BGIOSGA022230

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Revision as of 13:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022230| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022230, complete gene.| tag = P0538C0...")
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Gene Name

BGIOSGA022230

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022230, complete gene.

LocusTag

P0538C01.13

Ensembl Transcript ID

BGIOSGA022230-TA

Ensembl Protein ID

BGIOSGA022230-PA

Length

2743

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1703860..1706602

Sequence Coding Region

1703860..1704222,1704331..1704350,1704734..1704813,1704935..1705094,1705234..1705315
,1705817..1705904,1705993..1706039,1706360..1706602

Genome Context

<gbrowseImage1> name=IndicaChromosome06:1703860..1706602 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:1703860..1706602 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGACCTCGCTGAGATACCTGGCCGGCACGGCGGGGGCGAGCGGCTTCGGGTCGCGCGCCACCGCGGAGGACGCCACCGCGGCCTGCTCCGACCTCCGCCACATCACCGCCATCATCACCGGGGCGACGTCGGGGATAGGGGCGGAGACGGCGAGGGTGCTGGCGAAGCGAGGGGCGAGGCTGGTGCTGCCGGCGAGGAGCCTCAAGGCGGCGGCGGAGGCGCGGGCGCGGCTGCTCGCCGAGTGCCCCGCCGCCGCCGGCGACGTGGTGGTGATGCCGCTGGACCTCAGCTCGCTCGCCTCCGTGCCGCCGCTTCGCCGCCCGATTCCTCGCGCTCGGCCTCCCTCTCAACCTCCTCATCTAGAGGAATTATTTGCATGCAACAACGCCGGCAAGTTCGCCGACCGATTCGCCTTGTCCGACGACGGCGTCGAGATGACCTTCGCCACAAACTACTTGGGGCACTTCCTGCTGACGAAGCTGCTGATGGAGAAGATGGCGGAGACGGCGGCGGCGACCGGCGTCGAGGGCCGCATCGTCAACGTATCCTCCACAATCCACAGCTGGTTCGCCGGCGACGACGCCGTCGGCTACATCGACGCCGTCACGCGCAGGAAGATACCGTACGATCCGACGAGAGCCTACGCGCTCTCCAAGCTGGCCAACGTTCTCCACACGAGGGCACTCGCGGATCGGCTCAAGGAGATGAAAGCCAACGTGACGGCAAACTGCGTCCACCCTGGTATCGTCAGGACCCGGCTCATCCGAGAACGCGACGGCCTTGTCACCAATACAGTCTTCTTCCTGGCGTCCAAGCTGCTCAAGACGATCCCTCAGGCGGCGGCGACGACGTGCTACGTGGCGGTGCACCCGGCGGTGGCCGGAGTGTCCGGCAAGTACTTCGCCGACTGCAACGAGGCGTCGCCGTCGAGGCTGGGATCCAACGCCGACGAGGCCGCCAAGCTGTGGAGATTCTCCGACGAGGTCGCTGCGGAGGAGAAGGAGGAGAGTGTTCATGCCGGCAGCTTCAGGCTCCAGGTTCAGAGCTCCAATGCAGACCGTGGCTTGGCTTTCGCCTAG</cdnaseq>

Protein Sequence

<aaseq>MLTSLRYLAGTAGASGFGSRATAEDATAACSDLRHITAIITGATSGIGAETARVLAKRGARLVLPARSLKAAAEARARLLAECPAAAGDVVVMPLDLSSLASVPPLRRPIPRARPPSQPPHLEELFACNNAGKFADRFALSDDGVEMTFATNYLGHFLLTKLLMEKMAETAAATGVEGRIVNVSSTIHSWFAGDDAVGYIDAVTRRKIPYDPTRAYALSKLANVLHTRALADRLKEMKANVTANCVHPGIVRTRLIRERDGLVTNTVFFLASKLLKTIPQAAATTCYVAVHPAVAGVSGKYFADCNEASPSRLGSNADEAAKLWRFSDEVAAEEKEESVHAGSFRLQVQSSNADRGLAFA</aaseq>

