BGIOSGA022154

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Revision as of 13:13, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022154| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022154, complete gene.| tag = P0514G1...")
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Gene Name

BGIOSGA022154

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022154, complete gene.

LocusTag

P0514G12.19

Ensembl Transcript ID

BGIOSGA022154-TA

Ensembl Protein ID

BGIOSGA022154-PA

Length

5394

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:558205..563598

Sequence Coding Region

558205..558368,560026..560290,560415..560788,562334..562415,562539..562600
,562732..562873,562949..562990,563239..563280,563491..563598

Genome Context

<gbrowseImage1> name=IndicaChromosome06:558205..563598 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:558205..563598 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGCGGATCGAGGACACGACGAGGCGGCAGGTGACGTTCTCGAAGCGGCGGAAGGGGCTTCTGAAGAAGGCGTCGGAGCTGTCGGTGCTGTGCGACGCGGAGGTGGCGCTGCTCGTCTTCTCCCCGCGCGGCCGCTTCTTCCACTTCGCCTCCGCTCCCTCGCATGGCTACCTCCTTGTTGTCATCAAGGAGGGCCAGCTCCTTGCCGGCGGTGGGCGACCGGTTGCAGCAACGCTGGGGACGGCGGTTGCAGCGGCGCCGGGGACGACGGTGATGGGGACGGAAGCGCTAGGACACCGGCAGTGGAGGGGCGGTGGGCGGTTGGACGATGCGGCGGTGCTGCAGGCAACGAAGCCAGGACGCCGGCGGTGGAGGTGTGGTTGGCAGAGCATGGGGAGGGCGGCGGCGCTGCGGGCGACGGCGCCAGACACCGACGATGGAGGCATTGTGAGCGGAGGATGGGGAGGGCGGCGGCGCGGCGGGCGACGGCGCCAGGACGCCGGCGGTGGAGGCGTAGTGGGTGGACGATGGGGAGGATGGCGGCACAGCAAGCGACGGCGCCAGGACATCCGCGGTGGTGGCGTGGTGGTGAACGACGGGGAGGACGGCGGCGCGGCGGGCGACGGGGTCAGGATGTCCGCGGTGGAGGCTTGGTGGGCGGACGAAGGGAAGGGCGGCGGCGCTGCGGGCGACGGCGCCAAGATGCTTGCGATGGAGGCATGGTGGGGGGCGGCGCCAGGACGCCGGCGGTGGAGTCGTGGTGGCCGGATGACGGGGAGGGCGGCGCCTGGTCACCGGCGCCTGGAGGGGACAATCGACCGCTACATTAGCCACACCCAAGAGGCGCCTGCAAACAAGAAGCCCCGTGAACTTACTGTAAAGAATATGAAATCTCAATCCGAAACCTTAGCAATGGAGATTGACACAGTTGAGGCATACACAAGGAAGATGCAGGGCGAAAACCTGGAATCATGCTCGTTGCAAGAACTGCATGGCCTGGAGATGCAGATGGAGAAGAGCCTAAGCAGCATCCGTTTACAAAAGGCAAGCAAATGGTCGCAATGTGCTATCTATGTTGTTGCTGTTCAAAAGAAGCTGATGGATAAGATTTCACAGCTACAACAACAGGAGAAGATTCTGTCGGAGGAGAACGCACTGCTCCTCGATCAGGGCAAGGTGCAACATGCTCCAATCGGGGCTCCAGCGCGCGAGATGAATCAGAACCAGCATGTCCAGGATATTGATGTTGACACTGAGCTGGTCATTGGAAGACGGTGA</cdnaseq>

