Os09g0347300

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Revision as of 07:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0347300| Description = Exo70 exocyst complex subunit family protein| Version = NM_001069478.1 GI:115478698 GeneID:4346808| Length = 2176 bp...")
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Gene Name

Os09g0347300

Description

Exo70 exocyst complex subunit family protein

Version

NM_001069478.1 GI:115478698 GeneID:4346808

Length

2176 bp

Definition

Oryza sativa Japonica Group Os09g0347300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:11463763..11465938

Sequence Coding Region

11463823..11465619

Expression

GEO Profiles:Os09g0347300

Genome Context

<gbrowseImage1> name=NC_008402:11463763..11465938 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:11463763..11465938 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaccacacgaagcgatggcagcatcatggtggtaggggcggtcgatatcgattgcccccagcaccggctgtgcgggtaccgcgacttgatacggggcgtctccggcggcggcgccgccatgtcgcgctggccggaggcggcgcccttcgtcccgcagatcgccagtactggtggcgatggtggtgcagcggtggccggcggcggctggtcgagcgggagctcaagcccggctccatcgtcttgcagctcctcctcctcttggcgcgagggagactgctgctacgacgtctgctggtgttcttcttccacggtccacgagcttcgcagcatcgcggagcggatggtccgtgacggctacatcgaggggctcatcagggctttcggtggcgcggccactgccggagccgccggacggcgtggccccccagacgagcttctcctccataactggttctcgcagctcgacgtggagtgggtcctgctcctccatacctgcagcgaggaagaagaagacgaacacgtacgacgacctcctcctcttcccgtggaagatttgatggcgcttatggagcggtggatccgagccctcctaaccatggtgcaggttctctgcatcacgcagctcgagctccgcgccaagaagccaaccgtcgccggagtccggagagccatccagttcttcctgctccgccgcgacagcaagacggcgcacgcggactacgtgcagcaggtggtccagttcgcgcggttcgcggaggagagcatcctcaggatgctggccttcgtcgacgccgccactctcgccgtcgtcgaggaggacgacgacgaccaccgggtggccgaggcgctcccggggatgttgcaggtgtacgcctgcatctccgaggcctctccgaccgtgctcgccatgttcaaagaagcatccgatctcctcgcttccggctcctcccgccatggccaggaggcacaggttttcgacggcatggacggcatcttcctgcgcaagaggaagaagctgagcgacgcgatctgggacatgatggagaaggttcgatcctccttcttgcaggatggatgctggcaagtctcgccggaggcatcagcatcaggagtccatgagaccaccgtgctgatgatgaactacatcgcgcttctctggcgcaacgacgacgtcctcaccttcatcctgcaggatcaccacttcagcgtgttcgtctctcacacccagggcttcagctcggtcgtgaacctgatcaccgacatcatctcttgccttggccacaaattggaggaaattgcctcctccctttccaattccatcttggacccagcgttgcgttgcattttcttgctaaacaattggcagcttgtgttgcaccgcatcgaatccctggacctgccatcttgggccttgatagacagatgcaggacacggaggtacatagacacttacattgacgtcttctggtcgcctctgttgtgctgcatcttcatcggaaattcttctgatactcctcgaaagaaaacctacagacctgctttcggcttccgaagatacctgtctcttgaaaattttgagatagaattcagaaaaacctacgcgaagcacaagtttttcaaggttccagaccctaagcttcggcagagattacgtcaagccatcatccagaaaatcattccgcattatagcatgtatctggaggagcgagcagcaaggggaatgcacaatcgacctcccaaaattactcctgagcagttgaaggagctattagaagaattattcgaaggttga</cdnaseq>

