BGIOSGA022217

From RiceWiki
Revision as of 13:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022217| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022217, complete gene.| tag = P0425F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022217

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022217, complete gene.

LocusTag

P0425F02.41

Ensembl Transcript ID

BGIOSGA022217-TA

Ensembl Protein ID

BGIOSGA022217-PA

Length

1308

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1577063..1578370

Sequence Coding Region

1577063..1577360,1577449..1577705,1577807..1577953,1578053..1578370

Genome Context

<gbrowseImage1> name=IndicaChromosome06:1577063..1578370 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:1577063..1578370 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGGGAGCGAGCCCTAAGGCCAAGAAAGGCGCGACGGTGAAGTTCGGGTCGATGAAGAATCCTCCTCCTCCCCCGGTGGTTGGCGCCGCCGCCGGAGCAGCGGCGGCGGCGGCGGGTGGGAAGGTGCCGGCGGAGGAGGTGTGGGAGGTGCGGCCAGGCGGGATGCTGGTGCAGAAGAGGGGCGGCGGCGCCGACGAGGAGCCCGTCAACGTGAAGCCGGTGCCCACCATCCGCGTCAAGGTCAAGCACGCCGGCATCACCCACGAGATCTACATCAACTCGCAGGCGTCCTTCGGGGAGCTGAAGAAGATGGTGGCGGCGCGAACGGGGCTGCATCCGGACGACCAGAAGGTGATGTACAAGGACAAGGAGAGGGACTCCAAGGCGTTCCTGGACATGGCCGGCGTCAAGGACAGGTCCAAGCTGGTGGTCGTCGAGGACCCCGAGGCACGCGCCCGCCGCCTCATCGAGGAGCGCCGCAATGGCCACCTCGAGAAGGCCGCCAAGGCCGTCGCCGCCGTCACCGCCGAGGTCGACAAGCTCGCCCCCAAGGTGGCGGCGCTGGACGCGTCGGTGAGGAAGGGGGAGAAGGTGGCGGAGAACGACGTGGTGCAGGTGACCGAGCTGCTCATGAACGAGCTGCTCAAGCTCGACGCGGTGGTCGCCGACGGCGACGTCAAGGCGCAGAGGCGGCTACAGGTGAAGCGCGTGCAGAAGTACGTGGAGACGCTCGACGCCGTCATGGCCAAGAACGCCGCCATCGTGCGCAAGTCCGGCGAGAAGCTCACCTCCAAACAACACCATCACCCGCCGGCGAGGCAGCAGCAGCAGCAAGCTCACCAACACCATCAGCAGCCGGCGGCGGGGCAGACGCGGTGGGAGATGTTCGACCTGCTGTCCTCGCTGCCGTCGACGTCGTCGGCCTCCTCAACGACCACCGTCAGCTCAACGGCCTCCTCCGGCGCGCCGCCGCCGCTGCCGCCGCCGGCGAACCGGCTCGACTGGATGCTATTCTGA</cdnaseq>

Protein Sequence

<aaseq>MLGASPKAKKGATVKFGSMKNPPPPPVVGAAAGAAAAAAGGKVPAEEVWEVRPGGMLVQKRGGGADEEPVNVKPVPTIRVKVKHAGITHEIYINSQASFGELKKMVAARTGLHPDDQKVMYKDKERDSKAFLDMAGVKDRSKLVVVEDPEARARRLIEERRNGHLEKAAKAVAAVTAEVDKLAPKVAALDASVRKGEKVAENDVVQVTELLMNELLKLDAVVADGDVKAQRRLQVKRVQKYVETLDAVMAKNAAIVRKSGEKLTSKQHHHPPARQQQQQAHQHHQQPAAGQTRWEMFDLLSSLPSTSSASSTTTVSSTASSGAPPPLPPPANRLDWMLF</aaseq>

Gene Sequence

<dnaseqindica>1..298#387..643#745..891#991..1308#ATGCTGGGAGCGAGCCCTAAGGCCAAGAAAGGCGCGACGGTGAAGTTCGGGTCGATGAAGAATCCTCCTCCTCCCCCGGTGGTTGGCGCCGCCGCCGGAGCAGCGGCGGCGGCGGCGGGTGGGAAGGTGCCGGCGGAGGAGGTGTGGGAGGTGCGGCCAGGCGGGATGCTGGTGCAGAAGAGGGGCGGCGGCGCCGACGAGGAGCCCGTCAACGTGAAGCCGGTGCCCACCATCCGCGTCAAGGTCAAGCACGCCGGCATCACCCACGAGATCTACATCAACTCGCAGGCGTCCTTCGGTCAGTGCCCGCCGCCGCCGTCGTCGTCGTCGTCGACGGCGAACTCGATGGATGGGGGCCATGTCTGATTTCGTTGTGGGTGGTGCAGGGGAGCTGAAGAAGATGGTGGCGGCGCGAACGGGGCTGCATCCGGACGACCAGAAGGTGATGTACAAGGACAAGGAGAGGGACTCCAAGGCGTTCCTGGACATGGCCGGCGTCAAGGACAGGTCCAAGCTGGTGGTCGTCGAGGACCCCGAGGCACGCGCCCGCCGCCTCATCGAGGAGCGCCGCAATGGCCACCTCGAGAAGGCCGCCAAGGCCGTCGCCGCCGTCACCGCCGAGGTCGACAAGCTCGCCCCCAAGGTAGGCACCCACCCACATTGCCCGCCATCCATGGCGACGCCGACGCCGAGGTAGTAGGCTCACCTCCGATTGGTTGGTTGGTTGGTTGGTTGGTTCGGCAGGTGGCGGCGCTGGACGCGTCGGTGAGGAAGGGGGAGAAGGTGGCGGAGAACGACGTGGTGCAGGTGACCGAGCTGCTCATGAACGAGCTGCTCAAGCTCGACGCGGTGGTCGCCGACGGCGACGTCAAGGCGCAGAGGCGGCTACAGGTGAGCTGACGAGCTACCTCGCCGCCTCCTCCAATCTCCACCGACTAGCTTGACCGCCATGGTTAATGAGCTCAACCTGTTCGTCCCATGACTCTGCAGGTGAAGCGCGTGCAGAAGTACGTGGAGACGCTCGACGCCGTCATGGCCAAGAACGCCGCCATCGTGCGCAAGTCCGGCGAGAAGCTCACCTCCAAACAACACCATCACCCGCCGGCGAGGCAGCAGCAGCAGCAAGCTCACCAACACCATCAGCAGCCGGCGGCGGGGCAGACGCGGTGGGAGATGTTCGACCTGCTGTCCTCGCTGCCGTCGACGTCGTCGGCCTCCTCAACGACCACCGTCAGCTCAACGGCCTCCTCCGGCGCGCCGCCGCCGCTGCCGCCGCCGGCGAACCGGCTCGACTGGATGCTATTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022217