BGIOSGA022221

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Revision as of 13:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022221| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022221, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA022221

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022221, complete gene.

LocusTag

OSJNBA0038F22.19

Ensembl Transcript ID

BGIOSGA022221-TA

Ensembl Protein ID

BGIOSGA022221-PA

Length

4023

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1623209..1627231

Sequence Coding Region

1623209..1623302,1623411..1623871,1623958..1624055,1625325..1625894,1625974..1626229
,1626311..1626493,1626611..1627231

Genome Context

<gbrowseImage1> name=IndicaChromosome06:1623209..1627231 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:1623209..1627231 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCTCCCATCACCAAGAAGTACAAGAGCAAGGCCATGGAGATGGAGAGGAAGAGGAACAAGATAATAGCCAAATCACCTCTCCACTGTTGCGATCCTCAATGCGGCTCGGCTCGCCGGAGGAGAACTCGCCGGTGGAGCAGGTGGCGCTGACGGTGCCGGTGGGGGACGACCCGGCGACGCCGGTGCTGACGTTCCGGATATGGGTGCTGGGCACGGCGTCCTGCGTCGTGCTGTCCTTCCTCAACACCTTCTTCTGGTACCGCAAGGAGCCGCTCACCGTCACGGCCATCTCGGCGCAGATCGCCGTCGTGCCGCTCGGCCGCCTCATGGCCGCCGCGCTGCCGGAGCGCGTCTTCTTCCGTGGCCGGCCGTGGGAATTCACCCTCAACCCTGGCCCGTTCAACGTCAAGGAGCACGTGCTCATCACCATCTTCGCCAACGCCGGTGCCGGTTCCGTCTTCGCCATTAACGTCATCACCGCCGTCCGAGTCTTCTACGGGAAGCGCATCTCCTTCTTCGTCTCCCTCCTCGTCGTCCTCACCAGCCAGGTGCTGGGATTCGGGTGGGCGGGAATATTCCGGCGGTATCTGGTGGAGCCGGCGGCGATGTGGTGGCCGTCCAACCTCGTGCAGGTCTCCCTCTTCAGGGCACTTCATGAAAAGGAACGGAGGAGCAAAGGCGGCATGACACGCACCCAGTTCTTCTTGGTAGCATTTGTGTGCAGCTTTGCCTACTACATTTTCCCAGGCTACCTATTCCAGATGCTCACTTCCCTCTCCTGGATTTGTTGGATCTTTCCCAAATCTGTGCTCGCACAACAGCTTGGATCAGGTCTCCATGGCCTTGGCATTGGTGCAATTGGACTCGACTGGTCATCCATCTCGTCATATCTCGGAAGCCCACTGGCTAGCCCATGGTTTGCCACTGCCAACATTGCTGCCGGCTTCTTCATCTACATTTATGTAATCACACCAATCGCCTACTGGATTAATCTCTACAAGGCACAAAACTTCCCTATCTTTTCAGATGGCCTTTTCACAGTGACTGGACAGAAGTACAACATCTCTACCATTATAGACTCACAGTTTCATTTTGATACAAAAGCCTATGAGAAGAATGGACCATTATACATCAGCACCTTCTTTTCTATCAGCTATGGTCTTGGTTTTGCATGTCTTACTGCAACAGTTGTCCACGTTCTTCTTTTCCATGGAAGTGAAATTTGGCAGCTAAGCAGATCAGCTTTTCAAGATAAAAAGATGGACATACATACAAAGCTTATGAAGAGGTACAAACAGGTTCCTGAATGGTGGTTCATCTCCATCCTTATAGCCAGTGTTGCAATCACCATGTTCACTTGTGAGTATTACATAGAACAATTGCAGTTACCCTGGTGGGGGGTACTACTTGCATGTGCCCTTGCAATTTTCTTCACCCTTCCAATTGGAATCGTCACAGCAACGACAAACCAGACTCCAGGCTTGAATATCATCACGGAATACATCATGGGGTACTTGTATCCTGGACGACCTGTCGCAAACATGTGCTTCAAGGTATATGGTTACATTGGCCCACAGCAAGCCCTAGCATTCCTACAAGATTTTAAGCTGGGACACTACATGAAGATTCCACCAAGGACCATGTTTATGGCTCAGGTGGTGGGCACTTTGATAGCAGCATTTGTGTACCTTGGAACAGCATGGTGGCTCATGGATACAATCCCTAACATATGCAACACCGAGCTCCTCCCCCCAGGCAGCCCTTGGACCTGCCCTTATGATCATTTATTCTATGATGCATCAGTCATATGGGGCCTTATTGGCCCACGCAGAATATTTGGTGATTTAGGCACTTATTCTGCTGTCAACTGGTTCTTCTTGGGGGGTGCCATTGCTCCCCTCCTCGTCTGGTTTGCACACAAGGCATTCCCAGGTCAGAAATGGATCCTACTTGTCAACATGCCTGTGCTGATCGCCGGAATCAGCCAGATGCCTCCTGCCACTTCAGTCAACTACACGGCATGGATATTTGTAGCATTTTTGTCAGGTTATGTGGTCTATAAGTACCGTCGTGACTGGTGGGAGAGACACAATTATCTACTTTCAGGTGCCCTTGATGCTGGTTTGGCATTCATGGCTGTCTTGCTATATTTATGCCTAGGACTAGAGAAAATCAGTTTGAACTGGTGGGGTAATGATTTGGATGGTTGTCCATTAGCTTCTTGCCCCATTGCGGAAGGTATAACTGTACAGGGGTGTCCAGTGGCAAGTGCATAG</cdnaseq>

