BGIOSGA022232

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Revision as of 13:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022232| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022232, complete gene.| tag = P0538C0...")
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Gene Name

BGIOSGA022232

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022232, complete gene.

LocusTag

P0538C01.22

Ensembl Transcript ID

BGIOSGA022232-TA

Ensembl Protein ID

BGIOSGA022232-PA

Length

8353

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1730343..1738695

Sequence Coding Region

1730343..1730640,1730744..1730969,1737254..1737395,1738165..1738695

Genome Context

<gbrowseImage1> name=IndicaChromosome06:1730343..1738695 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:1730343..1738695 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCAGCAAGCACACGCTGCTGCCGTCGTCGTCGGCGTACTGCTCTACTGCTGCCTCTGCTTGTTCGTCGGCGTCGTCGCCGGCGAGCATGGCGGCGGCGGCGGCGATATTAAGAGGCAGTACAAGGCCATGTTCAGCTTCGGTGACTCGCTGACGGACACGGGCAACATCTGCGTGAACATGTCGGCGGTGAATCGTACCGAGCTCACCATGGCGCAGCCTCCCTACGGCATCACCTTCTTCGGCCACCCCACCTGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCCTCGCGGAGGGGTTGGGGCTGCCGCTGCTGCCGCCGTCGAAGGTGATCGGCGGCGACTTCCGCCGGGGAGCCAACATGGCCATCGTCGGCGGCACGGCGCTGGACTTCGACTTCTTCGAGTCCATCGGCGTCGGCTTCCCGTTCTGGAACTACGGCTCCATGAACGTCCAGCTCCGGTGGTTCCGCGACTTGCTGCCCTCCATCTGCGCCACTGCTGCACCACAGAGTATAGCCTACCTGGCCGAGTCCCTCTTCTTGTTCGGCTCACTAGGCGGAAACGACTACAACGCTATGGTCTTGTTCGGCTTCACCATTGATCAAGCCAGGAACTACACGCCCAAAATTGTCGACCAAATTGCAAGTGGCGTCGAGAAGCTGATAGCGATGGGTGCAGTGGACATCATCGTCCCGGGAGTCATGCCGTTCGGATGCTTCGCGCTCTACCTGACGGAGCTCAAGAGCAGCAACAAGTCCGACTACGACGACTACGGCTGCCTGAAGCCGCTCAACGAGCTGGCCATCCACCACAACTCGCTGCTGCAGACCAGCCTCGCCGCCGTCCAGGCCAGGCACCGCAGGTCGCCGTCGTCATCGCCGTCGTCGCCGTCGCCGGCGGCGGCGGTGAGGATCATGTACGCCGACTACTACGCCGTCGTGGCGGAGATGATGCAGGCCCCGGCGCGGCTGGGGTTCAGGAGCGGCATCGCGGCGTGCTGCGGCGCGGGGGGCGGCGAGTACAACTGGGAGTACGTGGCGCGGTGCGGCATGAGGGGCGCCGCCGCGTGCGCCAACCCGTCGAGCGCCGTGTGCTGGGACGGCGCGCACACGACGGAGGCGGCGAACCGGGTCATCGCCGGCGGCTGGCTCAGGGGACCCTACTGCCACCCGCCCATTCTGCTCTAG</cdnaseq>

Protein Sequence

<aaseq>MAQQAHAAAVVVGVLLYCCLCLFVGVVAGEHGGGGGDIKRQYKAMFSFGDSLTDTGNICVNMSAVNRTELTMAQPPYGITFFGHPTCRCSDGRLVVDFLAEGLGLPLLPPSKVIGGDFRRGANMAIVGGTALDFDFFESIGVGFPFWNYGSMNVQLRWFRDLLPSICATAAPQSIAYLAESLFLFGSLGGNDYNAMVLFGFTIDQARNYTPKIVDQIASGVEKLIAMGAVDIIVPGVMPFGCFALYLTELKSSNKSDYDDYGCLKPLNELAIHHNSLLQTSLAAVQARHRRSPSSSPSSPSPAAAVRIMYADYYAVVAEMMQAPARLGFRSGIAACCGAGGGEYNWEYVARCGMRGAAACANPSSAVCWDGAHTTEAANRVIAGGWLRGPYCHPPILL</aaseq>

