BGIOSGA022248

From RiceWiki
Revision as of 13:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022248| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022248, complete gene.| tag = OS06G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022248

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022248, complete gene.

LocusTag

OS06G0134700

Ensembl Transcript ID

BGIOSGA022248-TA

Ensembl Protein ID

BGIOSGA022248-PA

Length

3265

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2030649..2033913

Sequence Coding Region

2030649..2031078,2032101..2032361,2032446..2033321,2033444..2033913

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2030649..2033913 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2030649..2033913 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCTCCTCCGCGCAGCTCATCTTCCTCCTCCTCCTCGCCGTTCTTGCCGCCGCCTCATCGCGCAACGACGAGGAGGCCCGCGCGCTGATGGCGCTCAAGGAGAGCCTGGACCCGGCGGGGCGGGTGCTGGGCTCGTGGGCCCGCTCCGGCGAGCCCTGCGGGGGCTCGTTCGTCGGCGTGACGTGCGACAGCGGCGGCCGCGTGACGGCCATCTCGCTGCAGGGCCGCGGGCTCTCCGGGACCCTCCCTCCGGCGATCGCCGGGCTCCGGCGGCTCACCGGGCTGTACCTCCACTACAACGGCATCAAGGGGGCTATACCCAGGGAGATTGGGAGCCTCTCGGAGCTCACCGACCTTTACCTCGACGTCAACCACCTGACCGGGCCACTGCCCGTGGAGATTGCCGCCATGGAGAATCTCCAAGTTTTGCAGCTGGGTTACAATCAGTTGACAGGCAGCATACCACCCCAGTTAGGCAAGCTCAACAAGCTTGCTGTTCTTGCACTTCAGTCCAACCAGCTGACTGGGGCCATTCCAGCAACACTCGGCGACCTAACACAGCTTGCACGGCTTGATTTGAGCTTCAACAGTCTTTTTGGTTCCATCCCTTCAAAGATTGCTGAGGTTCCATTGCTCGAGGTCTTTGATGTTCGCAATAATTCCCTTTCTGGGAGTGTCCCAGCAGGATTGAGAAGACTGAATGGTGGGTTCCAGTATGTGAACAACAAAGGTCTTTGTGGAGTTGGCTTCAGTTTGCTTGATCTTTGTTTGTCATCGGAGGATGGCTTGAAACCTAGTAAACCCGAGCCTTTTGGCCCAGATGGTACTGTCAAGACAAGGCAAGTTCCTCAATCAGCGAATACGGACAATCACTGTGAGGGATCTGGTTGCTCGAAATCTTCGAATGCATCTGTGGGAGTGCTTGTTGTTGGTGTGGTTGCAGTGGTGATTGGCGCCGCATTCTGCGGAATATTTGCATTCTCATATTACCGCCGGCAAAAGCAGAAGATTGGCAGCTCACTGGAGGTTTCTGATAGCAGGCTCAGCACTGACCATTACCAACAGAAGGAAGTTTGCCGAAGAAGTGCTTCCCCACTTATCAGTGTTGAGTACTCGAATGGATGGGACCCTTTGTCTGGTGGAGGCGTTGGGTCATCCGGCGAGGTTGGTGATAGCTTTAGGTTCAACCTTGAGGAGGTTGAATGTGCAACTCAGTACTTTTCTGAGGTTAATTTGCTGGGTAAAAGTGGCTTTGCTGCGACATACAAGGGAATTCTACGAGATGGATCTGTTGTCGCTGTTAAGAGTCTCAACAAGACAAGCTGCAAGCAAGAAGAGTCAGATTTCTTGCGTGGCCTCAAGATGCTCACCGTGCTGCGACATGAGAACCTTGTTGGCTTGAGGGGTTTCTGCTGCTCCAGGGGGAGGGGAGAGTGCTTCCTTGTCTATGATTACATGGTTAATGGTTGCTTGTCACAGTATCTGGATGTTAAGGAGGGTTCTGGTGCTAATGTCCTTGATTGGCCAACAAGAGTTTCCATAATCAGAGGCATTGCAAAAGGAGTTGAGTACATGCACAGTAAGAAAGCTAACAAGCCATCAGTAGTGCACCAGAACATATCGGCCGAGAAGATCCTTCTCGACCACCACTTAACGCCACGCTTGTCGGTCCCAGGGCTGCACAAGCTCCTTGCTGATGATGTTGTCTTCTCGACCCTGAAGGCCAGCGCAGCAATGGGATACCTTGCCCCTGAGTACGCCACTACGGGCCGATTCACTGAGAAGAGTGATGTTTTCGCATTTGGTATCGTCGTTCTCCAAGTCATCACAGGCAGGAGGGCTGTCTCACAGCTGAAGGTCAGCACAGTTGCCAATGACCTTGATAGCCTGATCGATGAGAACCTCAATGGTGTCTTCTCAAGAACTGAGGCAGCTAAGCTTGCTGCCATTGCTGCACTTTGCACAAGCGAGACGGCGAGCCAGCGTCCAACAATGGAAGCTGTGGTTCAGCAACTCAGCAACTGCCACTGA</cdnaseq>

Protein Sequence

<aaseq>MAASSAQLIFLLLLAVLAAASSRNDEEARALMALKESLDPAGRVLGSWARSGEPCGGSFVGVTCDSGGRVTAISLQGRGLSGTLPPAIAGLRRLTGLYLHYNGIKGAIPREIGSLSELTDLYLDVNHLTGPLPVEIAAMENLQVLQLGYNQLTGSIPPQLGKLNKLAVLALQSNQLTGAIPATLGDLTQLARLDLSFNSLFGSIPSKIAEVPLLEVFDVRNNSLSGSVPAGLRRLNGGFQYVNNKGLCGVGFSLLDLCLSSEDGLKPSKPEPFGPDGTVKTRQVPQSANTDNHCEGSGCSKSSNASVGVLVVGVVAVVIGAAFCGIFAFSYYRRQKQKIGSSLEVSDSRLSTDHYQQKEVCRRSASPLISVEYSNGWDPLSGGGVGSSGEVGDSFRFNLEEVECATQYFSEVNLLGKSGFAATYKGILRDGSVVAVKSLNKTSCKQEESDFLRGLKMLTVLRHENLVGLRGFCCSRGRGECFLVYDYMVNGCLSQYLDVKEGSGANVLDWPTRVSIIRGIAKGVEYMHSKKANKPSVVHQNISAEKILLDHHLTPRLSVPGLHKLLADDVVFSTLKASAAMGYLAPEYATTGRFTEKSDVFAFGIVVLQVITGRRAVSQLKVSTVANDLDSLIDENLNGVFSRTEAAKLAAIAALCTSETASQRPTMEAVVQQLSNCH</aaseq>