Protein Sequence

<aaseq>MRRIEDTTRRQVTFSKRRKGLLKKASELSVLCDAEVALLVFSPRGRFFHFASAPSHGYLLVVIKEGQLLAGGGRPVAATLGTAVAAAPGTTVMGTEALGHRQWRGGGRLDDAAVLQATKPGRRRWRCGWQSMGRAAALRATAPDTDDGGIVSGGWGGRRRGGRRRQDAGGGGVVGGRWGGWRHSKRRRQDIRGGGVVVNDGEDGGAAGDGVRMSAVEAWWADEGKGGGAAGDGAKMLAMEAWWGAAPGRRRWSRGGRMTGRAAPGHRRLEGTIDRYISHTQEAPANKKPRELTVKNMKSQSETLAMEIDTVEAYTRKMQGENLESCSLQELHGLEMQMEKSLSSIRLQKASKWSQCAIYVVAVQKKLMDKISQLQQQEKILSEENALLLDQGKVQHAPIGAPAREMNQNQHVQDIDVDTELVIGRR</aaseq>

Gene Sequence

<dnaseqindica>1..164#1822..2086#2211..2584#4130..4211#4335..4396#4528..4669#4745..4786#5035..5076#5287..5394#ATGCGGCGGATCGAGGACACGACGAGGCGGCAGGTGACGTTCTCGAAGCGGCGGAAGGGGCTTCTGAAGAAGGCGTCGGAGCTGTCGGTGCTGTGCGACGCGGAGGTGGCGCTGCTCGTCTTCTCCCCGCGCGGCCGCTTCTTCCACTTCGCCTCCGCTCCCTCGTACGCCACCATCCCGCCCTCCTCCTTCTTCCCTACTACTGTACTAGCTTATTAATTCCCTAATTTTTTACTAAATTACCTCATGATATTTTTCATCTTTCTAATCTGTTTTTCACCCTTATTATTCCCCTAGCTAGTTCGATCCGTACGTGCCGGATTTAAAGATGGTGTCACGAGCTACTACATGAAATATACTGTTTCTGCTTCTCTACTAGCTGGAGTAGCAGCGTACTACTAGCTTTAATTTGATATCAGATGGATTTGATAGATCGATCCATTTTATTTTCTCACCTCCACACTGTAAATTGCGTCATACTTCCTCCGTCCTAAAAAAAAAGGTAAACTATGGGTTTACGTGCCCAACTTTGTCTTATATGAAAATTTTTTTATAATTCGTATTTTCATTGTTGTTAGATGATAAAACATGATTAATATTTTATGCGTGACTTGTCTTTTTAATTTTTTTCATAATTTTTTCAAATAAGACGAACGGTCAAACTTTGGTCACGAAAACCAGGGTTTGTCTTTTTTTAGGATGGAGGGAGTATATAGCTTATAAAATCTCAGAATTATATATGCAATCTACAACTACTATATATGGAGTAGCTACTATTTCCTAGTAGTACTATATATTGAATTGATATGTCATTCATTTCTATCACACATTGCTTTTTCAATTAATACACCAAACCACCACCACATTTACATATGCATAGGCATTATTTTATTTTTTTCTCATTTTCTATATATCCATCGGCCATAAATATACAGACACATGTACACGTAATTCTGTTTTTTGTGACAAGAGAGATCAATTAACTAATTTTATGTTTTATAATTATAACTGTGCAAACAAAATATAATGCATGCTAACACCAATAATAATGTAATACCACACGTTTTATGCCATATAATGTTTCACAAAACCATAGCCTTAACCAAATTACATTACTACTTGTTGATGTCAAATTAGAGGTATAGCGATTACACAAAGCATTCATATAAAAAAAATGAGGGCAAATTAAATCCATTGCAAATTGTTTGAGCTGCGGCAGATCACAAGCTATGAAAAAAAATATAATGAACAAATACGCCAAAACTAATTTTATGAATATAAATTCTATATCTGTGTTATTATTAGTGGTTTAAAACCCATTGCTGAAAAACATATTAAGATGAAATAACTTTAAAATTAACTCTATAATTAAGTTTTAAAATTCAAAATTTGGCTATGACTAATAAGCACGATCGATGAAGAGACTACATAATTAACATGAACTATTTGTCATTATAAGATCATCAAATTGTTGGCATGTCAGCCTTCTTGCATGGCCCAAAGCATCATACTTTCATGTCAACCCTTTTTCGTGTGAAACAAGGAGGTAAGTCAAATATAGGTGCTAATTAAACATGCATGACTCATTCCTTGCAGGGGTGTATGGGGGAACTTTTGGTCATATATAGAGTGTTTTAGATAGTATATAGAGAGAATCTACTCAGTACCACTGAGTTTGTCACCCTTCTACAATCTACCACTGACATTGTAAAGCTCTATAATGTACCACCGTGTTCTGTAAAACTCTAAAATGTGCATCACGTCTAGTTAACCTCTGTTAGAGCTTTAAAAAGACCTATTTGCCCCTAGCCCATTCTACAGGCATGGCTACCTCCTTGTTGTCATCAAGGAGGGCCAGCTCCTTGCCGGCGGTGGGCGACCGGTTGCAGCAACGCTGGGGACGGCGGTTGCAGCGGCGCCGGGGACGACGGTGATGGGGACGGAAGCGCTAGGACACCGGCAGTGGAGGGGCGGTGGGCGGTTGGACGATGCGGCGGTGCTGCAGGCAACGAAGCCAGGACGCCGGCGGTGGAGGTGTGGTTGGCAGAGCATGGGGAGGGCGGCGGCGCTGCGGGCGACGGCGCCAGTATGCCGACGGTGAAGGCGTGGTGGGCAGAGGACGGGGAGGGCGCCGGCGCTGCGGGCGACGGGTAGGGCGGCGGCGCTGCGGATGACGGGGAGGGTGGCAGCGCTGTGGGCGATGACGCCAGGACACCGACGATGGAGGCATTGTGAGCGGAGGATGGGGAGGGCGGCGGCGCGGCGGGCGACGGCGCCAGGACGCCGGCGGTGGAGGCGTAGTGGGTGGACGATGGGGAGGATGGCGGCACAGCAAGCGACGGCGCCAGGACATCCGCGGTGGTGGCGTGGTGGTGAACGACGGGGAGGACGGCGGCGCGGCGGGCGACGGGGTCAGGATGTCCGCGGTGGAGGCTTGGTGGGCGGACGAAGGGAAGGGCGGCGGCGCTGCGGGCGACGGCGCCAAGATGCTTGCGATGGAGGCATGGTGGGGGGCGGCGCCAGGACGCCGGCGGTGGAGTCGTGGTGGCCGGATGACGGGGAGGGCGGCGCCTGGTCACCGGCGGTGAGGATTCGTGAAATTTGGGCTAGGTTTTAGTCAATTAGTCAAAGGGCATTTCAGGCATTAAGAGAAAAATCAACGCTACAAACGGAGGGCAACTAACGGTTCGCTGACGGCGATGGTACGCAGTAGAGATTGAACAAAAAACGATGGTATATTATAGAACTTTACAAAGTCAATGATAGATTGTAGAAGGGTGACAAACTCAATGGCACTGAGTGGATTTTCTCTAGTATATATCAGAGCACAATTAACCGTCGCTACAAGCTAGCCATATTCTTGTGGCCTTTTAATTCCCACGCACTGAGATAGGCGTGGTATGCATGTTTATATGCTGCTGAGGACACATCAAACCGGCCTTAAAATGGTGTAAGTATGATGCCCAAGCCGTGTAGTATCATATTTGCTTGTAAGTTTAACATGATACACTAGCTACCTAACATACTACACTACATCAGAGAGGGCCAATTCAGAAACTATATGTACTATTATATGTATGTCATATATAGATCTAGATCAACGCTTGATATATCATAGACTCTAAGGACAACTATTTGCCTATGAAGAAATATCACTATATATTAAACCGTTTGACAAAGGGAACAATCTAAGCTCCTTGCAATTGGAAACACTATATGTGGTAGTAAGCTGATAGCCTATTTACCATAGAAAACATTTAATTATTAGAAATGGTCTATGGTTAGTGAAGACATTATACAGACAGTTTACAAAACATGTCATAAATATTTCATGTTTAGGGAAAGTTTCTGTCAAACTTTTAAAACTTTAACTATTAATATATACTCCCTTCGTCCAAAAAAATGAATCTAGAACTAAATGTGATACATTTTAATACAACGAATCTGGACAGAGATATGTCCAGATTCATAGTAGTAGGATGTGTCATATCCAGTCCTACATTGTTTTTTTATGGGACGGAGAGAGTATTTTATATTAGAATATGTTTACAAAGTAGTATTATTATGACATTACTTTGCAAGGCAAATCCTCCTCTTTTTTCTTAAAACAAAACAAATATAAGCATTACATCTGAGAAATTATGTCAAAGTTTCAAATATTGTTTGACCAAATCTTATCCTAAATGTCAAATATTTCTGACAGGAGGAAGTATCAATTTATTTCATGTCTTATATTAATTGATGTTTTTTAGTATACTAGTTTCAATTAATTTGTTATCAGATAAATTAAATGTCAATGGTGGATCCTTAATTCATCATCTATAATGCTTCCTAGAATTAATGGACATCCATTTACAATTTAAGTTTGTTGAGAATAGTCAGTTTCATGTACATATGTAGTGGTATCTATTCTTGCTGAAATTTGTATTGTTTTTATTCGTTTCTGATACCGGTATCTTATTAGGCACAAATTAACGTATATAAGTACCGCTGCTATTTTTAGTGAAAACATTACTTTGGTCTGATATCCAGTAGTAGTACGCTCAGTTACTTGATTATGAACACATATATATTATCTGTATTTCCATGTAATAAACTATTTTTCACAACTCTGGAATTCTTTTTTCAGCCTGGAGGGGACAATCGACCGCTACATTAGCCACACCCAAGAGGCGCCTGCAAACAAGAAGCCCCGTGAACTTACTGTAAAGGTCCTTGTGGATACATTCTGAATTCCTCATATCTATCAACCATGATCATATACTGTTAGGATCGATGACGATAATGTGTGCAACTTGCATTAATTTTTTTTTCTTCACAACTACTGCATACAGAATATGAAATCTCAATCCGAAACCTTAGCAATGGAGATTGACACAGTTGAGGCATACACAAGGTAACTATAATAGCAATGATTATTCCTTATCAGAATATATATGAAATCATGCAGACTGGCAATTACTATATGTTCCTAATTATTAGGGTGGGGAAATTCACATGACTAGATGAAAATGATTTTTCACGTAGGAAGATGCAGGGCGAAAACCTGGAATCATGCTCGTTGCAAGAACTGCATGGCCTGGAGATGCAGATGGAGAAGAGCCTAAGCAGCATCCGTTTACAAAAGGCAAGCAAATGGTCGCAATGTGCTATCTATGTTGTTGCTGTTGTGAATATCTCTATGATATATGCATTTTGATCAGATTTACATAAATATCTTTCTTGTTGTCCGTCAACATTGCAGCAAAAGAAGCTGATGGATAAGATTTCACAGCTACAACAACAGGTATGCACTTATGTATCTGAATATAATATATATCAAAGCATGGCTGACAAGAATTATTGTTCTGAAAGAGGATTTTTGCATAACTTGTTAGTAATACATCAGTATGATTAGATGGAAACACTTGTTCGCCTCAACAAGCCGTCTCTTCCTGGAGTGTACTGCTTTACAAAAGATGTTGATACAAATACAAATCTCAAAAGATTATCTATATATCCATGTGTGATTAACTGACGAAACTGAACATGCAGGAGAAGATTCTGTCGGAGGAGAACGCACTGCTCCTCGATCAGGTATCATTAAAAAACTCATCATCAACCACACGCCTATTTACTGCACCTACTAGCTGCCGGATTAATCTGCCAATAATGTCACTGACATGTGGGGCAAAAGGCGCTATCTATCCAATGCAACTTACAGTGACCGGTGTTAATATCCATCTATACATGTCAGCTTTTGCATGATGATGAATCTTTTCTTCTTGTTCGTTCTTGTTTGTGGAGGGCAAGGTGCAACATGCTCCAATCGGGGCTCCAGCGCGCGAGATGAATCAGAACCAGCATGTCCAGGATATTGATGTTGACACTGAGCTGGTCATTGGAAGACGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022154