Gene Sequence

<dnaseqindica>1..298#402..627#6912..7053#7823..8353#ATGGCGCAGCAAGCACACGCTGCTGCCGTCGTCGTCGGCGTACTGCTCTACTGCTGCCTCTGCTTGTTCGTCGGCGTCGTCGCCGGCGAGCATGGCGGCGGCGGCGGCGATATTAAGAGGCAGTACAAGGCCATGTTCAGCTTCGGTGACTCGCTGACGGACACGGGCAACATCTGCGTGAACATGTCGGCGGTGAATCGTACCGAGCTCACCATGGCGCAGCCTCCCTACGGCATCACCTTCTTCGGCCACCCCACCTGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCCTCGGTTCAATTCGATCGCCATTGCTGATCGATCGAAGCTGCTTATTATTTCATCGATATATATAATATATGATCATGAAATGATATCGATGTATAATTTGATGCAGCGGAGGGGTTGGGGCTGCCGCTGCTGCCGCCGTCGAAGGTGATCGGCGGCGACTTCCGCCGGGGAGCCAACATGGCCATCGTCGGCGGCACGGCGCTGGACTTCGACTTCTTCGAGTCCATCGGCGTCGGCTTCCCGTTCTGGAACTACGGCTCCATGAACGTCCAGCTCCGGTGGTTCCGCGACTTGCTGCCCTCCATCTGCGCCACTGCTGCACCACAGAGTATGTACGTTGTTTCATGTGTTTAGATACTTGTAGCTGTTTTTTTTATAAGGAAAGCACAGTGGAGGAGGCTTTCACGGTATATATATTAAATAAAAAAGGGCTATATAAAAAATAAAAGCAAAACAAAATAAAAGCAAAACAAAGCAAATTATATACTTGTACCTGTTGATCAACAGGAGTACTATTTTTAAATTTTAACCGATTTTCAAATGTTTGGACTACGTGAACAGAATTTTAATGTCTTTCTAAATGATGCGAAATATTTTGATAACATAAGCATCTTTTTTAAGAGTTGTATAATTTTTTTCTGTTGGAGTTAATTTATTTCTAGAACATACCAGCCTACTCTCTAACCCTCTCTACTACTCGTGAAACTAAAGTCAAGGTTGAAGTCCTTGCTCTATAAATTTTCTAGAACAGTGTAGTGTGTAGACATGCATGATGTGATTTGACAGTAGTACTAGTACCAGTGAAGTTTGACAATGTAGTAGTACTACAAGTCTCTAGCTAGGTCCTGAAGCTTCCTACATATCGGTTTATCAAGCCTATAAATAGAAAGCCAGTGCATGTGTATAGACTGATGATGGTGTGCTGCCCAACGTACAAGCAAGTGTACTGTTCAGCCCTCAAGCAAGCAAGTAAAGAAACCAGTTAAAACTAGCACAAGCTTCTCTGCTCCTCTTCTCTGATCCCCTGCTTAGGAAATATTTAGCACCAACATGGACTACGTGAACAGAATTTTAATGTCTTTCTAAATGATGCGAAATATTTTGATAACATAAGCATCTTTTTTAAGAGTTGTATAATTTTTTTCCCACAAAAAGACCAAAGATCATCAAATTTAAACAAGAATAATGTCGTGGCAAGTACTTCCTTTGCCCCCCACAAACTCCATTTTATAAATAAAAGTTAACAGGTTAATGGTGAGGGTAGGGACGTAGGGTTGTCAATTTTGTTTTGGACTAAAATTTCGGTGCACTGAAAATTTTTAGAATTTTCATACTTTTTGTCCAAAATTATTTGAAAATGCAATAAAAACTGATTAAATTTTAATAAAATTTGATCAAATTTAAAAAATACAAAGAAAAACCAAAAAATTTTGGCCGACATATTTGCTTGCCGACGGAGGACGAAGTTACCAAAATTGACAACCTAGGTCAGGATAAAAGATTAAATTGTTTATTATTAAGAATATGGACTGTATAAAATTTCTCGATTTGCGGGGTTAAGGTTAGTTATAAGAGAAATTTTTTCCTTTTTCAACAAAGATGAAGGGCCAACATGTTTTTTTTACCAGAGGGAGTATTTGGCTATCTGTTCGACTGTTCCTAGTAGCTAGCTAGCTGTCGTTACAAACACCATTATTTCTTTCAGCTAATTACTCCCTCCGTTTCAAAATATTTGACACCGTTGACTTTTTAGCACATGTTTGACCGTTCGTCTTATTAAAAAAAATTGTGAAATATGTAAAACTATATGTGTACATGAAAGTATATTTAACAATGAATCAAATGATGTGTGTCGACGTTTGATATCTCGACTACGGTATTTGCATGGCATGGGGATCGTTGGTACTAGGATATACGCGAGACTGAGGTAAAAGAGATGGAGACAGGGATTTTTATACAGGTTCGGGCCCCTGAATTGTCAGGTAATAACCCTACATCCTGTTGGCCGAAGCCGGAGTTGCTTTTTATTCACCATAATCACACCAGTACAATATGTGAGGTAACCTATCTAACTGTTGTCGACATGGTGGTCTGAAGGTCTGACTCGTAGTCGACAACAGGGTAGCCTTCCTCCTCGAATCCGTGCCCGGCGAGATCAGAGATAGCGCATTCGTCTCTCCTGACAGTATCCGGAGACACCGTAAGGGACTAGCCGTGCCTATCTTTGATGTCGATATCTGGCGTCTTGTCTTGGCGTATGTTGGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTCTGGGGGTCAACTCTCCAAATCAGTCTCTCTTCGGTGAGGTTGTGATTCTGCAACCGTTAAAAAAAACCTAGCTCGATTCCATGACCGGAAGGCAAAGTTATCAAGGTTTTAATTTGCACAGAATTCTCCATCTGCATTCCACTGTGTCGCGCCCGCCAGCCTACCTTAACGGCGCGGTTAGTCGACGCGCTTGACACCGACATCGTCTAAGCTATCCACCCTAACGTCCTATGTGCCATCCCTATACTAACCACCTCGTTGAAAACTAGTTGTGGACCCTTAGATATTCGGCGTTTCGCCGAAACAACCGCTGCTTCGTGGCCTATAGTTAGTAATTTCTAGAAAAATCTCTGGGGGTCCAACTCTCGAAATCCAGTCTCTCTTCGGTGAGGCCCATAATTCTGCAGCCGTCAAAAAAAACCTAGCTCGATTCCATGACCGGAAGGCAAAGTTATCAAGGTTTTAATTTGCACAGAATTCTCCATCTGCATTCCACTGTGTCGCGCCCGCCAGCCTACCTTAACGGCGTGGTTAGTCGACGCGCTTGACACCGACATCGTCTAAGCTATCCACCCTAACGTCCTATGTGCCATCCCTATACTAACCACATCGTTGAAAACCAGTTGTGGAACCTAAGATATTCGACGTTTCGTCGAAACAAGTGCTGCTTCGGGGCCTATGGTATGTAATTTCTAGAAAAATCTCTGGGGGTCCAACTCTCCAAATCCAGTCTCTCTGGTGTGAGAGCCTTGATTCTACAGGCGGTCAAAAAAAGCTAGCTCGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGTCATGCCCTCTGTCGCCGTTTTGGCCGTGAGCGCCGAGCGCCAGCTCGCTCCCTGACCGCCCTAGGTCGGTTTCCAAACCGACATTGCCCTCCTATTAAACCAAGGCGCCCTTTCTTCCTTCCCCTCTCCCATTCACTCTCGCTCCACCGCGCCATTGCCGCCCCCTCTGTCTCGCTTCCGCTGACCGCCGTCGTCGCGTGTGCCGGAGGAGCCGGTGCGCGCTAGGACGCGGAAGGGGACTCCGGGCGCTCGTCTTCTTCCTCTTCCCTGACCCGAGGCCGGAGAGATCACTCCCGTGCCGTCGGCCTCTCGTCACAGCGCTCGTCTCGTCTCGGTAGAACACCTCTCCCATTCTTCCTCCTCGCTCTCTCTCCTCCCCTTAGATTTGGCGGTAGCGATCGTAGCACTCCTCGTAGCCTGTAGGCGCCGCCCCAAGTCTCGCCGCCGCCCGGCACGGTCTCGCCGCCGTTGCCGCTCGCCACCGCAAGCCACCGCTCGTCGCCAGCCCCTCTCGGCGTAACCCCGCCCAATCCGGTGCTAGGAATGCAATCCCGTAGCCGCGTAGATGCTCTCGCCGCCAGGAATCGGCCCCTCATGGTCTCGTCGCCTTTTCCCTCTTTTGCCGCCGCCGGTGTGCGCCGCCGCGATTCAACGTTGTCGAGCCATCTTCGGTGCATCCAAGCCGAAGGCATGATCCCTCTCGTTCTTGTCGTCACACCGGTGCATCTCCCCTTGGCCGAAGATGTCCCAACGAGCTCCGGTGAACACCGCCGTCGCCCGCCGTCCATTTCCGGCCGGTCTCCCTTCGTCCTCCTCCAGCCGGCCCATGTGGCAGCCACGAAGGCGCCACGTCGGCGCCAGCTCGGCCGCGGGCCAGGACGGTTTGAACCCGGTTAGCCGTTCCTTCGATCCGTTCTCTCGTGCGCGCGTGGTCCACTGAGAGTCAGCCGGCTGCGCGTGGGCCCGCCGCCTCCTAGTCCACCCGGTGCACCATCTGTGAACCGCGTCCGCAAACCCTAGCTCCCCCGTGCCGCGTAAACCCTCTCTCCCGTGCACCGAGTCACTGACTCGTGGGCTCGCCCCGGGACCCTGCACGATGGATCCGGGTCTCCCTCTCTCTCTCCCCGCCTCCCTCTGTTGGACCGCCTCCTGAGGCCGCGTCCGCCCAATTAATTGGTCGAGCCGCGCCAACTCCTCTCGGGCCGCGCTCAAGCCGCCCGCGAAGTCTACATCTCCTCCCTATCTCGTTTCTAATCCAAAAAGGAGGTTACTAAATCCTTTTCTTTTAGCCCAGTAAATCCTTTAGTCTTAGAAAATTCCAAATCTTCTCAACCGTACATCCGTTTGACTCCGTTCAACTTCCAAAATTCCTCAAATCTCGAGATCTATCTAATGGCACGCTTAGAGGTCAATAATAGGGCTTTATTTTTGCCGTTTGTTGAGTTGTCCCGTTTCGCGTGTAGTTTCGGAGCCCGAAGACCCGCAGTGCAAGGATTTCGAGGATCAAGCTCAAGATCTCGAGCAAGGCAAGTCACATTTGATCATCTTGCACCTATAATTTAAATCTAAGTATTTCTCTTCCGCAAATATTGCGTGAATAGGTTTAACACAAGTAATTCGGCCGCGGCTTGCGAGATAGCCTACCGGCCCCAATCCTAATTGCTGCAATTACCCTCCTTGAATTATTGAACAATTAAAACTCCTTTGTCAACTGTTGTGCTTCGATGCACGGGCCTTCGAGCAAGTGCATGGGAGCACCTCCCCTCAAACTTAAAATATTCCAAGATGGGTAAAACTTGGGGTTTTACAAAAGACTTGGAAAACCCGACACCTGGGTCGGTGCTTGCGAACTAAATGAGTTTCCAAAAATCACAGACCGGGGGACGTGCCGGGAGCACGGTTTCCCGCTCTTGCACTTAAGGACCGATTCCTTTGGAATTTCATCCGTACATATAACAAGTACGACCACATGGGTGGAATGGGACACCCATGGCTGAGTAATTAGCTAATCAGGGGAGCCTTGATGCCGGGAGACAAGTGGATTCGCCAGGATAGTGTCGGGGAGGACCCCTGGGCTTCCTGGCACAGTATTATCTGGGACCTAACCTGTTGTTGGTCTGGCATATAGTAAACCTGTGTCGGCTCTCGAAATGCCTTGTCATGAAAACCTCAAGGTCACCAGACGTGGCTGTTCTGCACGGGCTGGGTGATCCGGGTTAGTAATGTCGTGTGAGTAAAGTGTGCCCCCTCTGCAGAGGTTATTAAACTGTTCGAACAGCCGTGCCCACAGTCATGGACGGATGTAAGGTGATTCCTTAGCGTAGTTTTGTTTGACTACTGCTCTGTGAAATTGCTGTTGTGGACTTGGGTTCGATGTTTGGAACATCTGTGGCTGACGGGATCAGCTAGGCCCGGGTGGCCATTTGAAAGTTGTGGCCGGGTGGCAAATCTTGAATCTATCAAAGACTGATACATTACACATACTCCGACCGGACGAGATGCACTGTCTCATCCGTGTCGTTTGAGAAGCACTCACTTAGTTGTTTTAAAAAGGAGTTTAACTAAAAATCAATTGTAAAAACAACAGCCTTTCCTTTGAATCCTTCATTAAACACAAAATTCCCATGACTTTGCGGAGTACTCCTGTACTCACCCTTGCTCTATATAAATATCCCCCCCAGTTGCTGAAAAAGATGAGATGGATCCCGCTGACGAGGAGTTCTTCCAGGAGCAAGTCGGCTATGATGAGTTTTAGGGTTTCGATCTAGTTCCTAAGTCGTGCCTGTGATGTATGGTCCAAGTCTTGGCTTCCGCTTTCCTCTTTTGTAATGCAGTTGTGAGCTCGGGGTCTGTCTGTAGCCCAACATGACTGTAAACCTACTCTATAATAAAGAGACCTCTGTTGCTGTGATATTCTGTCTTCCTGTGATACCAGCACTGTTTCCTGGGACTGGTATCCGTTAACAGGTTAATTTGGAGCGTCACGGGTTGGTTCCGTTCGAGGCTAGTTCGGGGCGTGACAGTTGTCTTGGTTGTCCCCTCTCCTCCTAGGGGGTCTTGTATTTATACCCATAGGTGTCCCCTTGTCCAAGTAGAATTAGGGATACCAATATGGATACAATCCGAGTATTTCTTGTCGTTTCCATGTAGAACTCTGGTTGTCTTTCCTTATCCGGAACTCCTCCTATATCCGCAGGTTGTTTCCGTATAGAACATGGTATGTGGTGGGTCCTGCCGAGATCTAGTCGACTACTATTAGATATATGGTATCCATAACCCGTGATAATATGAAAATAATAAATAATTACTTAAATTTTTTGAATAATACGAATGGTCAAACACGTACTAAAAAGTTATCTGTATCAAATATTTTGAAACGGAGGGAGTAGTTGACAAAAGTACAATCTGAATTAATGTTATTATTTGATTTTGACCTCGATCGATCAAGTTGCAGAGCCTACCTGGCCGAGTCCCTCTTCTTGTTCGGCTCACTAGGCGGAAACGACTACAACGCTATGGTCTTGTTCGGCTTCACCATTGATCAAGCCAGGAACTACACGCCCAAAATTGTCGACCAAATTGCAAGTGGCGTCGAGGTAATTAACATCACATATACTCTTTCCGTTCCAGTATAAGTATAATTTAATATAGATGTGACATATCCTATTTAAGACTAAAAATCTTGACACGTATATACTAGCTTACACTTATATTGGAACGAAGAGAATATTAATTAGAGTAAATTGTATCAAGTGCACAGATTTATATGGTGGGATACTTTTTTTTTCGTCTTTCCTCCTTAATTGGTCTAAATAATCTTACAGATAGAGGGAGTAGCTAAGCTAGAACCGGTCATAATCAAATAATTCGTGTGGAGTTAACCTTGATTAATTGATCTCTGCAAAATATTTTTGAAATATATTTTCGTTTATATTTGAAAAAAAAAATCTGCCACCAACATTTTCATATTACATACTCCTTCCATTTCATATTATAATTCGGTTTGACTTTTTTCTTAGTCAATTATTTTATGTTTAACCAAATTTATATATAGCAACATCTACAACACCAAATTAGTTTTAATAAACATAATTGTTTGTGTTAAAAAATTATTATATTTTTATATAAACTTGATCAAATTAAAAAAAATTGACTATGAAAATAGTGAAAGCGATCTAATAAATACCAAACAGAGGGAGTACTATATATTACAAGATAGTCATTCTATAAACCGTGGTTATCTATCATCTCTAAAATGAAGTTTATATATCTGTAGGGACGAAGTGCATATATCTCACATTTTTCCATAGTAAAGTACTGCCATTTAGCTAGTAATAGTAAATCATATGGCAATCGCATATGCAGAAGCTGATAGCGATGGGTGCAGTGGACATCATCGTCCCGGGAGTCATGCCGTTCGGATGCTTCGCGCTCTACCTGACGGAGCTCAAGAGCAGCAACAAGTCCGACTACGACGACTACGGCTGCCTGAAGCCGCTCAACGAGCTGGCCATCCACCACAACTCGCTGCTGCAGACCAGCCTCGCCGCCGTCCAGGCCAGGCACCGCAGGTCGCCGTCGTCATCGCCGTCGTCGCCGTCGCCGGCGGCGGCGGTGAGGATCATGTACGCCGACTACTACGCCGTCGTGGCGGAGATGATGCAGGCCCCGGCGCGGCTGGGGTTCAGGAGCGGCATCGCGGCGTGCTGCGGCGCGGGGGGCGGCGAGTACAACTGGGAGTACGTGGCGCGGTGCGGCATGAGGGGCGCCGCCGCGTGCGCCAACCCGTCGAGCGCCGTGTGCTGGGACGGCGCGCACACGACGGAGGCGGCGAACCGGGTCATCGCCGGCGGCTGGCTCAGGGGACCCTACTGCCACCCGCCCATTCTGCTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022232