Gene Sequence

<dnaseqindica>1..430#1453..1713#1798..2673#2796..3265#ATGGCCGCCTCCTCCGCGCAGCTCATCTTCCTCCTCCTCCTCGCCGTTCTTGCCGCCGCCTCATCGCGCAACGACGAGGAGGCCCGCGCGCTGATGGCGCTCAAGGAGAGCCTGGACCCGGCGGGGCGGGTGCTGGGCTCGTGGGCCCGCTCCGGCGAGCCCTGCGGGGGCTCGTTCGTCGGCGTGACGTGCGACAGCGGCGGCCGCGTGACGGCCATCTCGCTGCAGGGCCGCGGGCTCTCCGGGACCCTCCCTCCGGCGATCGCCGGGCTCCGGCGGCTCACCGGGCTGTACCTCCACTACAACGGCATCAAGGGGGCTATACCCAGGGAGATTGGGAGCCTCTCGGAGCTCACCGACCTTTACCTCGACGTCAACCACCTGACCGGGCCACTGCCCGTGGAGATTGCCGCCATGGAGAATCTCCAAGGTGAGGTTTCTATGCTGCGTTCTTCAGTTCTTGTACTATTTCGTCTCCAAGATTGCATTTCTTGGGTTGAACCTTCGTTTTTTTTGTTGGGTAGATGGGGTTTGCATTTGATTTATGGTTCTTTGTTTTCTTAAAGATTGTTCGGTACTTCTTCTTGTTTCTTGTGATGCTTTTCAAATAAAACTGGCATAAAAATGTCGCTTAGGAGAATGGAGCAGTGAAGCCTTCCATTTTCCACGGTTTCAAAAACCAATGATGTACTAGTAGTCTACTAGTTCCAACTACTCCTTGGTTTGGTATATAAATGCTCCATTTTTGTATTCCATTTTTCGTCAGTTTGTGGCGGGATTTTGGCATGAATCGGTACTTTTAGTTTTGGGTTCATTTATTAAGCATCAGTACAATGGTTGATTTTTGAAATGGGGCAGTTTATCTGTTATCAAATCCGATTTGTATGTTTCTATTCCGATTCTTCTCTTGGAGCATTGCGACAGTCACGTGTTCATCCATTTTGATTTGATTTATCCTGACTGAACTGCTGCTTGGTTTATTAGAACCCCACTTGTCTCTGGTTTAGATTTTTGTGGTAACTTCAGGTTGAATCTTGGTACAAAACACTTTACAGTGCATTATGAACTTCTTTGATTTGATTTACTACTCGGCTGTTTCTGTCCAATGTTTGTGCCTTTTCTGTAAATAAATCCAGTAAAGAACAAGTGACATTTTGTTCTTCTGCTGCCTTGGCTCCTTCCTTCAGATTTCAGAATCTGCACATATATCTCATACTTGTTGATTAGGCCTTCGTCGAGCATGTGATGCTTCTGTTCATGTTTTGGAAGTCTACGTACCAGTGCCTGCTGTTCCCTAGTTGTTAAAGAGTCAAATATTATTTTCTGCCACTAGATCTGTTTCAAAGATTCAATAATATGATACATAGACTTCGCAATGGCTCATTGAGAATCAAAAGTATGATATGATGTGGTGCAGATTTTTTATGTAGCATTTCTTTCTCTTTTTTGCAGTTTTGCAGCTGGGTTACAATCAGTTGACAGGCAGCATACCACCCCAGTTAGGCAAGCTCAACAAGCTTGCTGTTCTTGCACTTCAGTCCAACCAGCTGACTGGGGCCATTCCAGCAACACTCGGCGACCTAACACAGCTTGCACGGCTTGATTTGAGCTTCAACAGTCTTTTTGGTTCCATCCCTTCAAAGATTGCTGAGGTTCCATTGCTCGAGGTCTTTGATGTTCGCAATAATTCCCTTTCTGGGAGTGTCCCAGCAGGTAATATACCCTTTTATTACCTTTCTTGAGTAAAACTTTTGCTATGTTTATATTTATCACTGTAACTTGTTGTCTGGATGCTAGGATTGAGAAGACTGAATGGTGGGTTCCAGTATGTGAACAACAAAGGTCTTTGTGGAGTTGGCTTCAGTTTGCTTGATCTTTGTTTGTCATCGGAGGATGGCTTGAAACCTAGTAAACCCGAGCCTTTTGGCCCAGATGGTACTGTCAAGACAAGGCAAGTTCCTCAATCAGCGAATACGGACAATCACTGTGAGGGATCTGGTTGCTCGAAATCTTCGAATGCATCTGTGGGAGTGCTTGTTGTTGGTGTGGTTGCAGTGGTGATTGGCGCCGCATTCTGCGGAATATTTGCATTCTCATATTACCGCCGGCAAAAGCAGAAGATTGGCAGCTCACTGGAGGTTTCTGATAGCAGGCTCAGCACTGACCATTACCAACAGAAGGAAGTTTGCCGAAGAAGTGCTTCCCCACTTATCAGTGTTGAGTACTCGAATGGATGGGACCCTTTGTCTGGTGGAGGCGTTGGGTCATCCGGCGAGGTTGGTGATAGCTTTAGGTTCAACCTTGAGGAGGTTGAATGTGCAACTCAGTACTTTTCTGAGGTTAATTTGCTGGGTAAAAGTGGCTTTGCTGCGACATACAAGGGAATTCTACGAGATGGATCTGTTGTCGCTGTTAAGAGTCTCAACAAGACAAGCTGCAAGCAAGAAGAGTCAGATTTCTTGCGTGGCCTCAAGATGCTCACCGTGCTGCGACATGAGAACCTTGTTGGCTTGAGGGGTTTCTGCTGCTCCAGGGGGAGGGGAGAGTGCTTCCTTGTCTATGATTACATGGTTAATGGTTGCTTGTCACAGTATCTGGATGTTAAGGAGGGTTCTGGTGCTAATGTCCTTGATTGGCCAACAAGAGTTTCCATAATCAGAGGCATTGCAAAAGGTATTTCCCACTCAAGCATTATCTTTTCCAGCTTTATCTTCATTTACCTCTGACTGATATGGCCATTCAAGTATTGTCGGTGTCGGTGGTGTTCTAATGCTTAATCTGATGCACATTTGCAGGAGTTGAGTACATGCACAGTAAGAAAGCTAACAAGCCATCAGTAGTGCACCAGAACATATCGGCCGAGAAGATCCTTCTCGACCACCACTTAACGCCACGCTTGTCGGTCCCAGGGCTGCACAAGCTCCTTGCTGATGATGTTGTCTTCTCGACCCTGAAGGCCAGCGCAGCAATGGGATACCTTGCCCCTGAGTACGCCACTACGGGCCGATTCACTGAGAAGAGTGATGTTTTCGCATTTGGTATCGTCGTTCTCCAAGTCATCACAGGCAGGAGGGCTGTCTCACAGCTGAAGGTCAGCACAGTTGCCAATGACCTTGATAGCCTGATCGATGAGAACCTCAATGGTGTCTTCTCAAGAACTGAGGCAGCTAAGCTTGCTGCCATTGCTGCACTTTGCACAAGCGAGACGGCGAGCCAGCGTCCAACAATGGAAGCTGTGGTTCAGCAACTCAGCAACTGCCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022248