BGIOSGA022272

From RiceWiki
Revision as of 13:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022272| Description = cDNA clone:001-103-D07, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA022272, complete gene.| t...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022272

Description

cDNA clone:001-103-D07, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA022272, complete gene.

LocusTag

OsJ_20069

Ensembl Transcript ID

BGIOSGA022272-TA

Ensembl Protein ID

BGIOSGA022272-PA

Length

1038

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2288356..2289393

Sequence Coding Region

2288356..2288772,2288884..2289393

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2288356..2289393 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2288356..2289393 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGGATCTCGGCCTCAGCCTCGGCCTCGGCCTCGCCTCGCAGGGCAGCCTCACCTCCTCCACCACCACCACCTCCTCCCCCGGCGCCGGATCATCCTCCCCGTGGGCCGCCGCGCTCAACTCCATCGTCGGCGACGTGAGGCGGGATCAGGCCGCGGCGCATGCTGCCGCGGCGGTGGGGGTTGGGGTTGGGGGCGAGGAGATGTACCAGGGGAGGGCGTCCACGTCGCCGGACAGCGCGGCGGCGCTGTCGAGCGCGAGCGGGAAGAGGGAGAGGGAGCTGGAGCGGTCGGGATCCGGGGTTGACGACGACGACGGCGCGGACGGCGCCGGCGGGCGGAAGAAGCTCAGGCTGTCCAAGGACCAGGCCGCCGTGCTCGAGGAGTGCTTCAAGACGCACTCCACTCTCAACCCCAAGCAGAAGGTGGCGCTGGCGAACAGGCTGGGGCTGCGGCCGCGGCAGGTGGAGGTGTGGTTCCAGAACCGGAGGGCGAGGACGAAGCTGAAGCAGACGGAGGTGGACTGCGAGTACCTGAAGCGGTGGTGCGAGCGCCTCGCCGACGAGAACAAGCGCCTCGAGAAGGAGCTCGCCGACCTCAGGGCGCTCAAGGCCGCGCCCTCGCCGGCGTCCGCGTCCGCGATGCAGCCCTCCTCCTCCGCCGCCGCCACGCTCACCATGTGCCCCTCCTGCCGCCGCGTCGCCACCGCCGGCGCGCCGCACCAGCCTAACCACCAACAATGCCATCCCAAATCTAACACCACCATCTCCTCCTCCTCCACCGCCGCCGCCGCCGTCGCCGTCGCCGGCGGCAACGTGCTGCCCAGCCACTGCCAGTTCTTCCCGGCCGCCGCCGCCGCCGCCGACCGGACAAGCCAGAGCACGTGGAACGCCGCCGCGCCGCTCGTCACCAGAGAGCTCTTCTAG</cdnaseq>

Protein Sequence

<aaseq>MMDLGLSLGLGLASQGSLTSSTTTTSSPGAGSSSPWAAALNSIVGDVRRDQAAAHAAAAVGVGVGGEEMYQGRASTSPDSAAALSSASGKRERELERSGSGVDDDDGADGAGGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLRALKAAPSPASASAMQPSSSAAATLTMCPSCRRVATAGAPHQPNHQQCHPKSNTTISSSSTAAAAVAVAGGNVLPSHCQFFPAAAAAADRTSQSTWNAAAPLVTRELF</aaseq>

Gene Sequence

<dnaseqindica>1..417#529..1038#ATGATGGATCTCGGCCTCAGCCTCGGCCTCGGCCTCGCCTCGCAGGGCAGCCTCACCTCCTCCACCACCACCACCTCCTCCCCCGGCGCCGGATCATCCTCCCCGTGGGCCGCCGCGCTCAACTCCATCGTCGGCGACGTGAGGCGGGATCAGGCCGCGGCGCATGCTGCCGCGGCGGTGGGGGTTGGGGTTGGGGGCGAGGAGATGTACCAGGGGAGGGCGTCCACGTCGCCGGACAGCGCGGCGGCGCTGTCGAGCGCGAGCGGGAAGAGGGAGAGGGAGCTGGAGCGGTCGGGATCCGGGGTTGACGACGACGACGGCGCGGACGGCGCCGGCGGGCGGAAGAAGCTCAGGCTGTCCAAGGACCAGGCCGCCGTGCTCGAGGAGTGCTTCAAGACGCACTCCACTCTCAACCCCGTAAGCATCCGCCTCCTCCTCACCTTCCATTATTTCCGGTTCTTGCGTGATCTGGAAGGTGTTCGTCCGATCCATGGCGTGCGCTGATCGGCGGTGTTGGTGATGATGCAGAAGCAGAAGGTGGCGCTGGCGAACAGGCTGGGGCTGCGGCCGCGGCAGGTGGAGGTGTGGTTCCAGAACCGGAGGGCGAGGACGAAGCTGAAGCAGACGGAGGTGGACTGCGAGTACCTGAAGCGGTGGTGCGAGCGCCTCGCCGACGAGAACAAGCGCCTCGAGAAGGAGCTCGCCGACCTCAGGGCGCTCAAGGCCGCGCCCTCGCCGGCGTCCGCGTCCGCGATGCAGCCCTCCTCCTCCGCCGCCGCCACGCTCACCATGTGCCCCTCCTGCCGCCGCGTCGCCACCGCCGGCGCGCCGCACCAGCCTAACCACCAACAATGCCATCCCAAATCTAACACCACCATCTCCTCCTCCTCCACCGCCGCCGCCGCCGTCGCCGTCGCCGGCGGCAACGTGCTGCCCAGCCACTGCCAGTTCTTCCCGGCCGCCGCCGCCGCCGCCGACCGGACAAGCCAGAGCACGTGGAACGCCGCCGCGCCGCTCGTCACCAGAGAGCTCTTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022272