Protein Sequence

<aaseq>MASSHHQEVQEQGHGDGEEEEQDNSQITSPLLRSSMRLGSPEENSPVEQVALTVPVGDDPATPVLTFRIWVLGTASCVVLSFLNTFFWYRKEPLTVTAISAQIAVVPLGRLMAAALPERVFFRGRPWEFTLNPGPFNVKEHVLITIFANAGAGSVFAINVITAVRVFYGKRISFFVSLLVVLTSQVLGFGWAGIFRRYLVEPAAMWWPSNLVQVSLFRALHEKERRSKGGMTRTQFFLVAFVCSFAYYIFPGYLFQMLTSLSWICWIFPKSVLAQQLGSGLHGLGIGAIGLDWSSISSYLGSPLASPWFATANIAAGFFIYIYVITPIAYWINLYKAQNFPIFSDGLFTVTGQKYNISTIIDSQFHFDTKAYEKNGPLYISTFFSISYGLGFACLTATVVHVLLFHGSEIWQLSRSAFQDKKMDIHTKLMKRYKQVPEWWFISILIASVAITMFTCEYYIEQLQLPWWGVLLACALAIFFTLPIGIVTATTNQTPGLNIITEYIMGYLYPGRPVANMCFKVYGYIGPQQALAFLQDFKLGHYMKIPPRTMFMAQVVGTLIAAFVYLGTAWWLMDTIPNICNTELLPPGSPWTCPYDHLFYDASVIWGLIGPRRIFGDLGTYSAVNWFFLGGAIAPLLVWFAHKAFPGQKWILLVNMPVLIAGISQMPPATSVNYTAWIFVAFLSGYVVYKYRRDWWERHNYLLSGALDAGLAFMAVLLYLCLGLEKISLNWWGNDLDGCPLASCPIAEGITVQGCPVASA</aaseq>

