BGIOSGA022238

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Revision as of 13:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022238| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022238, complete gene.| tag = P0493C1...")
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Gene Name

BGIOSGA022238

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022238, complete gene.

LocusTag

P0493C11.12-1

Ensembl Transcript ID

BGIOSGA022238-TA

Ensembl Protein ID

BGIOSGA022238-PA

Length

5147

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1813838..1818984

Sequence Coding Region

1813838..1813971,1814118..1814180,1814258..1814326,1814707..1814763,1815591..1815745
,1815875..1815930,1816074..1816167,1816961..1817024,1817251..1817333
,1817457..1817548,1818242..1818348,1818612..1818675,1818844..1818984

Genome Context

<gbrowseImage1> name=IndicaChromosome06:1813838..1818984 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:1813838..1818984 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCTGGCCGAAGCCGAGAACCCGCCGCGCCGCCGCCGACCTGCGCCGGACCCCGTCGCGGTGCTCCGAGGCCACCGCGCCGCCGTCAACGACGTCTGCTTCCACCCCTCCCTCCCGCTCATCTTCTCCGGCGCGGCTGACGGGGAACTCAGGGTTTGGGACACAGCGAGCCACCGCACTGTCTCCTCGGTTTGGGCTCATGGTGGATCGGCTGGTGTATATTCAGTGGCTGCTAGCACCAGACTTGGAAACAAAATCATTAGTCAAGGTAGGGATGGATCATGCAAATGCTGGGAAATCGAGGAAGCTGGGCTTTCACGGAGGGCCCTATATACAATCAGAACAAGTACATACCATTTCTGCAAAATGTCACTCGTTAAGTCAACATGTTCTACATGCTGCACACAATCTGGCTTGATCTCCGCAACTGGTGATATTGAGTCACAAAGCACAGTTACTGAAGAACGTGAACTAGGCACTTGCTGTAAAGGACCAAATATAATGGCAATCGCTGGTCAAGAATCATCGCAGGTTGAACTTTGGGATATTGATAACGCAATAAAGGTAATGTGCTTGCCTGAAACAGGCAGCGCTAATCTGGCTGATCACCCGACCAAGCAAAGAGGACTATGCATGGCTGTGCAAGCTTTCTTCCCTTGTGGTGCAGCTTATGTAAATATTTTGTCAAGTTACGAAGATGGAAGCACACTTTTGTGGGATGTACGAAATCCTGGTCTACCTGTATCCTCAGTGAAATATCACTCAGAATCAGCTTTATCCATTGCTATTGATGGGCTATGCAATGGGGGGATCTCAGGAGGTGCTGATGATAAAATTGTCATGTTTGGCCTTGATCATCAAAAGGGTGCATTTATTCTCAGGAAAGAAATAAAACTTGAGCGACCGGGTATAGCAGGCACTGCAATTCGGCCAGACAACAAGATTGCAGCGACCGCTGGTTGGGATCACAGGATTCGTGTGTATAGCTACAGTAAAGGAAACGCTCTAGCAGTGTTAAAGTATCACAGTGCTTCGTGTAATGCAGTGACATTCTCATCGGACTCCAAGCTGTTGGCTTCCTGCTCGGCGGATACTACGGTTGCATTATGGGAGCTCTATCCTCCCAAAACAGATAGCCAAGTTGGTCTCAAAACGAGAGATGAAATATCCCAATAA</cdnaseq>

Protein Sequence

<aaseq>MALAEAENPPRRRRPAPDPVAVLRGHRAAVNDVCFHPSLPLIFSGAADGELRVWDTASHRTVSSVWAHGGSAGVYSVAASTRLGNKIISQGRDGSCKCWEIEEAGLSRRALYTIRTSTYHFCKMSLVKSTCSTCCTQSGLISATGDIESQSTVTEERELGTCCKGPNIMAIAGQESSQVELWDIDNAIKVMCLPETGSANLADHPTKQRGLCMAVQAFFPCGAAYVNILSSYEDGSTLLWDVRNPGLPVSSVKYHSESALSIAIDGLCNGGISGGADDKIVMFGLDHQKGAFILRKEIKLERPGIAGTAIRPDNKIAATAGWDHRIRVYSYSKGNALAVLKYHSASCNAVTFSSDSKLLASCSADTTVALWELYPPKTDSQVGLKTRDEISQ</aaseq>

Gene Sequence

<dnaseqindica>1..134#281..343#421..489#870..926#1754..1908#2038..2093#2237..2330#3124..3187#3414..3496#3620..3711#4405..4511#4775..4838#5007..5147#ATGGCCCTGGCCGAAGCCGAGAACCCGCCGCGCCGCCGCCGACCTGCGCCGGACCCCGTCGCGGTGCTCCGAGGCCACCGCGCCGCCGTCAACGACGTCTGCTTCCACCCCTCCCTCCCGCTCATCTTCTCCGGGTACGCTCTCCCCTCGACCCCCCAAAACCCCCCTTGCCTGATTCTCCGCCGCAGCAGCGCGTGTGTATGAGCCCTCGCGCTTGTGATCACGCTCTCGGTAACATCTCCTCTGCTTTTTTGCATTTTGGGGTTTGCTCTTCATCCAGCGCGGCTGACGGGGAACTCAGGGTTTGGGACACAGCGAGCCACCGCACTGTCTCCTCGGTTTGGTAATTTATTTCCGCGTCAACGATTATGGTTGGTTCGTTTTGAGGGATACTTGATGCGAGGGCATACGATTTTGCAGGGCTCATGGTGGATCGGCTGGTGTATATTCAGTGGCTGCTAGCACCAGACTTGGAAACAAAATCATTAGGTGAGTGAACAGAGGTGATTTTTTCAGGAGTTGCTGGCTGTAGGTTTGCATCATTATAGGATGCTATTGCAACAGGCTAGATAAGAAGCATCCGTAGCTGTTATGCGTTAAAACATCGGGTTGAATCAGTGTAATATTTTCGATTTGAGTACACAGCCTTTTCGGATCGGAATTGCATTGCAAGTAGGATTGAACCTCTTCATATCATATATGACCGTATTATCTTTCTGATTATTCAGTCTAGACAGCATCAGCGCATTGTACTATACAGATGGAACATAAAAATAACTTTAGTAGCATATTTTGAGTTGAGTGCCTCTCACATTGTTACGATTTGGATTGAATTTTGATCGATATATCTGTTTCTGATGCTGAGGCAGTCAAGGTAGGGATGGATCATGCAAATGCTGGGAAATCGAGGAAGCTGGGCTTTCACGGTATGACTCATTGCACATGAAGTGTAATAGGAGTTAGAATTGGATCTTTCTTTGGATGGAACATGCTAAGGATTGACATACAATTTTTAAAAAGAAAAAATAGAACATGCTACCTTTAACATAAATTAGGACTTGGTTAATAGTAGGCTTTACCAATGTAAATGCAAGGAGAAGAAGACATGGGCATACATATAGACAAAAGATATTTTGAATACTAGAAGAGATATACAACCCATCAAGAGAAGTCTTTGCAAGACAACTTTTACTCCTACACATGTAGGCCTCATTAGGTTTGATGCCACCAAACCAAGTGTATCTATCCTGAAACTACCTGCTATATACTCCACCATTTATTGCATCTGCTCCACAAAGTCCATCTGCTCAGGTAATTGGATACTCCATCCTGTTGTCCTCATTCTGCTGCAAGTGCATCCACCAGAGCATAAGTGTAATGCTATTAATGTTTTGTCAGTATATTTAACCTGATTATAGTCTGTAGGGCAGGTCCCCATATGCCTCTTGAAGATCTTATAGCTCTTAAATAATAAAAGAATATATATACCAACTTAGTGCTATCATATTCTTGTGTCAATGGACTTTACATGATCTGTAGTGGTAAATTGATGAAGAAACTTAAACAAACTAGTCAGAGCCTCCTCGGTATTTGTTGACTAGCACCTTGTCCTAATTAAGATGATAAGTGTAAGGTCCAGAAGGAATATGGTAAAACACATACTTGTCAACCTTCTTTGTTTGAGCTGTGTTTCATTTGTGTTTCTTATTTGAGTTTCCGTGGCATGCAAATCCAATTTCTTGGGTTCTTTCAGGAGGGCCCTATATACAATCAGAACAAGTACATACCATTTCTGCAAAATGTCACTCGTTAAGTCAACATGTTCTACATGCTGCACACAATCTGGCTTGATCTCCGCAACTGGTGATATTGAGTCACAAAGCACAGTTACTGAAGAACGTGAACTAGGTAGTGCATGATTTCAGCATCTCAAATAAAAGAGAGCAACTAGAAACTTGATCACTCTTGACAAGAAATTGGTGTCAGAGAACTCCTTAGTGACTCTCTTCATGATTGACTTAATGGTGTATTTCCTAGGCACTTGCTGTAAAGGACCAAATATAATGGCAATCGCTGGTCAAGAATCATCGCAGGTTAGTTTTTAATCTTGACTTTGAGCAAAACATAGCGTGATGCAATAGAACATAACTAATTCATCGTTTTTTTTGTGCCTACATATTTTCTTGCCCTGTTTTCAATTTTTTCATGTTGTCACTAAATAACAAAGTGAATACAGGTTGAACTTTGGGATATTGATAACGCAATAAAGGTAATGTGCTTGCCTGAAACAGGCAGCGCTAATCTGGCTGATCACCCGACCAAGCAAAGAGGTTCATCTCCACAACTTCTGCTGTAATTGTTTTGTCTTATGAACCATACCAAATGTAGGTTGAGCTAGCATAAGGTGGTACGTCTGGTGCCGATCTGATCTCTTGCTTGGTAGAACCTTCAAGCATTTATACTCCTAGGTTCTGGTTAGCCCTCACCATGTCTTTGGTGCCATATTTTTTAAAGCATAATGTTAGTTTTCAAGAAATAGTCGGAAGAAGCAGGAACTTGATGATAAATTAGGAGCTGCATTGGTGATTATAGACTGGCTGTTGGCATTGTACTAGGACAAGGATACCTTTGTCATTGCCTTGAAGGATAAATACTTGCTGAGCATAGCTGTATCTTTGTGTATTTGGCTTAACAGAATTATTTACGAGCCGTGTCACTATTTTACTTCCTTATGCACAATACCGAGTGTATTCATGCTAGCGTAGCATCCCATGATGCTGTCCCATCCAGCAGGAAATTGTCAAATCCTGCCGTCAGCCAGAAATATGTGCTTTACAAGTCACTGAAGCAAATGTTTCATAGATGTGGTTTAGGATGAATACATCTTCTATGATATGAGACTGCACGTATGTTCTTCAGTTCTTCACTGTAGTAGCTTGCTAAGTTCACGAAATTGCGCTTCACATCAATTTATCTATTATAGCTAGTGTGCTGTTATGCCGCTCTGCATTTGCACACTGCAGGACATTTATAACAATTCATTTGAATTGCCCAATGACATTCGTTTTTCCCTTGCATTCATGCTTTAAGTAATCCTTGAAAACTTCATGCTGTTGATTGTAGGACTATGCATGGCTGTGCAAGCTTTCTTCCCTTGTGGTGCAGCTTATGTAAATATTTTGTCAAGGTTTGTGTCCAGATATTTTTTTGTCAAGGTTAAGCGTGCAAACCCAAGCACATTTATTAACAGCCATTACCTAGGCTCCTGTTTTGCCACGGCAGAAAGCCTTTTATCCCAGTTGTTGTTGTTTAACAGTGTGTTTTTCCCTTGCATAAAGAAAACAAATGTTCCTTTGCTTAACATCTTTTGGACTGTTCTCATTTTAGTAAACCTTTGCTTTTATGGTGATCAGTTACGAAGATGGAAGCACACTTTTGTGGGATGTACGAAATCCTGGTCTACCTGTATCCTCAGTGAAATATCACTCAGAATCAGGTTGCTCTCCATTCTGAAAATTACTATTTTAGTTATTTAACCTATCCTTTTTTCAGTAGTAGCTATGTTTATATCTTTGGTGTTTGGAAATAATGTATGATCTAATAAGAGTCTGGTGTGCAGCTTTATCCATTGCTATTGATGGGCTATGCAATGGGGGGATCTCAGGAGGTGCTGATGATAAAATTGTCATGTTTGGCCTTGATCATCAAAAGGTGTGCACCAAATTTTCTGATTTCCTGTTTCCTGCTACACAAATCTTTACTCTTGTCGTGAAAGGTGCACCTTGTGAGTACAAAAAACCATGTTATGTACATGCAGTACAAAGCTAGCCCAAGTTGACATTGATTTTATGCTTTCTCTGATGTCGTGCTATTAATTATCTCCAATTATCTGCTAGTCATTCAATTATATAAAGAAATAAGCTGCTAAGGAGATCTTTGCATTCATTATTTTTCTGTAATATTGACTTCAACGTCATCTGCTATTGTCTTCTTGACAAGGTTCATAAGCATTTCAATTTCCTAAATGATGCAGTATACTGAAGGTTAAGTTTAGCAGTGTTTAACACTCAGAAGTAGGCCTAGAGTTGGAGACTGCACTATTATCCTTCTGATATCCACTTCTGACATCTGTGATATTTGAATCCCTTCATATCTGAAGCAAGAAACACGCGCACAACCATGGTTTTTTTATTAGCTAGATGGGTAGTAATTCTTTTCCTCAGGGAGGATAGTAGTTATTTCCAGTTACAGGCATATAAACATTCTACATTTCATAACAAAATTATCACCGCTGGAAAATGCATTTGCTTCTGTTGTAGCTTTTGCAATTACATTAGTGAATGCTGGTTTAACTTGGTAAGCCATCTTTTGATTTACTGGCATGCAGTTTTGTTCCAATTACAGGGTGCATTTATTCTCAGGAAAGAAATAAAACTTGAGCGACCGGGTATAGCAGGCACTGCAATTCGGCCAGACAACAAGATTGCAGCGACCGCTGGTTGGGATCACAGGTTTGTTTTTCCCATTCTGTTCCTTGATGACCAGGATGTTAACATAAGCTATTTTTAGTGGCTTCCTAAATCCTGAATTAACATGCTCAAGTTAGTAGGTACATTATACATATGATTTAATATATATAATCTATTAAGTAGTAATACCTGAGTGACGAGTACAAATTGTACTAATGATGGCTCCTTTGTGATTTTGGTCGCTACTAATCTTGTCTTCTAGTTGATGATTATGATCCAAGTTTGCAATTGTTACATCATTGCAGGATTCGTGTGTATAGCTACAGTAAAGGAAACGCTCTAGCAGTGTTAAAGTATCACAGTGCTTCGGTATGCAGCTTCTCTCATATAATAACATTTTCTTTCAAAATTTACCATGCTGTTTTTCCTCAGCTCAAAAGGGAAGGAATGCCTGTCGGTCCCTGATATCACCTTATATTGATCGTTCAGCCAAAGCTTCACGGAACATAACTTTGTGTTCGTCCTTTTGGCTTGCAGTGTAATGCAGTGACATTCTCATCGGACTCCAAGCTGTTGGCTTCCTGCTCGGCGGATACTACGGTTGCATTATGGGAGCTCTATCCTCCCAAAACAGATAGCCAAGTTGGTCTCAAAACGAGAGATGAAATATCCCAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022238

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA022238&oldid=44763"