BGIOSGA022255

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Revision as of 13:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022255| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022255, complete gene.| tag = P0548D0...")
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Gene Name

BGIOSGA022255

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022255, complete gene.

LocusTag

P0548D03.22

Ensembl Transcript ID

BGIOSGA022255-TA

Ensembl Protein ID

BGIOSGA022255-PA

Length

3478

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2119696..2123173

Sequence Coding Region

2119696..2119778,2119901..2119947,2120056..2120128,2120598..2120718,2120829..2120966
,2122273..2122389,2122481..2122549,2122653..2122748,2123024..2123173

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2119696..2123173 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2119696..2123173 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTGTCCGCGGCGGCGCCGGCGAACTCCTCCTGCTTCCACCCGCGCGCCGCCGCCGCCAGCGCGCCCTCATCTCTCAGCGTGGGCACCAAGGTCTTCGTCGGGTTGAAGGCCCAGACCAAGCTAGGCTCGTCGGAGTCGTCGTGCCCGAATGTCACCGCCGGGTTCTACACCGCCGTCAACCGGAGGATCTCTCTGGGATTATCAAACAAGAGGGCTACCAGGGCGCGCATTTCAATGATGCCTGTTGGTACACCACGGGTGCCTTACAGAACACCTGGTGAAGGAACTTGGCAATGGCTTGATATATGGAATGCTCTATATCGCGAACGAATTATCTTCATTGGGGACAGTATAGATGAAGAGTTTAGTAACCAAGTATTGGCGAGCATGTTGTATCTTGACAGCGTTGATAACACTAAAAAGATTCTTCTATACATTAATGGTCCAGGAGGAGATCTTACACCATGCATGGCATTATATGATACAATGCTAAGCCTAAAAAGTCCTATTGGTACTCATTGCCTGGGCTTTGCATTCAACTTGGCAGGATTTATTCTTGCAGCTGGTGAAAAGGGTTCACGTACGGGTATGCCTCTTTGCCGGATTTCACTTCAGTCACCTGCTGGAGCAGCTCGAGGGCAGGCTGATGATATAGAAAATGAAGCAAATGAACTTATTAGGATCAAGAACTATCTTTACAGCAAGTTGTCAGAGCACACAGGTCATCCTGTTGATAAGATTCATGAAGATCTATCTAGGGTGAAGCGCTTCGATGCTGAAGGAGCTTTGGAATATGGGATTATTGACCGTATTATTAGGCCTTCTCGCATCAAGAAAGAGGGATCCACTGCTCAAAAGAAGGATCTACGTAATCTGGGACTTGGCTAG</cdnaseq>

Protein Sequence

<aaseq>MALSAAAPANSSCFHPRAAAASAPSSLSVGTKVFVGLKAQTKLGSSESSCPNVTAGFYTAVNRRISLGLSNKRATRARISMMPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDSIDEEFSNQVLASMLYLDSVDNTKKILLYINGPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCRISLQSPAGAARGQADDIENEANELIRIKNYLYSKLSEHTGHPVDKIHEDLSRVKRFDAEGALEYGIIDRIIRPSRIKKEGSTAQKKDLRNLGLG</aaseq>

