BGIOSGA022216

From RiceWiki
Revision as of 13:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022216| Description = Zinc finger proteinZinc-finger protein| Definition = Oryza sativa Indica Group BGIOSGA022216, complete gene.| tag = P...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022216

Description

Zinc finger proteinZinc-finger protein

Definition

Oryza sativa Indica Group BGIOSGA022216, complete gene.

LocusTag

P0425F02.32

Ensembl Transcript ID

BGIOSGA022216-TA

Ensembl Protein ID

BGIOSGA022216-PA

Length

1753

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1546640..1548392

Sequence Coding Region

1546640..1546789,1546996..1547239,1547358..1547425,1547610..1547657,1547754..1547878
,1548027..1548135,1548351..1548392

Genome Context

<gbrowseImage1> name=IndicaChromosome06:1546640..1548392 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:1546640..1548392 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCGTGGGGCAGCCTGATGCCATGAGAAGGATCACCGTTCACTACGTGAATCCGCCGCCGATCGCCGGCGCCGGAGAAGCACACGTCGATGGCCTCGACGACGAGGTTCTTGATTATGTGATTGGTGATGTTCTTCAGGATCAGGAGGGTCTGTATCAATCGATATTGTATGGCAAATACGGGGATGACATGAGAGGGGCAAGAAACACTGCTCTTGCCCAATCTGATGGTTTACATTACTACTATCACGGAGAGAACAGCAGTGGTGAAGCAACAACCTCGAGAAATTCAGAAATCGACCAACAGATTGAGTATGACTTGGTGTTCGCTAGGCAGCTGCAGGCAATGGATAATCTGACAATTGAGACACCTGCAGATGAAGATGATGATATAAGCTGCGTACCCTCTCCATCTGACTCTGAAACCGATGAACCGGCAGAAGGCAACAACGAAGAGGCTGCCACACAGGATGATAACGATGATCCAGACAACATGACATACGAGCAAAGGCAGGCACTTGTGGAATCTGTAGGAAATGAGAACAGAGGTTTATCTGATCTGCTTATCTCCTACTTGGAGACATGGAAGTACAAATCAGGCTTTTTCCCAAGGAAGGCAAACCATGATAACTGTCCTATATGTCTATCCGCTTTCAGACGCCGAGAAACACTCATTACATTGGCTTGCAAGCATAGTTACCATGAAGGTTGTATTGCTAGATGGCTCAAGATTGACAAGGCCTGCCCAGTTTGCAAATATGAAGTGTTTGGACCTTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MATVGQPDAMRRITVHYVNPPPIAGAGEAHVDGLDDEVLDYVIGDVLQDQEGLYQSILYGKYGDDMRGARNTALAQSDGLHYYYHGENSSGEATTSRNSEIDQQIEYDLVFARQLQAMDNLTIETPADEDDDISCVPSPSDSETDEPAEGNNEEAATQDDNDDPDNMTYEQRQALVESVGNENRGLSDLLISYLETWKYKSGFFPRKANHDNCPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVCKYEVFGPS</aaseq>

Gene Sequence

<dnaseqindica>1..150#357..600#719..786#971..1018#1115..1239#1388..1496#1712..1753#ATGGCCACCGTGGGGCAGCCTGATGCCATGAGAAGGATCACCGTTCACTACGTGAATCCGCCGCCGATCGCCGGCGCCGGAGAAGCACACGTCGATGGCCTCGACGACGAGGTTCTTGATTATGTGATTGGTGATGTTCTTCAGGATCAGGTATGCATTTGATCCAACCTTTCCATCATTATTAGCATACTGCTCTTACAGGCTTGCAGAATGATGAGCTTTAGCATCAAACATATGTTTCTAAGCCTTTGATATGGCCTCTTTACTTTAGTTCAACATTGTTTAGTAAACTTTCCACTGTTTCTCTGAAACTTTTTTGAGAATAAACTTATTTGTTTTTCTGAACTTTTTTCTAGGAGGGTCTGTATCAATCGATATTGTATGGCAAATACGGGGATGACATGAGAGGGGCAAGAAACACTGCTCTTGCCCAATCTGATGGTTTACATTACTACTATCACGGAGAGAACAGCAGTGGTGAAGCAACAACCTCGAGAAATTCAGAAATCGACCAACAGATTGAGTATGACTTGGTGTTCGCTAGGCAGCTGCAGGCAATGGATAATCTGACAATTGAGACACCTGCAGATGAAGATGATGGTATGCATTCATTCTCGTTCAGTTTTTGTAAGCACTTGATGTGCATAATGATTTTCAGTCGTGGCAATCTTAATCTTTTCACCTCTGAAATTTTGTTGCCCATGTTGGTTTGATTCAGATATAAGCTGCGTACCCTCTCCATCTGACTCTGAAACCGATGAACCGGCAGAAGGCAACAACGAAGAGGTGATTATATGAGCTGTTTCAGAATTGCAATTATTCAGCATTGTTCGTTTCAGACTTCTTGATGCAAAGATACACAATTGCGTATTCACTAAAAAGATGAGCTGTTTCAGAATAAAGCCTTTCCAAATGGATAATGTATAAACATGTACTACGAAAAGTTGAGATTCCTATCATTTGTTTGCAGGCTGCCACACAGGATGATAACGATGATCCAGACAACATGACATACGAGGTTAGTGTTATATTCACTTGTATCACATTTCTTCTGTAAAAGAGGTTTACACCATCTATGAAAAAGTTGCTGATTCTTATTCTTTCTGTAATCCAGCAAAGGCAGGCACTTGTGGAATCTGTAGGAAATGAGAACAGAGGTTTATCTGATCTGCTTATCTCCTACTTGGAGACATGGAAGTACAAATCAGGCTTTTTCCCAAGGAAGGCAAACCATGATAAGTATGTCTACCATTTCAGTTTTCAATCAATCACATACTGATTTCTTGCAGAAGATAATCCAAGCATGTAACTGATGACACTCTGATTAAAATCTTCATCATGGCATGCAACTGATGATTTCCTCCTCTTTTTTCTCCCAAAATTGCAGCTGTCCTATATGTCTATCCGCTTTCAGACGCCGAGAAACACTCATTACATTGGCTTGCAAGCATAGTTACCATGAAGGTTGTATTGCTAGATGGCTCAAGATTGACAAGGTAAACACCTTCTTGGGACACTAGATTTGCTATCTGAATTGTGTACCTATCTTAGATTATACCATTTGTCAAAGTTTACATGAGCACTGATATGCACTGTCCATTTCATATAACAAGATGGTCTTTGTCTTTCAGTTTCCTTGAGCTTCTTCCAAATTAAAAGAACTTCATGGGCTTGTGCAGTGGAATTCCTGACATTTTTGTTTATGAAACAGGCCTGCCCAGTTTGCAAATATGAAGTGTTTGGACCTTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022216