BGIOSGA022274

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Revision as of 13:15, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022274| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022274, complete gene.| tag = P0535G0...")
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Gene Name

BGIOSGA022274

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022274, complete gene.

LocusTag

P0535G04.14

Ensembl Transcript ID

BGIOSGA022274-TA

Ensembl Protein ID

BGIOSGA022274-PA

Length

3060

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2366910..2369969

Sequence Coding Region

2366910..2366979,2367791..2367891,2368422..2369261,2369347..2369493,2369589..2369969

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2366910..2369969 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2366910..2369969 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGATGCTGAATCTGATGCGCCTCATGTCCGTCAAGCGCCGCCGCCGCCAAGTCCAAGTTCCCCATGATGGATTGATTGCCTTACGGGCTAAAAGAAAGTGTTCACCCTGCCAACAAGATGGCGATTCTCAGGGCGCTGCTGACATAGAGATACCAGACCTTCCAGAGGACATCTGGCGTCTTATACATTCCTTGATGCCAATGCGAGCTGCTGCCCGAGCTGCCTGTGTGTCTCGTTCCTTTCTAAGTTCCTGGAGATGCCATCCCAACCTCAATTTCAGTAGTGAAGCATTTGGGTTGAATAGAAATGCATGTGGAAAGGAAGAATTGGCTGGACTTTTCTACAGCAAAGTCGACCACATTCTCAAAAGGCACTCAGGCATCGGCGTGAAAAAACTTACGATTAAGGTATATTCAGATTATAGTGGGAAGGGCTCTTCATATCTCAACAATTGGCTTCAGATTGCTGTTAAACCAGGGATTGAAGAACTCATAATTTCACTGACCCAGTTCCAGGCAAAGTACAATTTCCCATGCTCTCTTCTGTCGAATGGGAGTGGAGACTCAATCCAATATCTTCACCTTTCTAACTGTTCCTTCCACCCAACAGTCACACTTGGTGGCCTAAGAAGTCTGACGAGATTGTATCTCTGTTGTGTGCGTATTACGGAGAACGAGTTAAGCTGCTTTCTTTCCCATTCTCTTGCATTGGAGCAGTTGGAAATCAGGTACTGCGATAGGATTGTTTGCCTGAAGGTACCTTGCCTACTGCAGCGGCTCATCTCCCTGAAGGTGTTTGGGTGCGACAATCTGAAACTGATAGAAAATGAAGCTCCTAATGTCTCCATTTTTGCATTTCAAGGGGACAAAACGCAACTGAAACTTGGAGAAACTTTGCAAATGAAGAGCCTATGCATGGTTCGCTCTGGTTATGTTTATCATGCTCGTGCTGAACTTCCATCCATCAAGCCAAATCTTGAATCTCTTGCCATAAAATCATTCAAAGAGACGGCCTTTGCACCGAAGCTGTGTAGCAAATTCCTCTGCCTCAGGCACTTGAGCATTGCCCTTATTGGATTTTTCCCAGCCTATGACTATTTGTCCCTGGCTTCTTATATTCATGCTGCACCTTCTCTGGAGACTTTCTACCTGAATGTAATGCAGCGGTACGTGCAGAATGTTTCAATTTTTGCACATCCTGCAGATCTGAGATCAATACGAGAAGAGCAGCATCACAGCCTTAAGAGTGTGAGGGTCACATCATTCATCTCTGTAAAGAGCTTGGTTGAGCTGACATGCCATATCCTTGAGAGTACAACTTCCCTTGAGTGCTTGACATTGGATGCTTCTCAGACTGGTTTTAGGTGTGATACTCCTGGCAGCAAAATTGGCAAATGCCCCCCACTAGATAGGGACATTATCATGGAAGGTCACAGAGGGGTCTTGGCTATCAGAAGATACATCCAGCCTAGGGTACCTTCCACAGTGAAGCTGAATGTTTTGGAGCCCTGCAGCTGCCATTCTACTGAACTTTAG</cdnaseq>