Gene Sequence

<dnaseqindica>1..363#472..491#875..954#1076..1235#1375..1456#1958..2045#2134..2180#2501..2743#ATGCTGACCTCGCTGAGATACCTGGCCGGCACGGCGGGGGCGAGCGGCTTCGGGTCGCGCGCCACCGCGGAGGACGCCACCGCGGCCTGCTCCGACCTCCGCCACATCACCGCCATCATCACCGGGGCGACGTCGGGGATAGGGGCGGAGACGGCGAGGGTGCTGGCGAAGCGAGGGGCGAGGCTGGTGCTGCCGGCGAGGAGCCTCAAGGCGGCGGCGGAGGCGCGGGCGCGGCTGCTCGCCGAGTGCCCCGCCGCCGCCGGCGACGTGGTGGTGATGCCGCTGGACCTCAGCTCGCTCGCCTCCGTGCCGCCGCTTCGCCGCCCGATTCCTCGCGCTCGGCCTCCCTCTCAACCTCCTCATGTACGTGTACTACTGTTAATTATCACCAACTCCTCCCACTAATCACGATCATGCTAATTAATTGTTGGTGCTAATTAGTACCATCAAATAATATTGCACATTGCCTAGCTAGAGGAATTATTTGCATGGTTGGTTTGGTTTGGTTTGGTTTAAATATATATGAGGTGTTTTTAATTAGACTAAATTTCATAAAACTACATATATTTTAACTAAACTATCATAAAACTAAAGTATTACAAATCTACAAATACAATGTTGAAGTTAATACAAAACTATTGATTTTTTAGTTTAAATCTCTTTTACTACCGTTATATTGGAACTATGAACGTAATAGTTTACCTATAGTTTTATTATGATAAATTTGCTATCTAATACGTAGTTGTGGGATAAAATTAATTAATGCGAAATATATTTTTATGATACAACACTTTAAATTTTAGTTTTATCACAATTTAATTAAAGTATGTACTTTTTTAATTAATTTGGCACCATGCACGATGAATTCATGCAGCAACAACGCCGGCAAGTTCGCCGACCGATTCGCCTTGTCCGACGACGGCGTCGAGATGACCTTCGCCACAAACTACTTGGGTACGTACGTTGCATGCGATTAACAAAGCTTAAATAATTACGCTAAGTGTTTATCGAAGATGCTAATTAATTACGGTGCTAACTAATTATCGCGTTAATGGATTGGATATAATTAATTCAGGGCACTTCCTGCTGACGAAGCTGCTGATGGAGAAGATGGCGGAGACGGCGGCGGCGACCGGCGTCGAGGGCCGCATCGTCAACGTATCCTCCACAATCCACAGCTGGTTCGCCGGCGACGACGCCGTCGGCTACATCGACGCCGTCACGCGCAGGAAGATGTGCGTAGAGTTAGTTACAAATCCCTGTCACATCACACTTAAATTTAATTTCTCAAAAGAAAATAAGACAAAAAAAAGACGATGGAGATATTAATCCGTGCTTTAAGATTCACGTTTTGGATATCATGCACCTGTGCAGACCGTACGATCCGACGAGAGCCTACGCGCTCTCCAAGCTGGCCAACGTTCTCCACACGAGGGCACTCGCGGATCGGCTCAAGGTAATTATTATTCACTCTGATCTCATAAATCAAATTAAGACTAGTATATACACACATACATACTCCCTGCGTCACATAAAAAATCAAGCTAGTACTGGATGTGTTTCCAGTACTATAAATCTGAACATACCTCTGTCCAGATTCGTTGTACTAGAATATGTCAGATCCAGTCCTAGATTTATTATTTTATTTTTTGGACGGAAAGAGTATTTCGGTTATATTTGTTATTTTTTCACGAGTTGTAGAAGTTGAATTTTAGGTTGGATATTTATGAAGTGGCGATACAACGTATATTTATCACATCTTATCAGTTTTCAAAAAAAATAATAATTATTTAGGTCGCATACAGAAAATAAAGAAGGGATATCCATTCCATAAAAAAAAAGTTTCCCTGATCTCATGACTTAATCACACGACAAAGCATAGCCAGTGCTAAATTAAGCAATTAACCTTAATTAATTAGCTCTAGATTAAGCTAATTGCCATCAATGGCTTGAGCAGGAGATGAAAGCCAACGTGACGGCAAACTGCGTCCACCCTGGTATCGTCAGGACCCGGCTCATCCGAGAACGCGACGGCCTTGTCACCAGTAATTCTTCTCATCCCTCTTCAATTTTTTCAACAAATTTACCAGCATCCAAGTAAGAAATTTACCCAAGAAATGATTTTAACTGCAGATACAGTCTTCTTCCTGGCGTCCAAGCTGCTCAAGACGATCCCTCAGGTCAGTTTCATCAGTGGATTTCGTAGGCAAGAATTTACTGAAAATGGTGCTTTGAATTGAATCTTCGATGATCCATGTTTCTTCCAGGGTTAAACCATTCGGTTTAGCCAATTTGATTGGACATCATCGAAATACTGAAATTTCCAAAATTTTAAACAAATTTTAGTTGAATTTAAATAAATATTACCAAAATTTATGAAAATATTAAGAAAATAAAAAATTTTGGTCGAAATAATATCGTATCGGACAGTCCGAAATTCCAACCCTGGTTTCTTCTTAAATTCTGATCCTGTCTTGCTCATGCTATATATAATCAACAGGCGGCGGCGACGACGTGCTACGTGGCGGTGCACCCGGCGGTGGCCGGAGTGTCCGGCAAGTACTTCGCCGACTGCAACGAGGCGTCGCCGTCGAGGCTGGGATCCAACGCCGACGAGGCCGCCAAGCTGTGGAGATTCTCCGACGAGGTCGCTGCGGAGGAGAAGGAGGAGAGTGTTCATGCCGGCAGCTTCAGGCTCCAGGTTCAGAGCTCCAATGCAGACCGTGGCTTGGCTTTCGCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022230