCCTTAAAGATGTAGAGGGTTTTGATCACTCAGTTGTCAATGAGACTTTAGGAGCCTGTGGTTACCTGCCTGGAGACCAGCAAGGTCCTTGTCTGCCGTATTATGTATGGCAATGTGGTTATACCAAGGTAAAATCGAATTATGAGTGCAGATGCAGTGTCATTTTCAAGTGACTAATGAGTAATGACCTTAACTTTTACAGAAATTAAGTAAAGTGTACTCTCTGATGGATTTCAACTTTTCTGAGCCAATCCACTCCTGTTTTGGGAAAACAAAGGTATATTTTGATGTTTCTTCATGATTGCATGTCATTGAGGTTTTTGAATTTACTAGCCCTGCAATTTGATAAGATCCCAAGTAGTATTTTGAGTAAAATGCCTGCAGGCTATCTTTTGTGGGTGATTCTGTTATACTTCTGCGAAACCTTTCTTTTTGGCCTCTAGACAATGGTATTGCTAAGAGGTGTATAAGAAACCTAGGGTTGGCACTTAGCTAGATGATGTTAGTTCGAGTAATCTATAATCTGTACCCTGTATATTGGTTTAGCAGTGGATGGATTTCCAAGTCTCGTGATCTTAACAAATCATGGAAGTGCTTTCTCAGATAAACATGCATTTGTGGTCTGAAATGCGCATATAATTATCTTACTGTCTACGGCCTTGCAGATCGAGTTTTCTCATGATGGAACATGCCATGGTTTTGCGGTTTGGATTGATTGGGTTCTTGATGAGAGAAAATCCGTTGTGTTAACAACCGGACCAGGTAAATATATATAAATTCCTGATATCTGTGCTTGGGAGAGATGAATTGATGAGAAGATTGATGGTGTTGGTGTTGATTTTGAGCTCAGATAACCGATACTGGAAACAAGGAGTACAGCTCTTTGGCAAGCCTGTAGAAGTAAATCCAGGCAAGTCGGTGATGCATGTAGAGGCGTCCTTCGATCCTTCCACGGGTGAGATAACGTTCAGCAGTTCATCAACAACCTGCTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022142

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA022142&oldid=44667"