Gene Sequence

<dnaseqindica>1..94#203..663#750..847#2117..2686#2766..3021#3103..3285#3403..4023#ATGGCGTCCTCCCATCACCAAGAAGTACAAGAGCAAGGCCATGGAGATGGAGAGGAAGAGGAACAAGATAATAGCCAAATCACCTCTCCACTGTGTAAGCACGGCAAAGCCTAGTCGTCTCAGCTGTTTTCTTTTTCCCGCCATGGAACACCACTAGAAGAAAGCAAACTGTTCTGTTGCCTGATGAGTTCTTCTCGTGCAGTGCGATCCTCAATGCGGCTCGGCTCGCCGGAGGAGAACTCGCCGGTGGAGCAGGTGGCGCTGACGGTGCCGGTGGGGGACGACCCGGCGACGCCGGTGCTGACGTTCCGGATATGGGTGCTGGGCACGGCGTCCTGCGTCGTGCTGTCCTTCCTCAACACCTTCTTCTGGTACCGCAAGGAGCCGCTCACCGTCACGGCCATCTCGGCGCAGATCGCCGTCGTGCCGCTCGGCCGCCTCATGGCCGCCGCGCTGCCGGAGCGCGTCTTCTTCCGTGGCCGGCCGTGGGAATTCACCCTCAACCCTGGCCCGTTCAACGTCAAGGAGCACGTGCTCATCACCATCTTCGCCAACGCCGGTGCCGGTTCCGTCTTCGCCATTAACGTCATCACCGCCGTCCGAGTCTTCTACGGGAAGCGCATCTCCTTCTTCGTCTCCCTCCTCGTCGTCCTCACCAGCCAGGTAGAGGTGACATCAACGTGCTGCAGTAATAACAGTACAAGGTGTCATGTACACTCATGTTCATGAACTTGAGCTTCATTTTGTAGGTGCTGGGATTCGGGTGGGCGGGAATATTCCGGCGGTATCTGGTGGAGCCGGCGGCGATGTGGTGGCCGTCCAACCTCGTGCAGGTCTCCCTCTTCAGGTAATAAGCAAATAGTAATTCACAATAATTTACTCTCCACATGTGCTATAAATCTGATTATTCAGATATAGCTTGCCTATGATTGGTTAAAAGGAGTTGAATTGCCACTTGTAAAGTAATCTTTCCACCAGTAGAATACATTTTTTTTGCGTCGCATGATGTGTGCAGCCAGTTGCTTGCAATTGATGTGTTAATAAGGTACAGCTAAGTGCTAGACTACCCAAAGATAACCAACCAACCACCTTCCCAAATCTCAAAACCAACGTCAACAAAAAAAAAGATACTTTGAACTTTGAAGGACAAATAAGGGTTTTTATTAAGCTGGTGTTCAAGTCGTATGTTGTGTGAACAGCACTGAATACGATGGCACTGCTATTCAGCAATATGCTAATTATATAAAAAATATTATCTGTCCTATATCATGGTTTTGTCATTTTCATTCATAATAAGCAGAGATATATTGGCACATCATGAATTGTCTAAAAAGTAGATATTGACATAATGACTCAAGCGAACAGGAATCATTTACCAGTCAATTCAATAATAAAACCCACCCAGCATCATCTTCATCTGAATTCTACGCAACAATTAGGAGATTTAGGCGACTTGGACACTCAGCTATGCAAGTGCATGCTGCTGCAGAAAACCAGAATTCCGTGTATTTGGAGATATCCTGAGTAATAAAAGAAGCAGTCAATCAATTTTGACAGATAAAATTCAAAGAAAGAAAACAAGATATATAAAATATCATATCACTTCAATTATAGACGAAGAGCAGCTATTAAAACTATAACAAGATTTTTCGTCCCAAACCAAGGCATAACAATTTTCCATTTACGACCAAGGAAACAAGATCAGTTACAACCAGCAACAAGCATCAACTAAACCTTATACAATATCAAGATTCATTTGAGTAAACCCGACTAGACATTTTAAAACAAGATGTTTACTTCCCTAGAGGCTTCAATGATTTGTCAGAAAAACATGGATACAATTTGTCTGCAAATAAAAAAAAAGGTTCAGCATTTTGTTGAGATGACACTTATAAATCATAATAAGGCATAAATCTGTGTTGCTCTGCCAATGAGTGAATTCATCTAAAACTTTCAGTGGCAATCTGAAAAGTGAGCTTAATAGCCATACTGGACACACTTGCAAATGCAGAATCAAATTAGCAGTAAAATAATAACTTTCTCCGTAGTCAAAGGATGGCTAAAAAAAAACTACCATAGAAAAGTGAATAACAGATTTGCTGCACATGTTCATCAGGGCACTTCATGAAAAGGAACGGAGGAGCAAAGGCGGCATGACACGCACCCAGTTCTTCTTGGTAGCATTTGTGTGCAGCTTTGCCTACTACATTTTCCCAGGCTACCTATTCCAGATGCTCACTTCCCTCTCCTGGATTTGTTGGATCTTTCCCAAATCTGTGCTCGCACAACAGCTTGGATCAGGTCTCCATGGCCTTGGCATTGGTGCAATTGGACTCGACTGGTCATCCATCTCGTCATATCTCGGAAGCCCACTGGCTAGCCCATGGTTTGCCACTGCCAACATTGCTGCCGGCTTCTTCATCTACATTTATGTAATCACACCAATCGCCTACTGGATTAATCTCTACAAGGCACAAAACTTCCCTATCTTTTCAGATGGCCTTTTCACAGTGACTGGACAGAAGTACAACATCTCTACCATTATAGACTCACAGTTTCATTTTGATACAAAAGCCTATGAGAAGAATGGACCATTATACATCAGCACCTTCTTTTCTATCAGCTATGGTCTTGGTTTTGCATGTCTTACTGCAACAGTTGTCCACGTTCTTCTTTTCCATGGAAGGTATCCTCCCCTTCCTTCTCCCTCTAGGTCTATTATGTAAAATTAGATACACAGATAAATTTGTGACACCTGTGTCCAGTGAAATTTGGCAGCTAAGCAGATCAGCTTTTCAAGATAAAAAGATGGACATACATACAAAGCTTATGAAGAGGTACAAACAGGTTCCTGAATGGTGGTTCATCTCCATCCTTATAGCCAGTGTTGCAATCACCATGTTCACTTGTGAGTATTACATAGAACAATTGCAGTTACCCTGGTGGGGGGTACTACTTGCATGTGCCCTTGCAATTTTCTTCACCCTTCCAATTGGAATCGTCACAGCAACGACAAACCAGGTAAGAAGTAAAAGCATAAAGGCAAATGCTAATGCACACATCCAAGTGTAGCACTTCAGCTTATTATACTGTATGTGACAGACTCCAGGCTTGAATATCATCACGGAATACATCATGGGGTACTTGTATCCTGGACGACCTGTCGCAAACATGTGCTTCAAGGTATATGGTTACATTGGCCCACAGCAAGCCCTAGCATTCCTACAAGATTTTAAGCTGGGACACTACATGAAGATTCCACCAAGGACCATGTTTATGGCTCAGGTCAGCTTCACTAGTCACATGAATAAATGGGTGTATTGCTTGTAAAAAAGGAGGATAAGCAGATTATCATTTTATTCAGTGTTGATTATGTCCCTAATAGCAATTCAAAAATAGCAGGTGGTGGGCACTTTGATAGCAGCATTTGTGTACCTTGGAACAGCATGGTGGCTCATGGATACAATCCCTAACATATGCAACACCGAGCTCCTCCCCCCAGGCAGCCCTTGGACCTGCCCTTATGATCATTTATTCTATGATGCATCAGTCATATGGGGCCTTATTGGCCCACGCAGAATATTTGGTGATTTAGGCACTTATTCTGCTGTCAACTGGTTCTTCTTGGGGGGTGCCATTGCTCCCCTCCTCGTCTGGTTTGCACACAAGGCATTCCCAGGTCAGAAATGGATCCTACTTGTCAACATGCCTGTGCTGATCGCCGGAATCAGCCAGATGCCTCCTGCCACTTCAGTCAACTACACGGCATGGATATTTGTAGCATTTTTGTCAGGTTATGTGGTCTATAAGTACCGTCGTGACTGGTGGGAGAGACACAATTATCTACTTTCAGGTGCCCTTGATGCTGGTTTGGCATTCATGGCTGTCTTGCTATATTTATGCCTAGGACTAGAGAAAATCAGTTTGAACTGGTGGGGTAATGATTTGGATGGTTGTCCATTAGCTTCTTGCCCCATTGCGGAAGGTATAACTGTACAGGGGTGTCCAGTGGCAAGTGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022221