BGIOSGA022231

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Revision as of 13:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022231| Description = BGIOSGA022231| Definition = Oryza sativa Indica Group BGIOSGA022231, complete gene.| tag = | tid = BGIOSGA022231-TA|...")
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Gene Name

BGIOSGA022231

Description

BGIOSGA022231

Definition

Oryza sativa Indica Group BGIOSGA022231, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA022231-TA

Ensembl Protein ID

BGIOSGA022231-PA

Length

4255

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1721238..1725492

Sequence Coding Region

1721238..1721290,1721510..1721630,1722107..1722418,1722573..1722677,1722776..1723233
,1723653..1723954,1724067..1724248,1724660..1724850,1725015..1725148
,1725254..1725492

Genome Context

<gbrowseImage1> name=IndicaChromosome06:1721238..1725492 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:1721238..1725492 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTAACTTTGGGAAGAAATTGATGGCTGATCAAATTCCGGAATGGAAAGGGTACTACATAAACTACAAGTTGATGAAGAAGAAAGTAAAACAGTACGGGCAGCAGGTTCAACAGGGTGAGAAAGATCGTCGCCGGGTTCTTAAGGATTTCTCGAAGATGCTTGATGATCAGATTGAGAAGATTGTCCTATTTCTGTTGGAGCAACAAGGAGCGTTGGCAAGCAGGATAGAGAAATTAGGAAAGCAAAGGGCAATATTAGCAGAACAGCCAGATATATCTGCCATTGCTGAGTTGCGAGAAGCTTACAGGGAAGTTGGCCTGGATCTTATCAAACTTCTCAAATTTGTTGATCTCAATGCGACTGGCATTCGGAAAATTTTGAAGAAGTTTGACAAGCGTTTCGGCTACAGATTTACTGATTACTATGTGACAAGTAGATCGAATCACCCATATTCTCAGCTACAGCAGGTCTTCAAGCATGTGGGTGTTGGAGCTGTTGTTGGAGCGTTGTCACGTAACCTTGCTGACCTTCAAGAGCGGCAGGGAAGTTACTTGTCAATTTACGATCAGCCATCTACTGCTCTTAAGGACCCAATCATTGATATGATAAATTCATCAGTGGATAAGCTAACACGCTCAACAAATTTTCTTAGATTTTTGGGGCAACATGCCCTAATTGTTGGTGAGGAGTCTCCTAGTACTGCAGAGGAAGAAGAAATAGAAGATCAAAAATACCATTTCATGTCCCTTATGCTGAACTTGGTGAACACATTCCTTTACATGGTCAACACATATATCATTGTCCCGACTGCAGATGACTACTCAGTGAGCCTTGGGGCTGCTTCCACTGTTTGTGGTGTTGTTATTGGTTCGATGGCTGTTGCGCAAATATTTTCCTCAGTTTACTTCAGCGCATGGTCCAACAAGTCATATTTCAGACCACTTATTTTCAGCAGTATTGTTCTTTTCTTGGGTAATGTCTGCTACGCAATGGCATATGATATGAAGTCCCTAACAGTCCTCATTATTGGCCGTCTACTCTGTGGAATGGGTTCTGCAAGAGCTGTCAATCGCCGATACATCAGTGATTGTGTCCCTGCAAGGATACGCATGCAGGCTTCAGCAGGATTTGTCAGTGCAAGCGCACTTGGCATGGCTTGTGGGCCTGCATTAGCTGGCTTACTTCAGTGGAAATTTAAGATTTACATGGTTACTTTCAACCAATCAACTCTACCTGGTTGGGTGATGGCTGTTGCATGGCTTCTGTACTTAGTTTGGCTATGGATCTCGTTCAAGGAACCAAATCGTGCCACTGAGGTGAATGGTACCCAGCAAAATCCTGCTTCTGTACAAAGGGCAGATATCGAGCAACTAGAAAATGGACTTGCACAACCATTACTAAGAGATTCAAGCAAAAAAGATGAAGATGATGACGAAGAAGTCGATGATAGCGAAGAAGGCACACATGATTCTCGCAAACCCGCGACTTCGATTGGTTCAGCATACAGATTGCTTACACCTTCAGTAAAGGTCCAATTGCTGATATATTTCATGCTCAAATACGCGATGGAGATTTTACTTTCTGAGTCAAGTGTTATTACCAATCACTATTTCAATTGGAATACAAGTGCAGTGGCGATATTTCTAGCAATTCTTGGCCTAACAGTTCTTCCTGTTAATGCTGTTGTTGGGACATATATCAGCAACATGTTCGAGGACAGGCAACTCCTGATGGTGTCTCAAATCACACTGCTGGTCGGCATTATTTTCAGCTTCAAAATCACGAGCACATACTCGGTTGTCCAGTATGTCGTCTCAGCACTGGTCACATTTGTGTCTGCTGAAGTTCTTGAAGGAGTGAACCTCTCCCTCCTATCAAGCGTGATGTCGTCCCGTCTCTCCCGTGGCACCTACAATGGCGGGCTCCTCTCGACGGAGGCTGGGACCTTGGCCCGGGTGGTCGCCGACTGCACAATCACTGCAGCAGGGTACCTGGGAATCGGAAAGCTCCTCAATGTGACCTTGCTGCCGTCTCTGGTGATCTGCGCTGCTTCGATCGCGTCAACCTTCCTGACGTACAACTCCCTCTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MVNFGKKLMADQIPEWKGYYINYKLMKKKVKQYGQQVQQGEKDRRRVLKDFSKMLDDQIEKIVLFLLEQQGALASRIEKLGKQRAILAEQPDISAIAELREAYREVGLDLIKLLKFVDLNATGIRKILKKFDKRFGYRFTDYYVTSRSNHPYSQLQQVFKHVGVGAVVGALSRNLADLQERQGSYLSIYDQPSTALKDPIIDMINSSVDKLTRSTNFLRFLGQHALIVGEESPSTAEEEEIEDQKYHFMSLMLNLVNTFLYMVNTYIIVPTADDYSVSLGAASTVCGVVIGSMAVAQIFSSVYFSAWSNKSYFRPLIFSSIVLFLGNVCYAMAYDMKSLTVLIIGRLLCGMGSARAVNRRYISDCVPARIRMQASAGFVSASALGMACGPALAGLLQWKFKIYMVTFNQSTLPGWVMAVAWLLYLVWLWISFKEPNRATEVNGTQQNPASVQRADIEQLENGLAQPLLRDSSKKDEDDDEEVDDSEEGTHDSRKPATSIGSAYRLLTPSVKVQLLIYFMLKYAMEILLSESSVITNHYFNWNTSAVAIFLAILGLTVLPVNAVVGTYISNMFEDRQLLMVSQITLLVGIIFSFKITSTYSVVQYVVSALVTFVSAEVLEGVNLSLLSSVMSSRLSRGTYNGGLLSTEAGTLARVVADCTITAAGYLGIGKLLNVTLLPSLVICAASIASTFLTYNSLF</aaseq>

