BGIOSGA022160

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Revision as of 13:13, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022160| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022160, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA022160

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022160, complete gene.

LocusTag

OSJNBA0004I20.7

Ensembl Transcript ID

BGIOSGA022160-TA

Ensembl Protein ID

BGIOSGA022160-PA

Length

3553

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:623034..626586

Sequence Coding Region

623034..623224,623314..623376,623477..623593,624164..624578,626180..626331
,626442..626586

Genome Context

<gbrowseImage1> name=IndicaChromosome06:623034..626586 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:623034..626586 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGGAGGGCAGGATGCATGGAGCAATGGATGCCGACGGTGTCAATGGTCGCCACCAATGTTGTGATAGCCATCATGACAGCCTTGATCAAGCAAGCACTCAACCAGGGGATGAACCGCCTGGTCCTCATTACTTTCCGGCAAATGGTGGCTACTGTATTCCTTGGCCCCATAGCCTACTTCAAGGAAAGGAAGACAAGACCAAAGTTCACAACTGAAATCTTTGTCTACATGTTCTTAAGCGGAATGCTTGGGCCGGTGCTTCTTCAGTATACACTGTTTGTAGGGCTGGAGTTTACAACAGCAACATTTGCTGCAACTTTCGGCAATTTGCTTCCGGTGGTTACTTTCTTGATTTCACTCGTTTTCAGGTTTGAAGCACTTAATGTAAAGAGCAGATCAGGGAGTGCCAAGATCTCAGGAACATTGGTTTCTCTCAGCGGAGCAATGATGCTCACCTTCTACAAGGGCTCAGCACTGACCCATACACCATCATCTAGCAGTAGTCCAGCATCCAGCAGTAGCCACTGCCAAGCTGAAGAACATGACACGGCCCATTGGGTGCTCGGTTCCGTCTCGATGCTCGCGAACGTAGTTGGGTTCGCATTGTGGCTGATGCTGCAGAGGAAATTCACCAGGAAGTACCCAGCAATCTACTCTGCTACTGCATTCATGTCATTGTTCAGCTGCTTGCAAGCAGGAGCACTTGCCTTGTCCATACAAAGGAGCAGCATCTCAATCTGGGCTCTCAAGGGGAAAATAGAGATAGCCACAGTTGTATATTGTGGTGTAGTGGCGTCTGGCTTTGGGTACCTGATGCTCACATATTGTGTGGAGAAGAGAGGCCCTGTTTTCACCGCTGCCTTCAGCCCTCTCTCCCAGATCTTCGTGGCCGGCATCGATCTCTTCATCCTCCACGAGCCGCTCTATCTTGGCAGTGTGTTAGGGTCAGTCCTGGTGATTGTGGGGCTCTACCTTGTTCTGTGGGGCAAAAGGGAGGAGACCACCGCCGTCAGCAAAGATGCCATTGCTTCGCCGGAGAAGCCAGTGCAAGACGTAGAACAGCAGCAAGAGAAAGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MWRAGCMEQWMPTVSMVATNVVIAIMTALIKQALNQGMNRLVLITFRQMVATVFLGPIAYFKERKTRPKFTTEIFVYMFLSGMLGPVLLQYTLFVGLEFTTATFAATFGNLLPVVTFLISLVFRFEALNVKSRSGSAKISGTLVSLSGAMMLTFYKGSALTHTPSSSSSPASSSSHCQAEEHDTAHWVLGSVSMLANVVGFALWLMLQRKFTRKYPAIYSATAFMSLFSCLQAGALALSIQRSSISIWALKGKIEIATVVYCGVVASGFGYLMLTYCVEKRGPVFTAAFSPLSQIFVAGIDLFILHEPLYLGSVLGSVLVIVGLYLVLWGKREETTAVSKDAIASPEKPVQDVEQQQEKV</aaseq>

Gene Sequence

<dnaseqindica>1..191#281..343#444..560#1131..1545#3147..3298#3409..3553#ATGTGGAGGGCAGGATGCATGGAGCAATGGATGCCGACGGTGTCAATGGTCGCCACCAATGTTGTGATAGCCATCATGACAGCCTTGATCAAGCAAGCACTCAACCAGGGGATGAACCGCCTGGTCCTCATTACTTTCCGGCAAATGGTGGCTACTGTATTCCTTGGCCCCATAGCCTACTTCAAGGAAAGGTACCAAAGCAAAAGTATAACTATAATAATAAAGTACTGCCAACTACTAGTCGCTTGTGTTTTACTGTTGCTGATCACTGATTTTTCAGGAAGACAAGACCAAAGTTCACAACTGAAATCTTTGTCTACATGTTCTTAAGCGGAATGCTTGGGTAATCATTTGACAAATACTATATTATATGTAGAGAGAGTTGGATTTCACCATTCATTGATACCCCTGGATCAATTGTTTCTTTGACTTGCATTCATCAGGCCGGTGCTTCTTCAGTATACACTGTTTGTAGGGCTGGAGTTTACAACAGCAACATTTGCTGCAACTTTCGGCAATTTGCTTCCGGTGGTTACTTTCTTGATTTCACTCGTTTTCAGGTAACTACAATTTCTTTGAGAAATCTGGAACTCTTTTCACTGAAGAGCACTTTGTCCTCTATATATGTCTCTCTTTAAGTAGCTCAATATCAGGCAAGCAGTTACATTTGCTACTATCTACTACTCCCTCTGGTTTTTAAGATACGGCGCAATTGACTTTTTTTTTTCACAAACTTTGACCAGTAATATTTATTCAATTACTTATTCAAGTAAAGTAAAAGGACTACCACTAGATCTCTCATAAAAAATACTTTAAGCGTGCGTAATATGCTTGTGCAAATACTTCTAGATAAAAATGAATTCAAAAGGTCAACTGTGTCATTTTTTTTAAAAAAAAACAGAGGTAGCATATGTTAATAGCTTTTCATTTGAAGTTGTACTACAACACCTTAAAATCAACTAAGGCCCCAAAGCACCTAAAAGGAAACTCCAGCTTTGTTGCCCAGCAGAAAGAAAATTGCATTGGGTCCTAAGGCACCTTCAACTCCTCACATGCTTTTGGATTTTTTTTTTCAGTGAAACACAAAAGCAGTGAAGTACTTCTCACAAATTAGTTCCAATTCTTTATAGGTTTGAAGCACTTAATGTAAAGAGCAGATCAGGGAGTGCCAAGATCTCAGGAACATTGGTTTCTCTCAGCGGAGCAATGATGCTCACCTTCTACAAGGGCTCAGCACTGACCCATACACCATCATCTAGCAGTAGTCCAGCATCCAGCAGTAGCCACTGCCAAGCTGAAGAACATGACACGGCCCATTGGGTGCTCGGTTCCGTCTCGATGCTCGCGAACGTAGTTGGGTTCGCATTGTGGCTGATGCTGCAGAGGAAATTCACCAGGAAGTACCCAGCAATCTACTCTGCTACTGCATTCATGTCATTGTTCAGCTGCTTGCAAGCAGGAGCACTTGCCTTGTCCATACAAAGGAGCAGCATCTCAATCTGGGCTCTCAAGGGGAAAATAGAGATAGCCACAGTTGTATATTGTGTAAGATCTCTTCCAGAGCTCCCCAACCATATTTTGCAGCATTTCTTTTATATACTTTTTGTCCATTTTGTTTGGCATAGTCGAAAAGTACCAACTGAAAATAGAACTAGCCCCGCCTACTTTTCTTCTTCTTTTTTTGTTTGAAGCTGCATACTTAATTTGCATGTGCACTCTTCTAAAAGAACTCTAGACAAAACATAGAGCATGCTAAAATATTTGCACACATGAAACATATGTACTATAATATAAAGAGAAATAAATCAACAACTTTCATATCTTTCTGTATGTTACACAAATAATCATTCGTGCACGTATTATAAAATTCTCTACATTATTCTTTTAAACAAAATCCAGTTAGGTGTACATAATTAACTACATCCACACTCAAAGAACCCATAATCTTCTCCGGTGGATAGTTTCTTATCTACAAAAGATACCTTTTGTAAAAAAAGAAATGAAAAGGAAAGAAAGAGAGGGGAGAAGATAGTGTTCATTGGACCAGTATATTATATGGGATGGATGGATCCATCCTCCACACCATGCATCATGGACCAGACCTTTAGGATAACATTAGCCCCGATTTGAAACAAATTATTCAACAGATTATCTACTTAATTGTAGGAATAAATTAAATATTTTTAGAAATAAACTTAATAAATAGCTTCGAACAAGTGGCCTAAGCAATGTAGTAGAAGAAAGTTTTTTTTTTTAAAAAAATAGAGATGTGGAGCAAATAATCCGCCATAATAATCCATGAAGTAACTGAAAAGAACAAGGCCAGATCATTATAAACAGTTTTCAACTCTTCTTTTTCAATGTACAGAGATCCTTCTACAAAGCCTTATTTGAAAAGAAAAAGGTCTAACTTTCAAGTTTCAATAGAAAGGGATTGGTTACCACTCAAACCTGTCTTTATGACTTGAACCGTTTGCACAGGGGGTCAAATTGTTCCCTTTTTACTAGGATTCTTCCCCTTCTATAGATTTTTAATCCCTACATAAAGGTATAAATCTAACATATTTGGAGAGATTATTCCAGGATAGCCAGGTGAAAAAAGAAAATTTAGCCCGGCGAAAAAGAGATTATTCCAGGATAAAGAACTTACAATATATTAAATTGATAAGCCTATTGGTTTCTAGCGTGCAGCTTAAAAGATCTTTACTGAAACATGTCCTATGGTCCTTTAGAAGTATCAGATTTTTTAAGTGTAAATTTTGATACCTCCCAACCATGAGCATGATGGAATTGTACAATGGGACATAGGGGTGGAATTGTATCCCCAAAGTTTTTGGCAAACAATATGCAATCAAGTAGGCATAATATGTATATAGACCATTAGATAAAAAAGAATTATTAAGCCCAAAATCACCATTTCCAATATATTATAGTTTATTTTGAGTATATAATTTTATCTTTTTGTTCTATGCAAATAATTTTTATTTGCACTAGTAACAAAAACTAGCACCTCATTTTCTGAAGTTCTGTTGCTCCTATTTCAGTCAAAAAGTGGTATGGTGCTCTTCTAGCACTGATGTAACAAGAATTTGCGACATATCGAATAACAAAATGTGGGCATTGCATTTGTTCTGTGAAATTTGCAGGGTGTAGTGGCGTCTGGCTTTGGGTACCTGATGCTCACATATTGTGTGGAGAAGAGAGGCCCTGTTTTCACCGCTGCCTTCAGCCCTCTCTCCCAGATCTTCGTGGCCGGCATCGATCTCTTCATCCTCCACGAGCCGCTCTATCTTGGCAGGTACTAATTCTTAATTAATTTCTAGCACAAACGAATTGATTGATTCATTCATGATTCCATACGTTACTGATTGTTGGTATGGCACTAAAAGAATAGTTAATTTTTTGCAGTGTGTTAGGGTCAGTCCTGGTGATTGTGGGGCTCTACCTTGTTCTGTGGGGCAAAAGGGAGGAGACCACCGCCGTCAGCAAAGATGCCATTGCTTCGCCGGAGAAGCCAGTGCAAGACGTAGAACAGCAGCAAGAGAAAGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022160