BGIOSGA022235

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Revision as of 13:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022235| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022235, complete gene.| tag = P0538C0...")
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Gene Name

BGIOSGA022235

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022235, complete gene.

LocusTag

P0538C01.27

Ensembl Transcript ID

BGIOSGA022235-TA

Ensembl Protein ID

BGIOSGA022235-PA

Length

6154

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1771464..1777617

Sequence Coding Region

1771464..1771702,1772169..1772240,1772465..1772536,1772637..1772708,1772990..1773061
,1773273..1773344,1773442..1773513,1773601..1773672,1773757..1773825
,1773943..1774014,1774140..1774211,1774295..1774366,1774451..1774522
,1774605..1774676,1774765..1774836,1774951..1775022,1775114..1775185
,1775298..1775369,1775466..1775537,1775627..1775698,1775785..1775856
,1775948..1776018,1776104..1776235,1776341..1776679,1776762..1777132
,1777264..1777617

Genome Context

<gbrowseImage1> name=IndicaChromosome06:1771464..1777617 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:1771464..1777617 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGAGGGCGCCGTGGCTGTGGTGGTGGGTGGTGGTGGTTGTTGGTGTGGCGGTGGCGGAGGCGGCCTCCGGAGGAGGAGGAGGGGGAGATGGGGAGGGGAAGGCGCTGATGGGCGTGAAGGCCGGTTTCGGGAACGCGGCCAACGCGCTCGTCGACTGGGACGGCGGCGCCGACCACTGCGCGTGGCGCGGCGTCACCTGCGACAACGCCTCCTTCGCCGTCCTCGCCCTGAACTTGTCAAATCTAAACCTAGGAGGTGAGATCTCGCCGGCCATCGGAGAGCTCAAGAATCTACAGTTCGTTGATCTCAAGGGGAACAAGCTCACTGGCCAAATCCCAGATGAGATTGGGGACTGCATCTCCTTAAAATATTTGGATTTGTCTGGCAACTTGCTGTATGGAGACATCCCCTTCTCCATCTCCAAGCTCAAGCAGCTTGAGGAGCTGATTTTGAAGAACAACCAGCTCACGGGACCCATCCCTTCCACATTGTCCCAAATTCCAAATCTCAAGACATTGGACCTGGCACAGAACCAGCTTACAGGCGATATCCCAAGGCTCATATACTGGAATGAAGTTCTGCAATACCTAGGTTTGAGGGGTAACTCACTGACTGGAACTTTGTCACCTGACATGTGCCAACTGACTGGCCTGTGGTACTTTGATGTAAGGGGAAACAATCTCACAGGGACCATTCCAGAGAGCATAGGGAACTGCACCAGCTTTGAGATTCTGGACATTTCGTATAACCAAATCTCTGGAGAAATACCTTACAACATAGGCTTTCTTCAAGTAGCCACACTGTCACTTCAAGGAAATAGACTGACTGGGAAAATTCCAGATGTGATTGGCCTGATGCAAGCTCTTGCTGTTCTAGACCTGAGTGAGAACGAGCTGGTAGGGCCCATTCCTTCTATACTGGGCAATCTATCCTATACTGGAAAACTATATTTACATGGGAACAAACTTACTGGAGTCATACCGCCGGAGCTTGGGAACATGAGTAAACTTAGCTACCTACAACTGAATGATAATGAATTGGTGGGCACAATTCCAGCAGAGCTTGGCAAACTTGAAGAGCTTTTTGAACTAAATCTTGCCAACAACAATCTTCAAGGTCCTATTCCTGCAAACATCAGTTCTTGCACTGCTCTAAACAAATTCAATGTTTATGGCAATAAGCTAAATGGTTCTATTCCTGCTGGTTTCCAGAAGTTGGAGAGTCTGACTTACTTGAACCTATCTTCAAACAATTTCAAAGGCAATATTCCTTCTGAGCTTGGTCACATCATCAACTTGGACACATTGGATCTTTCCTACAATGAATTCTCTGGACCAGTTCCTGCTACCATTGGTGATCTAGAGCACCTTCTTGAACTGAATTTGAGTAAGAACCATCTTGATGGGCCAGTTCCTGCTGAGTTTGGAAACTTGAGAAGCGTCCAAGTAATTGATATGTCCAACAACAACTTATCTGGTAGTCTGCCCGAGGAACTTGGACAACTTCAAAACCTTGATAGCCTGATTCTTAACAACAACAATTTGGTTGGGGAGATCCCTGCTCAATTGGCCAACTGCTTCAGCTTAAATAACCTGAATTTGTCATACAACAATTTATCTGGACATGTCCCGATGGCAAAGAACTTCTCGAAATTCCCAATGGAAAGCTTCTTGGGTAATCCATTACTGCATGTTTACTGCCAAGATTCCAGCTGTGGACACTCTCATGGACAAAGAGTTAATATTTCAAAGACAGCAATTGCTTGCATTATCTTAGGCTTTATCATATTGCTCTGCGTTCTGCTGTTGGCTATATATAAAACAAATCAACCACAGCCACTTGTCAAAGGATCCGATAAGCCAGTGCAAGGACCTCCAAAGCTAGTTGTTCTCCAGATGGACATGGCTATCCATACTTACGAGGACATCATGAGGCTGACAGAGAATTTGAGCGAGAAATACATCATTGGCTATGGCGCCTCAAGCACTGTCTACAAATGTGAACTCAAGAGCGGCAAGGCCATTGCTGTCAAGCGGCTTTACAGTCAGTATAACCATAGCCTCCGAGAGTTTGAAACAGAACTAGAGACAATTGGCAGCATACGGCACAGGAATCTTGTTAGCCTCCATGGCTTCTCGCTATCTCCACATGGAAACTTGCTCTTCTATGATTACATGGAAAATGGTTCCTTGTGGGATCTTCTCCACGGTCCATCAAAGAAAGTGAAGCTCAACTGGGACACAAGACTGAGGATCGCGGTCGGAGCTGCACAAGGGCTGGCCTATCTCCACCATGACTGCAACCCTCGCATAATCCACAGAGATGTCAAGTCCTCCAACATCCTGCTCGACGAGAACTTCGAAGCGCACCTCTCAGATTTCGGCATAGCCAAATGTGTCCCCTCTGCCAAGTCCCATGCCTCCACTTATGTGCTAGGAACCATCGGCTACATTGATCCGGAGTATGCCAGGACTTCCAGGCTCAATGAGAAATCTGATGTGTACAGCTTCGGCATCGTCCTTCTGGAATTGCTCACAGGGAAGAAGGCCGTCGACAACGAATCGAACTTGCATCAATTGATACTCTCCAAAGCTGATGACAACACAGTCATGGAGGCAGTGGACTCGGAGGTGTCAGTGACGTGCACGGACATGGGACTGGTCAGGAAGGCCTTCCAGCTCGCCCTTCTGTGCACCAAGAGGCACCCTTCAGACCGGCCGACCATGCACGAGGTTGCAAGGGTGCTGCTCTCCCTGCTGCCGGCCTCCGCCATGACAACGCCCAAGACGGTGGACTACTCCCGGTTGCTGGCGTCGACGACGACGGCGGCCGACATGCGAGGGCACGACGTGACCGACATCGGCGACAACAGCTCCTCCGACGAGCAGTGGTTCGTCAGGTTCGGCGAGGTCATATCCAAGCACACAATGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAARAPWLWWWVVVVVGVAVAEAASGGGGGGDGEGKALMGVKAGFGNAANALVDWDGGADHCAWRGVTCDNASFAVLALNLSNLNLGGEISPAIGELKNLQFVDLKGNKLTGQIPDEIGDCISLKYLDLSGNLLYGDIPFSISKLKQLEELILKNNQLTGPIPSTLSQIPNLKTLDLAQNQLTGDIPRLIYWNEVLQYLGLRGNSLTGTLSPDMCQLTGLWYFDVRGNNLTGTIPESIGNCTSFEILDISYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPDVIGLMQALAVLDLSENELVGPIPSILGNLSYTGKLYLHGNKLTGVIPPELGNMSKLSYLQLNDNELVGTIPAELGKLEELFELNLANNNLQGPIPANISSCTALNKFNVYGNKLNGSIPAGFQKLESLTYLNLSSNNFKGNIPSELGHIINLDTLDLSYNEFSGPVPATIGDLEHLLELNLSKNHLDGPVPAEFGNLRSVQVIDMSNNNLSGSLPEELGQLQNLDSLILNNNNLVGEIPAQLANCFSLNNLNLSYNNLSGHVPMAKNFSKFPMESFLGNPLLHVYCQDSSCGHSHGQRVNISKTAIACIILGFIILLCVLLLAIYKTNQPQPLVKGSDKPVQGPPKLVVLQMDMAIHTYEDIMRLTENLSEKYIIGYGASSTVYKCELKSGKAIAVKRLYSQYNHSLREFETELETIGSIRHRNLVSLHGFSLSPHGNLLFYDYMENGSLWDLLHGPSKKVKLNWDTRLRIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILLDENFEAHLSDFGIAKCVPSAKSHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNESNLHQLILSKADDNTVMEAVDSEVSVTCTDMGLVRKAFQLALLCTKRHPSDRPTMHEVARVLLSLLPASAMTTPKTVDYSRLLASTTTAADMRGHDVTDIGDNSSSDEQWFVRFGEVISKHTM</aaseq>