Gene Sequence

<dnaseqindica>1..53#273..393#870..1181#1336..1440#1539..1996#2416..2717#2830..3011#3423..3613#3778..3911#4017..4255#ATGGTTAACTTTGGGAAGAAATTGATGGCTGATCAAATTCCGGAATGGAAAGGGTATGATTCAGGGCTTTTATTACTTTAATTTTTATGGACCATTCTACGCTTACCAGTTCTGTAAATATCATCAGTCTTCCACCCCTCACCAGATAATTTTTTCTATGGAAACTTATTATTTTTTTCTTAACAAACCTGATAGTCTAATGATACATTGAAATAGTTGATACTTAGTTACCGAAATTTAGCTTTGCCTCTTTTTTATACCGATGTTTCCAGGTACTACATAAACTACAAGTTGATGAAGAAGAAAGTAAAACAGTACGGGCAGCAGGTTCAACAGGGTGAGAAAGATCGTCGCCGGGTTCTTAAGGATTTCTCGAAGATGCTTGATGATCAGGTAATGCCAAGAGATAGATGCTATGAAAAGCCATTACTTCATTCTCCCTGATCTGCTTTAATTGCAGACTTTAGCTTCTCTGTGGATATTTAGCTTGCTGAGTGTAGCATCAACATGGTGAGCATGTGTAATCTGTATGTCAGTGTTTACCCACATATGCTCATATATCAAATTATCCATGCATGGCCTTTCTAAGCAAAGGAATTTCAATAGTTTTATTTTAAATAAACTGTAGCGGAGTTTTGTCACCAATTTTCTTGTAGAAACTGAGTAATACTATCAAAATGTTACAAGCCAACAGTTCTAGTTGACGACTTACTGTTCTTTATTTTTTTTCTTTCTGGTGCTCACATGTGAGCCCTGTTTTCACCTGGTTCCATCCCTTGTGCGAGATTTTGATGCAACAAATTTATCTAATTGACCATACTAAAATTTGTGTTTTACATTACTGATGTTCTGTTTTCCTGTGGCATCAGATTGAGAAGATTGTCCTATTTCTGTTGGAGCAACAAGGAGCGTTGGCAAGCAGGATAGAGAAATTAGGAAAGCAAAGGGCAATATTAGCAGAACAGCCAGATATATCTGCCATTGCTGAGTTGCGAGAAGCTTACAGGGAAGTTGGCCTGGATCTTATCAAACTTCTCAAATTTGTTGATCTCAATGCGACTGGCATTCGGAAAATTTTGAAGAAGTTTGACAAGCGTTTCGGCTACAGATTTACTGATTACTATGTGACAAGTAGATCGAATCACCCATATTCTCAGCTACAGCAGGTCTTCAAGCATGTGGTAATGTACTGACTCCAGATTAAAGTATCATCAAATTTTTATACTGCTTTTCATTTGCATTGTATTGTACTATTTGCATCTATGGATCTGTGATCTTGCCTTTTGAATTCCATGAAACACAAACCAGTATAACTTACACGTTTTATGCAACCAGGGTGTTGGAGCTGTTGTTGGAGCGTTGTCACGTAACCTTGCTGACCTTCAAGAGCGGCAGGGAAGTTACTTGTCAATTTACGATCAGCCATCTACTGCTCTTAAGGTTCGTTCATCTTTTTTGCTGCTATCCTGTACGAAAAATGATAGAATAGCTTGTTATAGGGACTTCATTTTTACTGAGTTGTTCTTGATTCGTCGCAGGACCCAATCATTGATATGATAAATTCATCAGTGGATAAGCTAACACGCTCAACAAATTTTCTTAGATTTTTGGGGCAACATGCCCTAATTGTTGGTGAGGAGTCTCCTAGTACTGCAGAGGAAGAAGAAATAGAAGATCAAAAATACCATTTCATGTCCCTTATGCTGAACTTGGTGAACACATTCCTTTACATGGTCAACACATATATCATTGTCCCGACTGCAGATGACTACTCAGTGAGCCTTGGGGCTGCTTCCACTGTTTGTGGTGTTGTTATTGGTTCGATGGCTGTTGCGCAAATATTTTCCTCAGTTTACTTCAGCGCATGGTCCAACAAGTCATATTTCAGACCACTTATTTTCAGCAGTATTGTTCTTTTCTTGGGTAATGTCTGCTACGCAATGGCATATGATATGAAGTCCCTAACAGTCCTCATTATTGGCCGTCTACTCTGTGGGTAAGCGTCCTAAATACTAGTAAGCATCTTCTGTTTTAGCTTTTTTGTATGTTTTTTTTGGGGTGTGTGTGTGTCTGCACGTGTGTTTATTGCTTCAAAATTAGTCTTATGTTTGCATTTTTCAGTTATCATCCCTATATTCTAGTGTGGGATAGAACGTGTTTCTGTTGAATATATATAACACACCCCATTTGTTATTTTCCTGTGACATCGTTGGTTGCAACCATAGTAGGAAAGCAAGTTTTTATTGATTAGAAAATTCACATACAACTACAAAGGTCATATTGTTTCTATCTGAGCACAATTTCCTGTCAATAAGTTTTTGTGGCCACAAGAAAATTTTAGTGATATTGGACATGCTAGTTAAATATCTTTTCAGCATTGTCTCATGTTTAGTTAATGTAATTGTTGTCATGCAGAATGGGTTCTGCAAGAGCTGTCAATCGCCGATACATCAGTGATTGTGTCCCTGCAAGGATACGCATGCAGGCTTCAGCAGGATTTGTCAGTGCAAGCGCACTTGGCATGGCTTGTGGGCCTGCATTAGCTGGCTTACTTCAGTGGAAATTTAAGATTTACATGGTTACTTTCAACCAATCAACTCTACCTGGTTGGGTGATGGCTGTTGCATGGCTTCTGTACTTAGTTTGGCTATGGATCTCGTTCAAGGAACCAAATCGTGCCACTGAGGTGAATGGTACCCAGCAAAATCCTGCTTCTGGTATGTACTGCCTCTAATGCTTTTTATTACTTCATAACTGGTTGGATATTGCACTATAAAGAATTATCTAATCCATCCTCATGATTTTATTTTATGTTCATTATGATGGCAGTACAAAGGGCAGATATCGAGCAACTAGAAAATGGACTTGCACAACCATTACTAAGAGATTCAAGCAAAAAAGATGAAGATGATGACGAAGAAGTCGATGATAGCGAAGAAGGCACACATGATTCTCGCAAACCCGCGACTTCGATTGGTTCAGCATACAGATTGCTTACACCTTCAGTAAAGGTATAATATTATTTCAGCTAAATTGATCACTGCTTGCATTATTTGCCTGACTTTCTTTTTCTTTTACCCACATAAAGTTGTTTCTTTACTAATTTATTCAAGTCAATAGAGGAAATCTAGCATTAACTTGATATCATGCATCTTTAAGTAGCACAGTTAGCCTCATGGTCCCCAATATGCAATTTGGGTTTTGATTTTTAGTTGACTCGTTCATTCTTTTATATAAAGACGATCTGTTGTTACAACTGAATTTTTCACTGAAAAAATAAATCTCGGGATAGAATAAATCATTAAAGAGCCTTAGGTTCCAACCCCTACATTGCATTGCATTGATGGTAGGCCAATTGTACTGCTGAAAACGAAGTCTGTGACCACAATTTCTTTATTACTTACTCTGCTTCTCCTGTGTAGGTCCAATTGCTGATATATTTCATGCTCAAATACGCGATGGAGATTTTACTTTCTGAGTCAAGTGTTATTACCAATCACTATTTCAATTGGAATACAAGTGCAGTGGCGATATTTCTAGCAATTCTTGGCCTAACAGTTCTTCCTGTTAATGCTGTTGTTGGGACATATATCAGCAACATGTTCGAGGACAGGTTTGTGCCTCCATGCTTTATCGCTGGCATCACATGATTCACTTTCCTTTTGTTTTGCAGCAAGTCCATAACCAAGGGATAACCTTAGAATCTTGATCTGCATCTGAAAACAATATTTCAGACTCTGTTGACCTCTTTACCAAATTGCGTGATGTTTTTGACAGGCAACTCCTGATGGTGTCTCAAATCACACTGCTGGTCGGCATTATTTTCAGCTTCAAAATCACGAGCACATACTCGGTTGTCCAGTATGTCGTCTCAGCACTGGTCACATTTGTGTCTGCTGAAGTTCTTGAAGGTGAGACATCTGAGAAGCATTTTTTTTTCTTGGAATGTTCATCTACGGCTCATTTCTTCAGCCAGCACTGAATAAACCGTCTAAATTTTGTATCTGCAAATGCAGGAGTGAACCTCTCCCTCCTATCAAGCGTGATGTCGTCCCGTCTCTCCCGTGGCACCTACAATGGCGGGCTCCTCTCGACGGAGGCTGGGACCTTGGCCCGGGTGGTCGCCGACTGCACAATCACTGCAGCAGGGTACCTGGGAATCGGAAAGCTCCTCAATGTGACCTTGCTGCCGTCTCTGGTGATCTGCGCTGCTTCGATCGCGTCAACCTTCCTGACGTACAACTCCCTCTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022231