Protein Sequence

<aaseq>MGMLNLMRLMSVKRRRRQVQVPHDGLIALRAKRKCSPCQQDGDSQGAADIEIPDLPEDIWRLIHSLMPMRAAARAACVSRSFLSSWRCHPNLNFSSEAFGLNRNACGKEELAGLFYSKVDHILKRHSGIGVKKLTIKVYSDYSGKGSSYLNNWLQIAVKPGIEELIISLTQFQAKYNFPCSLLSNGSGDSIQYLHLSNCSFHPTVTLGGLRSLTRLYLCCVRITENELSCFLSHSLALEQLEIRYCDRIVCLKVPCLLQRLISLKVFGCDNLKLIENEAPNVSIFAFQGDKTQLKLGETLQMKSLCMVRSGYVYHARAELPSIKPNLESLAIKSFKETAFAPKLCSKFLCLRHLSIALIGFFPAYDYLSLASYIHAAPSLETFYLNVMQRYVQNVSIFAHPADLRSIREEQHHSLKSVRVTSFISVKSLVELTCHILESTTSLECLTLDASQTGFRCDTPGSKIGKCPPLDRDIIMEGHRGVLAIRRYIQPRVPSTVKLNVLEPCSCHSTEL</aaseq>

Gene Sequence

<dnaseqindica>1..70#882..982#1513..2352#2438..2584#2680..3060#ATGGGGATGCTGAATCTGATGCGCCTCATGTCCGTCAAGCGCCGCCGCCGCCAAGTCCAAGTTCCCCATGGTAAAAGAACACCATCTCCTTCCTTATTTTTTCGATTATTTGAATCTGTATATATCTATAGTATGTACACAAACAAACAGAACCAAAAAACAAAAGATTTTACTGTTGTTAAGTGGTACCAATTTTTTTTTAACTACCTTCATCCCAAAAATATAAAAAATTAGTAATGGATGAGACACATTTTTTTTCCAGATTAATACGTTTTTATATTTTGGGACAGATAGAATAGTACAAATTTTTATACCTCAGAGTATCAGATATACCATCTTATTAAAAACTTGAGCATCATAAAAAGACATGTTTTTATTGAGTGCAAGGTAGGAGACCAAAAGAGGTGGTTTATCTATGATCACAATGGCTGGTGGCCTCCACCTTCTTGTTCCTTTTGCTATTTAACTAGATTGACCCGACGTACATGGGTAGAGACCATACTATTTATTATGCTATGTAAAATATGAAAAAAAAACTATATACATGCTGAACTTCAGGTTTTCCCCTTAAGTTGATAACAAGTTGGTTTCTTTTACAAAACTGTTAGTGTTGTTGCACAAAAGGGGACAACAGAAGAAAACAAAGATAACGGATTGCCATGTGTGCGATGGTGTGCTTGCTTGAGTTTTCTGTTTTATTACTCAAATGTATGTAAACCAATGTTTTCAAAATCGCTAATGTGGCATAATCAGATGCTTATATGGTATAATCGGCCACTTATATGACTTGAGTAGTATAAGGTTGGCGCATCCGTTCCTTGTACACGGCCTTGTAAAGCTTTTTTAAAACACTGATGTAAACCATGCATCTTGTGCTGCAGATGGATTGATTGCCTTACGGGCTAAAAGAAAGTGTTCACCCTGCCAACAAGATGGCGATTCTCAGGGCGCTGCTGACATAGAGATACCAGACCTTCCAGAGGTACACCATAAATAAAATGTTGATGATGAAACATCTTACTAGTAGTAGTGTAGTGCAAGTAAATTATGACGATTACTGCTTCAATTGCACAAATTGGTCCACCAACGCTATTAAAGTTTATGAACGGAGCACTTTGATGCTGTAACCTCCTACAGCCCTGCTGCATTGGAATCTTCTTTGTTTTGCTGCCATTGAATAGCAACATGCTATTAGACAATTAAACATCATTCCATCCATTCTTTCTGGCACAAATGCAAAGAAACAAATATGTGCTGAGCACTTAACACCTCATTTGGGTAAAGACCATATTTGCCTAGCAGAATTCAACTATACAATTCATAGTACAATTTTTGCCTAGCAGAATTCAACTATACAATTCATAGTACAATAGTACATAATCAGGCAGGTAGCATTGGACCGGTTAAGGTGTTACTCCATAAGTTATCCTTTCTTTCTTCCATCTAATTCAACCATTTGTCTTCACAATTAGTACAATGTTTAACTTCTCTCCCATATGCTTGTGCAAGCAGGACATCTGGCGTCTTATACATTCCTTGATGCCAATGCGAGCTGCTGCCCGAGCTGCCTGTGTGTCTCGTTCCTTTCTAAGTTCCTGGAGATGCCATCCCAACCTCAATTTCAGTAGTGAAGCATTTGGGTTGAATAGAAATGCATGTGGAAAGGAAGAATTGGCTGGACTTTTCTACAGCAAAGTCGACCACATTCTCAAAAGGCACTCAGGCATCGGCGTGAAAAAACTTACGATTAAGGTATATTCAGATTATAGTGGGAAGGGCTCTTCATATCTCAACAATTGGCTTCAGATTGCTGTTAAACCAGGGATTGAAGAACTCATAATTTCACTGACCCAGTTCCAGGCAAAGTACAATTTCCCATGCTCTCTTCTGTCGAATGGGAGTGGAGACTCAATCCAATATCTTCACCTTTCTAACTGTTCCTTCCACCCAACAGTCACACTTGGTGGCCTAAGAAGTCTGACGAGATTGTATCTCTGTTGTGTGCGTATTACGGAGAACGAGTTAAGCTGCTTTCTTTCCCATTCTCTTGCATTGGAGCAGTTGGAAATCAGGTACTGCGATAGGATTGTTTGCCTGAAGGTACCTTGCCTACTGCAGCGGCTCATCTCCCTGAAGGTGTTTGGGTGCGACAATCTGAAACTGATAGAAAATGAAGCTCCTAATGTCTCCATTTTTGCATTTCAAGGGGACAAAACGCAACTGAAACTTGGAGAAACTTTGCAAATGAAGAGCCTATGCATGGTTCGCTCTGGTTATGTTTATCATGCTCGTGCTGAACTTCCATCCATCAAGCCAAATCTTGAATCTCTTGCCATAAAATCATTCAAAGAGGTATGAGAAATTTTGCCTGACACATGAATGAGACTAGATTCTGTCTTATGGGTTGTAGCATAATTAATTTGACCTCTTTATGCAGACGGCCTTTGCACCGAAGCTGTGTAGCAAATTCCTCTGCCTCAGGCACTTGAGCATTGCCCTTATTGGATTTTTCCCAGCCTATGACTATTTGTCCCTGGCTTCTTATATTCATGCTGCACCTTCTCTGGAGACTTTCTACCTGAATGTGAGTTGCCGTTCATATATTATTACTGCTATGAATGAAAATTAGTAGTTGTGTGGTGGAAATGTCACTTAAAATTTCTCCCTTTCACATCCTAGGTAATGCAGCGGTACGTGCAGAATGTTTCAATTTTTGCACATCCTGCAGATCTGAGATCAATACGAGAAGAGCAGCATCACAGCCTTAAGAGTGTGAGGGTCACATCATTCATCTCTGTAAAGAGCTTGGTTGAGCTGACATGCCATATCCTTGAGAGTACAACTTCCCTTGAGTGCTTGACATTGGATGCTTCTCAGACTGGTTTTAGGTGTGATACTCCTGGCAGCAAAATTGGCAAATGCCCCCCACTAGATAGGGACATTATCATGGAAGGTCACAGAGGGGTCTTGGCTATCAGAAGATACATCCAGCCTAGGGTACCTTCCACAGTGAAGCTGAATGTTTTGGAGCCCTGCAGCTGCCATTCTACTGAACTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022274