Gene Sequence

<dnaseqindica>1..83#206..252#361..433#903..1023#1134..1271#2578..2694#2786..2854#2958..3053#3329..3478#ATGGCGCTGTCCGCGGCGGCGCCGGCGAACTCCTCCTGCTTCCACCCGCGCGCCGCCGCCGCCAGCGCGCCCTCATCTCTCAGGTCAGCCGCCTCCCGCTAACTCCTCCCCGTTTCTCCGATCCCCAAACCCCCAAAACCCTAACCCTCCCTGCAACTTCTGCTCTTCGTTTTTTTTTATTTTTATATCTCTCCCCTTTTTGCAGCGTGGGCACCAAGGTCTTCGTCGGGTTGAAGGCCCAGACCAAGCTAGGTGAGCGAGGAGCTAAAAAGATTAATTCTCGAATTTATGTCGGATTCGTCCTCATTGTTGTCGATTGTTTGATTTTTGGTGTTTGTGGGGTTGGAAATTGCGGTGCAGGCTCGTCGGAGTCGTCGTGCCCGAATGTCACCGCCGGGTTCTACACCGCCGTCAACCGGAGGATCTCTCTGGGGTACGTAACAAGTGCGCAGCCATCGATATGCTCAACTTGATGTTGGGGGGCATCGTGTATGTGTTATAATGTGGGAAGGATAAATGGGATTGTGCTACTGCACAATCTTCAGAGTTCAGCAACTCTTCATTCTGGGTGCTGATTATGCTTGTTGTGCTAGTTCAATTTTTTTGTTATGCGTCGCACTTTTCATGCAAGTGTCTGTAGGTTTGTTAGTATGTGAAAGGATACTTTTTGTAAAATCTAATAGCTCTGGGCATTTGTCTGTGTTGATGGATAATTTTGCAATTTTCAAAAGCCAATTTTCAACACCCATCAGGTTTATAGGCAATATTTTGTTCTAACAATAATATGTATGTTTGTTAGCGCTTGAGGTAGCCAAAGAATATCTGAATAATGTCGGTGTAGTTTGTCTGAATTGTTTGTTCACTTATTTTATCTCATTGCACTTCAAATTAAAATTTGCTAGATTATCAAACAAGAGGGCTACCAGGGCGCGCATTTCAATGATGCCTGTTGGTACACCACGGGTGCCTTACAGAACACCTGGTGAAGGAACTTGGCAATGGCTTGATATATGGAATGCTCTAGTAAGACTACACAATGCCTAATGGAGTATGATGCTTCCTTGAAGTGGTGCATCTATTTCTATCTGTGTGACTGTATTAATGTTTATCTAATTCAAATTGTTCATGTGCAGTATCGCGAACGAATTATCTTCATTGGGGACAGTATAGATGAAGAGTTTAGTAACCAAGTATTGGCGAGCATGTTGTATCTTGACAGCGTTGATAACACTAAAAAGATTCTTCTATACATTAATGGTCCAGGAGGAGATGTAAGAACTTAACATACCACACCTTGTGTTAGCTTCAATTAGCCTTTTTTTTATGCCACTTATTTTTATGAGTAAATTGCGTCTATAGTACACAAACTTGGTAAGTGGGTGCGATCTAGTGCAAGAATTTGAAAAATGATTATACAGGTGTAACAACTTGGTTAGTGCGTGCATTTTGGTTAAAAGATCTCTCTTCCAAACCATACTTTTTCAGCTATGTAAAGAAAAAGCAGCCAGTTAGATCATCTTGAGTTCTGAACAAGGTTTTAGATGTATTGCATTTGCTTGGTTATCATACTAAATAATCTACTATTTAAAATTGGAAAAAAATAATGATTATCAAAACTAAGTGCATGCCAACTAACAAAATTTCTGAGCGATCCAACTAATAAAAAAAATCGGTGATGAGCACTGCAAAACATTCTCATTGCCAACAATTAATCTAGCAGTTATATATGTTTACAATACAACCAATAAAATACGATGAATCATTGGTATGTAACAGTGTTTTTATCAAAATGCACGTGATTGTTAAGTTTATGTACCGGTTTGCTCATTTTACAAGTTTTTACACTAAATCGCACCCACCTGCCAAGTTTTTGTACAACTGGCGCAATTTACTCTATTTTTATATATGTGGATATGCCAGGCCATGATTTTGTGATTTTCAAGTAGCATTGTCACTTTAAGAAATTGAACCGGGGTGTTATTTCAAAAGTTTAATAAAACTGGGATGAACTAATCAGTTGCTAACACCGCATGTATAGCTCATTGAAGGGGCTTCCTGCGTTCCAGTGCTACTTTGTGGTTTGTAAGTTAGAATGTTTGGGATTGTCCGAATATATGATCTTATTTTTCAGTGTTGTACATGTTGACAAAACCGATACAAAAACTTATGTATCTAACTATTTATATTGGATCAAAACACTTATCCTGGAAAGAGGGCCACTCTAGTCATGATAATCTAGGACGGGGGAAAGTTATGACAACATGATCCTTCAATTGTTTGGAAAATTGTTTTACTTTAGATGATATATATCAGACCTGGTATGGAAAGAAAGTTTATTGGAATTCAAAATCAACTGGAAATCAATGTGCGCAATGCTCACTGAGCATAACAAGAGTACTTTAAAACCTATGTTCCTCAAGTATACCTTATCAATATGTCAAATGTTTGTTTCAATGTTCCAACTAGTTAACCGAGATATCTAACCAAGTCAACTTACTGTTAGCTAATCTATGTCGCACACTGCATTTTTTTCTGGGGGAGTGACTTTCTAAACTGTATTCATCAATGATGTTGCAGCTTACACCATGCATGGCATTATATGATACAATGCTAAGCCTAAAAAGTCCTATTGGTACTCATTGCCTGGGCTTTGCATTCAACTTGGCAGGATTTATTCTTGCAGCTGGTGAAAAGGTATCACTACTCTAATATCAACCTCATTTTGGAATTTGTCTTGAGTATGCTAAGTCATTATACTCATTTTCTTGCCCTTTTTTATGATAAGGGTTCACGTACGGGTATGCCTCTTTGCCGGATTTCACTTCAGTCACCTGCTGGAGCAGCTCGAGGGCAGGTCGGGGTTCTTCGTAGATGGTTTGCTAAGTGGTTAAAGTTGGGAGTGTCTGGCAACACAGCTTTGAATTGAATTGGTTTCTTGCACACTCTTTTCCCTGCAGGCTGATGATATAGAAAATGAAGCAAATGAACTTATTAGGATCAAGAACTATCTTTACAGCAAGTTGTCAGAGCACACAGGTCATCCTGTTGATAAGGTAAGAATTTCGCTGTGCATGCTGCTGTTACATTGTTTGGCACTATCTCCTATGATTTAGAATGCCTAGTTACTCCAAAGAAGAGATTTTGGTTGTTTATTGCACCATTCCCTATTGATCAAAAGGCTCATTCAAGCTTGGTTTATTCTGTTTCCTTGTATCTCATACTGAGGCAATAATCTGATCCAGATTACCAAGTTTCTATTTTCCATGTACACGCAAAATTGTCATGCAATTGCAATCCTTCCTTTCATCTTAAGCATTTCTTGTTGCAGATTCATGAAGATCTATCTAGGGTGAAGCGCTTCGATGCTGAAGGAGCTTTGGAATATGGGATTATTGACCGTATTATTAGGCCTTCTCGCATCAAGAAAGAGGGATCCACTGCTCAAAAGAAGGATCTACGTAATCTGGGACTTGGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022255