Protein Sequence

<aaseq>METTRSDGSIMVVGAVDIDCPQHRLCGYRDLIRGVSGGGAAMSR WPEAAPFVPQIASTGGDGGAAVAGGGWSSGSSSPAPSSCSSSSSWREGDCCYDVCWCS SSTVHELRSIAERMVRDGYIEGLIRAFGGAATAGAAGRRGPPDELLLHNWFSQLDVEW VLLLHTCSEEEEDEHVRRPPPLPVEDLMALMERWIRALLTMVQVLCITQLELRAKKPT VAGVRRAIQFFLLRRDSKTAHADYVQQVVQFARFAEESILRMLAFVDAATLAVVEEDD DDHRVAEALPGMLQVYACISEASPTVLAMFKEASDLLASGSSRHGQEAQVFDGMDGIF LRKRKKLSDAIWDMMEKVRSSFLQDGCWQVSPEASASGVHETTVLMMNYIALLWRNDD VLTFILQDHHFSVFVSHTQGFSSVVNLITDIISCLGHKLEEIASSLSNSILDPALRCI FLLNNWQLVLHRIESLDLPSWALIDRCRTRRYIDTYIDVFWSPLLCCIFIGNSSDTPR KKTYRPAFGFRRYLSLENFEIEFRKTYAKHKFFKVPDPKLRQRLRQAIIQKIIPHYSM YLEERAARGMHNRPPKITPEQLKELLEELFEG</aaseq>

Gene Sequence

<dnaseqindica>61..1857#agccggtgttctactggcgactggcctcctcgagttcttgatcttggcggattgccgtccatggagaccacacgaagcgatggcagcatcatggtggtaggggcggtcgatatcgattgcccccagcaccggctgtgcgggtaccgcgacttgatacggggcgtctccggcggcggcgccgccatgtcgcgctggccggaggcggcgcccttcgtcccgcagatcgccagtactggtggcgatggtggtgcagcggtggccggcggcggctggtcgagcgggagctcaagcccggctccatcgtcttgcagctcctcctcctcttggcgcgagggagactgctgctacgacgtctgctggtgttcttcttccacggtccacgagcttcgcagcatcgcggagcggatggtccgtgacggctacatcgaggggctcatcagggctttcggtggcgcggccactgccggagccgccggacggcgtggccccccagacgagcttctcctccataactggttctcgcagctcgacgtggagtgggtcctgctcctccatacctgcagcgaggaagaagaagacgaacacgtacgacgacctcctcctcttcccgtggaagatttgatggcgcttatggagcggtggatccgagccctcctaaccatggtgcaggttctctgcatcacgcagctcgagctccgcgccaagaagccaaccgtcgccggagtccggagagccatccagttcttcctgctccgccgcgacagcaagacggcgcacgcggactacgtgcagcaggtggtccagttcgcgcggttcgcggaggagagcatcctcaggatgctggccttcgtcgacgccgccactctcgccgtcgtcgaggaggacgacgacgaccaccgggtggccgaggcgctcccggggatgttgcaggtgtacgcctgcatctccgaggcctctccgaccgtgctcgccatgttcaaagaagcatccgatctcctcgcttccggctcctcccgccatggccaggaggcacaggttttcgacggcatggacggcatcttcctgcgcaagaggaagaagctgagcgacgcgatctgggacatgatggagaaggttcgatcctccttcttgcaggatggatgctggcaagtctcgccggaggcatcagcatcaggagtccatgagaccaccgtgctgatgatgaactacatcgcgcttctctggcgcaacgacgacgtcctcaccttcatcctgcaggatcaccacttcagcgtgttcgtctctcacacccagggcttcagctcggtcgtgaacctgatcaccgacatcatctcttgccttggccacaaattggaggaaattgcctcctccctttccaattccatcttggacccagcgttgcgttgcattttcttgctaaacaattggcagcttgtgttgcaccgcatcgaatccctggacctgccatcttgggccttgatagacagatgcaggacacggaggtacatagacacttacattgacgtcttctggtcgcctctgttgtgctgcatcttcatcggaaattcttctgatactcctcgaaagaaaacctacagacctgctttcggcttccgaagatacctgtctcttgaaaattttgagatagaattcagaaaaacctacgcgaagcacaagtttttcaaggttccagaccctaagcttcggcagagattacgtcaagccatcatccagaaaatcattccgcattatagcatgtatctggaggagcgagcagcaaggggaatgcacaatcgacctcccaaaattactcctgagcagttgaaggagctattagaagaattattcgaaggttgaagcagatgaatttcagtggaataaatggctatatatttaattagcactcaccgttttgtcaccctagcttgggtcgtaggtttgaaggtttgtgctccggccagcaattaaggtgtggtttgtcttctttggactttggtgattatggtgagagtataattcaccaagttcctgcaaacagaaacttggttagtcttgccttattcgccggagaccttacttagtcttgcctgcttgtgaagatgggggttactaaaactgttgaaatgagttttacttaaatgttacaaatttaattatttccgttgtacagataatc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0347300, RefSeq:Os09g0347300