Gene Sequence

<dnaseqindica>1..239#706..777#1002..1073#1174..1245#1527..1598#1810..1881#1979..2050#2138..2209#2294..2362#2480..2551#2677..2748#2832..2903#2988..3059#3142..3213#3302..3373#3488..3559#3651..3722#3835..3906#4003..4074#4164..4235#4322..4393#4485..4555#4641..4772#4878..5216#5299..5669#5801..6154#ATGGCGGCGGCGAGGGCGCCGTGGCTGTGGTGGTGGGTGGTGGTGGTTGTTGGTGTGGCGGTGGCGGAGGCGGCCTCCGGAGGAGGAGGAGGGGGAGATGGGGAGGGGAAGGCGCTGATGGGCGTGAAGGCCGGTTTCGGGAACGCGGCCAACGCGCTCGTCGACTGGGACGGCGGCGCCGACCACTGCGCGTGGCGCGGCGTCACCTGCGACAACGCCTCCTTCGCCGTCCTCGCCCTGTACGTCCTCCTCCCTGCGAAGCTCGGTGTTCTTTCCTGGGCAGACATGGCGCGCGGCGGCGCGGGTGGTTGCGTTCTTGTTCTTGCAATCTTCTCTTGTGGTGGCTGTTGGTTTTTTCTTTTCTTTTCTTTTTCCAGCGTGCACTCTGTGCTTCATGTGATTTTTCTCTCTTGCCGTGCTCGCTCTGGCATTCTGATCAGGAGGAGCAAATAGTTCAACTGTTCTGTTCTATTCTTGCCTCCCTTTTTTTTCTGAATAAAAACCTTTTCTTGGTTGGTCTATTTGTGCCTAGATTGCTGTGAATGTTTCTTCTTGATAATCTTGTTGTTATCGTATATATCTAATGGAAAAGAAACGGGTTTTTCTTGTTATCTTGCGTAGGTCTTTGGATATTAGTGAGGCTATCTTGTTTGTTATGCTAAAAAGGATTTTTGTGATGAGAGTGTTTCCCTGTGTGAAAAACAGGAACTTGTCAAATCTAAACCTAGGAGGTGAGATCTCGCCGGCCATCGGAGAGCTCAAGAATCTACAGTTCGTGTGAGTACGGATATGAGTAGAGAGTACTATTTCCCCTTGCTTTGCATCTACCTGAGTTTTTGTGCATTTGACTAGCCTGTATTTTCTTTTTATAATCCTGCACACTTCACCTGATTTGACCCCTCATGCCATGATGTGACACAGTTCTTTACTATTTTACTTTAAGCCTGTGGATTTGCTCGCTGATTAGTTTATTTGTGCTCTAATGATTTGCCTCTCTGCAGTGATCTCAAGGGGAACAAGCTCACTGGCCAAATCCCAGATGAGATTGGGGACTGCATCTCCTTAAAATATTTGTACTTCACCTAATCTAAGTCTTCTTTTATTCTGTTACTTTTTGTAACAGGGTGTTCTAGCTAATTTTTTAATTGGGCTCTTTTGATTCTTGCCATGCAGGGATTTGTCTGGCAACTTGCTGTATGGAGACATCCCCTTCTCCATCTCCAAGCTCAAGCAGCTTGAGGAGCTGTAAGCTCTACTTTTTTTAAATCTTTTCCTACCTTTTCTTTAGCAAGAGCTATGGCCTATAGCTGTTGAGATATGGGCACTTCCTCTCCCTTCTTTGGAAAGTTCAGGCTAATACTGAGACATCAGAGACTAATTGATTTACATTAAGTTTTGGAACATCTTGTTCTAGAATCCAGATTATGATACTGAACATCTTGTTGGAGTAGTAGTAGTTTTTTTCATGGTTTTGCGATGCTTGGGTTGTAGTGGTAACATTTTTTCTCTCTCATTTATTGATGCAGGATTTTGAAGAACAACCAGCTCACGGGACCCATCCCTTCCACATTGTCCCAAATTCCAAATCTCAAGACATTGTGAGCCTCTTAGTACCTTACTCTATCCGTGACTATTTACTTCTTTGGGGTTCTTGGACAAACTGGGTGATCTGACTTCTACTTGTTTAACTGTTTTTGTGTTATAATGTGCGTGCCACGGGAAACATGGCTTGCTGTGTCATTTTTTGCATCTTAAGTACTACTAGTTCTTACTTACTGATAAAATCCTTCCTTAATTATCTTGGAATAGGGACCTGGCACAGAACCAGCTTACAGGCGATATCCCAAGGCTCATATACTGGAATGAAGTTCTGCAATACCTGTAAGAATCCTATAAAAGAAAATTGTCTAACTGTTTTAGCTGGTAGTATAAGAAGGTATTTTTCAGGCATTAACACTTTGCTTCTCTTAATCTTCAGAGGTTTGAGGGGTAACTCACTGACTGGAACTTTGTCACCTGACATGTGCCAACTGACTGGCCTGTGGTACTTGTAAGTCATCTCCTCTCCCTTTGGAGATGTTGCTGCATATTGTGCAACTTGGCCTTGTTGACAGTGGTTACTGTTCTTAATCTACAGTGATGTAAGGGGAAACAATCTCACAGGGACCATTCCAGAGAGCATAGGGAACTGCACCAGCTTTGAGATTCTGTATGTTCTTGCTAAGATTTCAGTAATATTTCAGTGTTCATGAGTTTCAGACACCATAATGCGAGTTTCTTATTTGTATTGCAGGGACATTTCGTATAACCAAATCTCTGGAGAAATACCTTACAACATAGGCTTTCTTCAAGTAGCCACACTGTAAGTGTTCCTGAGTTATTGCAAATCCTCTAACATGTAATCTGCTGTTTCACTCTTATGCATATAGATGCTTTACTTACAGCCTTTATGTTGAACCATTTCTATTCATGTTCATAGGTCACTTCAAGGAAATAGACTGACTGGGAAAATTCCAGATGTGATTGGCCTGATGCAAGCTCTTGCTGTTCTGTGAGTAGAGCACGACATTTCAATCCATAGGTTTTAGTAGTTTCTGTAATATTTTTTTGACTGAAATTCAGTAGTTTCTGTAATATTGGATAATGAATTCTTATATTCATTTTTTTTATTCTCAGAGACCTGAGTGAGAACGAGCTGGTAGGGCCCATTCCTTCTATACTGGGCAATCTATCCTATACTGGAAAACTGTTAGTATCATCAGTCAGACTTTCTTTTTCACTGAGATTGCTTTCTTCTCTTCTCTAACACCTACTGTCACCTTTTCCTTCAGATATTTACATGGGAACAAACTTACTGGAGTCATACCGCCGGAGCTTGGGAACATGAGTAAACTTAGCTACCTGTAAGTGATTATATGGTATGCAGATATTGTTGTGCTCCAGTTGGTGTGGAACACTATAAGATGTTCAGAAATTTTTCCATGCAGACAACTGAATGATAATGAATTGGTGGGCACAATTCCAGCAGAGCTTGGCAAACTTGAAGAGCTTTTTGAACTGTAAGAAATTTTATCATGTCTATGAGTTACGTAGTATGCTTTATTTTATTCTGTGCAATTGTTGACCAAATTTTGCATGCAGAAATCTTGCCAACAACAATCTTCAAGGTCCTATTCCTGCAAACATCAGTTCTTGCACTGCTCTAAACAAATTGTAAGTTAGCCGGTACTAAGTCAACTTATAAGTTAACAGGGCATTTTTTACTCCACATGATTAAACATGTTTTTTTTTTGCCTCTCAGCAATGTTTATGGCAATAAGCTAAATGGTTCTATTCCTGCTGGTTTCCAGAAGTTGGAGAGTCTGACTTACTTGTGAGTAATTGTATCTGTTGCATTATGCTTACAGTAATCATTTAATTCACTCGGCGAAATTATTGTATTTCACCTAATGTTTTTCTTGCTTAAAAATACATTTAAAAAATACAGGAACCTATCTTCAAACAATTTCAAAGGCAATATTCCTTCTGAGCTTGGTCACATCATCAACTTGGACACATTGTAAGTAGAAACTTTAGCTATAATTATTTACCTGGTGTTACAAGACCTGTGGGCGCTAAATGATGTTCCTTTATTATTATTTTTTGAACAGGGATCTTTCCTACAATGAATTCTCTGGACCAGTTCCTGCTACCATTGGTGATCTAGAGCACCTTCTTGAACTGTATGTTGCGGACCAACCTCCTAGAAACCATACTGTTTTTAATGAAAAAACCATAACTTATTTCATATGGCCATTATTACTTGATGCCTAAATGGTTATGCTTTGACTGCAGGAATTTGAGTAAGAACCATCTTGATGGGCCAGTTCCTGCTGAGTTTGGAAACTTGAGAAGCGTCCAAGTAATGTAAGTGTGTTCCCTTGAAACACATGTAACTAACTATTATCTGTTTGAAGCCATCCTATCATCATGATTCAGCTGAACCAAAATTTAAATTCTCAGTGATATGTCCAACAACAACTTATCTGGTAGTCTGCCCGAGGAACTTGGACAACTTCAAAACCTTGATAGCCTGTGAGTTGTATATCATCATAAATTCATATTATGCGTGTGAGATCGAAAATCACCTAAATATTTTACTGAGCTATGGTGTTATCATGCAGGATTCTTAACAACAACAATTTGGTTGGGGAGATCCCTGCTCAATTGGCCAACTGCTTCAGCTTAAATAACCTGTAAGTTTTGTGTGCAAGCTCTGCTCTGTAGCATTGTATACTGGTGATAACTTGGGCAGGATTATTTATCCTTAAGTGCATTTCAGGAATTTGTCATACAACAATTTATCTGGACATGTCCCGATGGCAAAGAACTTCTCGAAATTCCCAATGGAAAGGTATAAGATGGCACCATGCACAATCTCTGTTATCCTTCTATTAGCATCTTCTAATTTCTGATTGCAACCAGTACATAAATCATAAATGCAGCTTCTTGGGTAATCCATTACTGCATGTTTACTGCCAAGATTCCAGCTGTGGACACTCTCATGGACAAAGAGGTATCAGACAAGAAGCTAACCCCTTGTAGCTTTTCACTCCATTTGCTTTTCTGCTAAACACATGTTCACTTAATTTCTATTGCAGTTAATATTTCAAAGACAGCAATTGCTTGCATTATCTTAGGCTTTATCATATTGCTCTGCGTTCTGCTGTTGGCTATATATAAAACAAATCAACCACAGCCACTTGTCAAAGGATCCGATAAGCCAGTGCAAGGTATGTGTGCGCTATATCTCACCCCTCCAGTTGTCGTCGATGAAATTAACAGCAAGTATGCTGGCATAATGGAATTCATCTTAACCTTTTCTTAATCATATTCAGGACCTCCAAAGCTAGTTGTTCTCCAGATGGACATGGCTATCCATACTTACGAGGACATCATGAGGCTGACAGAGAATTTGAGCGAGAAATACATCATTGGCTATGGCGCCTCAAGCACTGTCTACAAATGTGAACTCAAGAGCGGCAAGGCCATTGCTGTCAAGCGGCTTTACAGTCAGTATAACCATAGCCTCCGAGAGTTTGAAACAGAACTAGAGACAATTGGCAGCATACGGCACAGGAATCTTGTTAGCCTCCATGGCTTCTCGCTATCTCCACATGGAAACTTGCTCTTCTATGATTACATGGAAAATGGTTCCTTGTGGGATCTTCTCCACGGTTAGGGCTTGAAACCTTTGGCTCATGGATAATTTGTTATCATTATGCATCTCCCTTATGATCTATATATGATCCTTTTCAGGTCCATCAAAGAAAGTGAAGCTCAACTGGGACACAAGACTGAGGATCGCGGTCGGAGCTGCACAAGGGCTGGCCTATCTCCACCATGACTGCAACCCTCGCATAATCCACAGAGATGTCAAGTCCTCCAACATCCTGCTCGACGAGAACTTCGAAGCGCACCTCTCAGATTTCGGCATAGCCAAATGTGTCCCCTCTGCCAAGTCCCATGCCTCCACTTATGTGCTAGGAACCATCGGCTACATTGATCCGGAGTATGCCAGGACTTCCAGGCTCAATGAGAAATCTGATGTGTACAGCTTCGGCATCGTCCTTCTGGAATTGCTCACAGGGAAGAAGGCCGTCGACAACGAATCGAACTTGCATCAATTGGTAAGCCACCCCACTTCCACAGTTCCACTCCATCCTCTCATCACATTGTGCAAAATTATCACCAATTCTAGAACTTTTCTAGCATGATCCAATGGATGATTTGTATGACAAGATCTTGTGTCAATGTTCAGATACTCTCCAAAGCTGATGACAACACAGTCATGGAGGCAGTGGACTCGGAGGTGTCAGTGACGTGCACGGACATGGGACTGGTCAGGAAGGCCTTCCAGCTCGCCCTTCTGTGCACCAAGAGGCACCCTTCAGACCGGCCGACCATGCACGAGGTTGCAAGGGTGCTGCTCTCCCTGCTGCCGGCCTCCGCCATGACAACGCCCAAGACGGTGGACTACTCCCGGTTGCTGGCGTCGACGACGACGGCGGCCGACATGCGAGGGCACGACGTGACCGACATCGGCGACAACAGCTCCTCCGACGAGCAGTGGTTCGTCAGGTTCGGCGAGGTCATATCCAAGCACACAATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022235

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA022235&oldid=44760"